RNA–Protein interactions for RNA: ENST00000577435.5

GGA3-203, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-203ENST00000577435 LAS2Q8IYD9 372 aa13.18□□□□□ -0.3
GGA3-203ENST00000577435 SHISA5Q8N114 240 aa13.18□□□□□ -0.3
GGA3-203ENST00000577435 RBMXL3Q8N7X1 1067 aaKnown RBP13.18□□□□□ -0.3
GGA3-203ENST00000577435 METTL21AQ8WXB1 218 aa13.18□□□□□ -0.3
GGA3-203ENST00000577435 UBE2E3Q969T4 207 aa13.18□□□□□ -0.3
GGA3-203ENST00000577435 GAL3ST3Q96A11 431 aa13.18□□□□□ -0.3
GGA3-203ENST00000577435 TBC1D20Q96BZ9 403 aa13.18□□□□□ -0.3
GGA3-203ENST00000577435 MS4A6EQ96DS6 147 aa13.18□□□□□ -0.3
GGA3-203ENST00000577435 MTBPQ96DY7 904 aa13.18□□□□□ -0.3
GGA3-203ENST00000577435 IMMP1LQ96LU5 166 aa13.18□□□□□ -0.3
GGA3-203ENST00000577435 EPN3Q9H201 632 aa13.18□□□□□ -0.3
GGA3-203ENST00000577435 EPB41L4BQ9H329 900 aa13.18□□□□□ -0.3
GGA3-203ENST00000577435 LANCL2Q9NS86 450 aa13.18□□□□□ -0.3
GGA3-203ENST00000577435 RIC8BQ9NVN3 520 aa13.18□□□□□ -0.3
GGA3-203ENST00000577435 ZNF358Q9NW07 568 aa13.18□□□□□ -0.3
GGA3-203ENST00000577435 TMCO1Q9UM00 188 aa13.18□□□□□ -0.3
GGA3-203ENST00000577435 ZNF860A6NHJ4 632 aa13.17□□□□□ -0.3
GGA3-203ENST00000577435 ZNF500O60304 480 aaPredicted RBP13.17□□□□□ -0.3
GGA3-203ENST00000577435 SERPINA7P05543 415 aa13.17□□□□□ -0.3
GGA3-203ENST00000577435 FHP07954 510 aa13.17□□□□□ -0.3
GGA3-203ENST00000577435 GFAPP14136 432 aa13.17□□□□□ -0.3
GGA3-203ENST00000577435 HNRNPH1P31943 449 aaKnown RBP13.17□□□□□ -0.3
GGA3-203ENST00000577435 HNF4AP41235 474 aa13.17□□□□□ -0.3
GGA3-203ENST00000577435 RAB8AP61006 207 aa13.17□□□□□ -0.3
GGA3-203ENST00000577435 AP2B1P63010 937 aa13.17□□□□□ -0.3
GGA3-203ENST00000577435 RHAGQ02094 409 aa13.17□□□□□ -0.3
GGA3-203ENST00000577435 RAPSNQ13702 412 aa13.17□□□□□ -0.3
GGA3-203ENST00000577435 PCOLCEQ15113 449 aa13.17□□□□□ -0.3
GGA3-203ENST00000577435 AGAP7PQ5VUJ5 663 aa13.17□□□□□ -0.3
GGA3-203ENST00000577435 VN1R5Q7Z5H4 357 aa13.17□□□□□ -0.3
GGA3-203ENST00000577435 KBTBD2Q8IY47 623 aa13.17□□□□□ -0.3
GGA3-203ENST00000577435 OR5T3Q8NGG3 340 aa13.17□□□□□ -0.3
GGA3-203ENST00000577435 TM9SF4Q92544 642 aa13.17□□□□□ -0.3
GGA3-203ENST00000577435 PNPLA2Q96AD5 504 aa13.17□□□□□ -0.3
GGA3-203ENST00000577435 PEX11GQ96HA9 241 aa13.17□□□□□ -0.3
GGA3-203ENST00000577435 AGAP4Q96P64 663 aa13.17□□□□□ -0.3
GGA3-203ENST00000577435 LMF1Q96S06 567 aa13.17□□□□□ -0.3
GGA3-203ENST00000577435 MRPL57Q9BQC6 102 aaKnown RBP13.17□□□□□ -0.3
GGA3-203ENST00000577435 TUBB6Q9BUF5 446 aa13.17□□□□□ -0.3
GGA3-203ENST00000577435 NPLQ9BXD5 320 aaPredicted RBP13.17□□□□□ -0.3
GGA3-203ENST00000577435 ZNF160Q9HCG1 818 aa13.17□□□□□ -0.3
GGA3-203ENST00000577435 C19orf25Q9UFG5 118 aaPredicted RBP13.17□□□□□ -0.3
GGA3-203ENST00000577435 ADGRE2Q9UHX3 823 aa13.17□□□□□ -0.3
GGA3-203ENST00000577435 TSC22D4Q9Y3Q8 395 aa13.17□□□□□ -0.3
GGA3-203ENST00000577435 TENM4Q6N022 2769 aa13.17□□□□□ -0.3
GGA3-203ENST00000577435 MAGEB17A8MXT2 336 aa13.16□□□□□ -0.3
GGA3-203ENST00000577435 C4orf51C9J302 202 aa13.16□□□□□ -0.3
GGA3-203ENST00000577435 STX16-NPEPL1H3BU86 382 aa13.16□□□□□ -0.3
GGA3-203ENST00000577435 STX16O14662 325 aa13.16□□□□□ -0.3
GGA3-203ENST00000577435 UGDHO60701 494 aa13.16□□□□□ -0.3
GGA3-203ENST00000577435 SORBS2O94875 1100 aaKnown RBP13.16□□□□□ -0.3
GGA3-203ENST00000577435 B3GALT4O96024 378 aa13.16□□□□□ -0.3
GGA3-203ENST00000577435 PRR35P0CG20 571 aa13.16□□□□□ -0.3
GGA3-203ENST00000577435 MYBL2P10244 700 aa13.16□□□□□ -0.3
GGA3-203ENST00000577435 RNH1P13489 461 aaKnown RBP13.16□□□□□ -0.3
GGA3-203ENST00000577435 JAK1P23458 1154 aa13.16□□□□□ -0.3
GGA3-203ENST00000577435 SERPINB1P30740 379 aa13.16□□□□□ -0.3
GGA3-203ENST00000577435 EEF1A2Q05639 463 aaKnown RBP13.16□□□□□ -0.3
GGA3-203ENST00000577435 MINDY4Q4G0A6 757 aa13.16□□□□□ -0.3
GGA3-203ENST00000577435 NADK2Q4G0N4 442 aa13.16□□□□□ -0.3
GGA3-203ENST00000577435 TEX35Q5T0J7 233 aa13.16□□□□□ -0.3
GGA3-203ENST00000577435 IRAK1BP1Q5VVH5 260 aa13.16□□□□□ -0.3
GGA3-203ENST00000577435 LIPJQ5W064 366 aa13.16□□□□□ -0.3
GGA3-203ENST00000577435 FAAH2Q6GMR7 532 aa13.16□□□□□ -0.3
GGA3-203ENST00000577435 GRHL2Q6ISB3 625 aa13.16□□□□□ -0.3
GGA3-203ENST00000577435 JMJD6Q6NYC1 403 aaPredicted RBP13.16□□□□□ -0.3
GGA3-203ENST00000577435 MED27Q6P2C8 311 aa13.16□□□□□ -0.3
GGA3-203ENST00000577435 CPEB2Q7Z5Q1 589 aaKnown RBP13.16□□□□□ -0.3
GGA3-203ENST00000577435 LCA5Q86VQ0 697 aa13.16□□□□□ -0.3
GGA3-203ENST00000577435 TMEM151AQ8N4L1 468 aa13.16□□□□□ -0.3
GGA3-203ENST00000577435 TEX9Q8N6V9 391 aa13.16□□□□□ -0.3
GGA3-203ENST00000577435 SRFBP1Q8NEF9 429 aaKnown RBP13.16□□□□□ -0.3
GGA3-203ENST00000577435 OR2L5Q8NG80 312 aa13.16□□□□□ -0.3
GGA3-203ENST00000577435 ZNF473Q8WTR7 871 aaKnown RBP13.16□□□□□ -0.3
GGA3-203ENST00000577435 PSMF1Q92530 271 aa13.16□□□□□ -0.3
GGA3-203ENST00000577435 THOC3Q96J01 351 aaKnown RBP13.16□□□□□ -0.3
GGA3-203ENST00000577435 FAR2Q96K12 515 aa13.16□□□□□ -0.3
GGA3-203ENST00000577435 QRFPRQ96P65 431 aa13.16□□□□□ -0.3
GGA3-203ENST00000577435 CCDC77Q9BR77 488 aa13.16□□□□□ -0.3
GGA3-203ENST00000577435 REXO4Q9GZR2 422 aaKnown RBP13.16□□□□□ -0.3
GGA3-203ENST00000577435 SHANK1Q9Y566 2161 aa13.15□□□□□ -0.3
GGA3-203ENST00000577435 A0A088AWK7 358 aa13.15□□□□□ -0.3
GGA3-203ENST00000577435 IQANK1A0A1B0GTG1 560 aa13.15□□□□□ -0.3
GGA3-203ENST00000577435 OR2W5A6NFC9 320 aa13.15□□□□□ -0.3
GGA3-203ENST00000577435 E2F3O00716 465 aa13.15□□□□□ -0.3
GGA3-203ENST00000577435 ERI3O43414 337 aaKnown RBP13.15□□□□□ -0.3
GGA3-203ENST00000577435 WISP1O95388 367 aa13.15□□□□□ -0.3
GGA3-203ENST00000577435 ZNF10P21506 573 aaPredicted RBP13.15□□□□□ -0.3
GGA3-203ENST00000577435 PIK3CGP48736 1102 aa13.15□□□□□ -0.3
GGA3-203ENST00000577435 OLR1P78380 273 aa13.15□□□□□ -0.3
GGA3-203ENST00000577435 BTN3A2P78410 334 aa13.15□□□□□ -0.3
GGA3-203ENST00000577435 TGM3Q08188 693 aa13.15□□□□□ -0.3
GGA3-203ENST00000577435 GTF2H2Q13888 395 aa13.15□□□□□ -0.3
GGA3-203ENST00000577435 NSDHLQ15738 373 aa13.15□□□□□ -0.3
GGA3-203ENST00000577435 MFSD4BQ5TF39 518 aa13.15□□□□□ -0.3
GGA3-203ENST00000577435 SLC6A19Q695T7 634 aa13.15□□□□□ -0.3
GGA3-203ENST00000577435 GTF2H2CQ6P1K8 395 aa13.15□□□□□ -0.3
GGA3-203ENST00000577435 ABHD17CQ6PCB6 329 aa13.15□□□□□ -0.3
GGA3-203ENST00000577435 ISLR2Q6UXK2 745 aa13.15□□□□□ -0.3
GGA3-203ENST00000577435 QSOX2Q6ZRP7 698 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms