RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 FOLR1P15328 257 aa22.88■■□□□ 1.25
ATPAF1-213ENST00000574428 PHF19Q5T6S3 580 aa22.88■■□□□ 1.25
ATPAF1-213ENST00000574428 GALNT18Q6P9A2 607 aa22.88■■□□□ 1.25
ATPAF1-213ENST00000574428 TRIM40Q6P9F5 258 aa22.88■■□□□ 1.25
ATPAF1-213ENST00000574428 ABHD17CQ6PCB6 329 aa22.88■■□□□ 1.25
ATPAF1-213ENST00000574428 PIP4P1Q86T03 277 aa22.88■■□□□ 1.25
ATPAF1-213ENST00000574428 SLITRK4Q8IW52 837 aa22.88■■□□□ 1.25
ATPAF1-213ENST00000574428 ZNF655Q8N720 491 aaPredicted RBP22.88■■□□□ 1.25
ATPAF1-213ENST00000574428 N4BP2L2Q92802 583 aaPredicted RBP22.88■■□□□ 1.25
ATPAF1-213ENST00000574428 TSSK3Q96PN8 268 aa22.88■■□□□ 1.25
ATPAF1-213ENST00000574428 SIRT5Q9NXA8 310 aa22.88■■□□□ 1.25
ATPAF1-213ENST00000574428 MRPS2Q9Y399 296 aaKnown RBP22.88■■□□□ 1.25
ATPAF1-213ENST00000574428 ADAMTS20P59510 1910 aa22.87■■□□□ 1.25
ATPAF1-213ENST00000574428 GNG14A0A1W2PPG7 69 aa22.87■■□□□ 1.25
ATPAF1-213ENST00000574428 C9JVG2 144 aa22.87■■□□□ 1.25
ATPAF1-213ENST00000574428 SRPX2O60687 465 aaPredicted RBP22.87■■□□□ 1.25
ATPAF1-213ENST00000574428 ACPPP15309 386 aa22.87■■□□□ 1.25
ATPAF1-213ENST00000574428 PIK3R1P27986 724 aa22.87■■□□□ 1.25
ATPAF1-213ENST00000574428 SSR2P43308 183 aa22.87■■□□□ 1.25
ATPAF1-213ENST00000574428 UFM1P61960 85 aa22.87■■□□□ 1.25
ATPAF1-213ENST00000574428 NHLH1Q02575 133 aa22.87■■□□□ 1.25
ATPAF1-213ENST00000574428 PDCD4Q53EL6 469 aaKnown RBP22.87■■□□□ 1.25
ATPAF1-213ENST00000574428 OR4C11Q6IEV9 310 aa22.87■■□□□ 1.25
ATPAF1-213ENST00000574428 B3GNT8Q7Z7M8 397 aa22.87■■□□□ 1.25
ATPAF1-213ENST00000574428 C10orf67Q8IYJ2 551 aa22.87■■□□□ 1.25
ATPAF1-213ENST00000574428 AMER3Q8N944 861 aa22.87■■□□□ 1.25
ATPAF1-213ENST00000574428 CDC26Q8NHZ8 85 aa22.87■■□□□ 1.25
ATPAF1-213ENST00000574428 UTP15Q8TED0 518 aaKnown RBP22.87■■□□□ 1.25
ATPAF1-213ENST00000574428 GAL3ST3Q96A11 431 aa22.87■■□□□ 1.25
ATPAF1-213ENST00000574428 TEX37Q96LM6 180 aa22.87■■□□□ 1.25
ATPAF1-213ENST00000574428 KCNC2Q96PR1 638 aa22.87■■□□□ 1.25
ATPAF1-213ENST00000574428 TEFMQ96QE5 360 aaKnown RBP22.87■■□□□ 1.25
ATPAF1-213ENST00000574428 NLNQ9BYT8 704 aa22.87■■□□□ 1.25
ATPAF1-213ENST00000574428 ACTL8Q9H568 366 aa22.87■■□□□ 1.25
ATPAF1-213ENST00000574428 IRAK4Q9NWZ3 460 aa22.87■■□□□ 1.25
ATPAF1-213ENST00000574428 PRPS2P11908 318 aa22.86■■□□□ 1.25
ATPAF1-213ENST00000574428 TPP2P29144 1249 aaPredicted RBP22.86■■□□□ 1.25
ATPAF1-213ENST00000574428 AGKQ53H12 422 aa22.86■■□□□ 1.25
ATPAF1-213ENST00000574428 TMTC4Q5T4D3 741 aa22.86■■□□□ 1.25
ATPAF1-213ENST00000574428 FAM91A1Q658Y4 838 aa22.86■■□□□ 1.25
ATPAF1-213ENST00000574428 TMEM214Q6NUQ4 689 aaKnown RBP22.86■■□□□ 1.25
ATPAF1-213ENST00000574428 ZNF793Q6ZN11 406 aa22.86■■□□□ 1.25
ATPAF1-213ENST00000574428 NUDT13Q86X67 352 aa22.86■■□□□ 1.25
ATPAF1-213ENST00000574428 PARP9Q8IXQ6 854 aa22.86■■□□□ 1.25
ATPAF1-213ENST00000574428 EGLN2Q96KS0 407 aa22.86■■□□□ 1.25
ATPAF1-213ENST00000574428 CCDC167Q9P0B6 97 aa22.86■■□□□ 1.25
ATPAF1-213ENST00000574428 TMEM150CB9EJG8 249 aa22.86■■□□□ 1.25
ATPAF1-213ENST00000574428 ANKRD28O15084 1053 aa22.86■■□□□ 1.25
ATPAF1-213ENST00000574428 ZSCAN9O15535 394 aaPredicted RBP22.86■■□□□ 1.25
ATPAF1-213ENST00000574428 KLHL18O94889 574 aa22.86■■□□□ 1.25
ATPAF1-213ENST00000574428 CCNYL2Q5T2Q4 361 aa22.86■■□□□ 1.25
ATPAF1-213ENST00000574428 PAGE2Q7Z2X7 111 aa22.86■■□□□ 1.25
ATPAF1-213ENST00000574428 OR8K5Q8NH50 307 aa22.86■■□□□ 1.25
ATPAF1-213ENST00000574428 NUDT8Q8WV74 236 aa22.86■■□□□ 1.25
ATPAF1-213ENST00000574428 ZNF285Q96NJ3 590 aa22.86■■□□□ 1.25
ATPAF1-213ENST00000574428 PRDM7Q9NQW5 492 aa22.86■■□□□ 1.25
ATPAF1-213ENST00000574428 ARL8BQ9NVJ2 186 aa22.86■■□□□ 1.25
ATPAF1-213ENST00000574428 MCM8Q9UJA3 840 aa22.86■■□□□ 1.25
ATPAF1-213ENST00000574428 SLC22A3O75751 556 aa22.85■■□□□ 1.25
ATPAF1-213ENST00000574428 MRPL19P49406 292 aaKnown RBP22.85■■□□□ 1.25
ATPAF1-213ENST00000574428 TGM3Q08188 693 aa22.85■■□□□ 1.25
ATPAF1-213ENST00000574428 PRTGQ2VWP7 1150 aa22.85■■□□□ 1.25
ATPAF1-213ENST00000574428 MANEAQ5SRI9 462 aa22.85■■□□□ 1.25
ATPAF1-213ENST00000574428 GK5Q6ZS86 529 aa22.85■■□□□ 1.25
ATPAF1-213ENST00000574428 KRTCAP2Q8N6L1 136 aa22.85■■□□□ 1.25
ATPAF1-213ENST00000574428 SRFBP1Q8NEF9 429 aaKnown RBP22.85■■□□□ 1.25
ATPAF1-213ENST00000574428 SPRTNQ9H040 489 aaPredicted RBP22.85■■□□□ 1.25
ATPAF1-213ENST00000574428 MRGBPQ9NV56 204 aa22.85■■□□□ 1.25
ATPAF1-213ENST00000574428 ZNF292O60281 2723 aa22.85■■□□□ 1.25
ATPAF1-213ENST00000574428 URADA6NGE7 173 aa22.84■■□□□ 1.25
ATPAF1-213ENST00000574428 SLC22A2O15244 555 aa22.84■■□□□ 1.25
ATPAF1-213ENST00000574428 RFPL3O75679 317 aa22.84■■□□□ 1.25
ATPAF1-213ENST00000574428 UNC5CO95185 931 aa22.84■■□□□ 1.25
ATPAF1-213ENST00000574428 LRATO95237 230 aa22.84■■□□□ 1.25
ATPAF1-213ENST00000574428 CBX6O95503 412 aa22.84■■□□□ 1.25
ATPAF1-213ENST00000574428 PDX1P52945 283 aa22.84■■□□□ 1.25
ATPAF1-213ENST00000574428 BTN3A2P78410 334 aa22.84■■□□□ 1.25
ATPAF1-213ENST00000574428 IRX1P78414 480 aaPredicted RBP22.84■■□□□ 1.25
ATPAF1-213ENST00000574428 DEFB134Q4QY38 66 aa22.84■■□□□ 1.25
ATPAF1-213ENST00000574428 ABHD13Q7L211 337 aa22.84■■□□□ 1.25
ATPAF1-213ENST00000574428 FUNDC1Q8IVP5 155 aa22.84■■□□□ 1.25
ATPAF1-213ENST00000574428 POU5F2Q8N7G0 328 aa22.84■■□□□ 1.25
ATPAF1-213ENST00000574428 PROKR1Q8TCW9 393 aa22.84■■□□□ 1.25
ATPAF1-213ENST00000574428 GFM2Q969S9 779 aaKnown RBP22.84■■□□□ 1.25
ATPAF1-213ENST00000574428 TBCDQ9BTW9 1192 aa22.84■■□□□ 1.25
ATPAF1-213ENST00000574428 DDX31Q9H8H2 851 aaKnown RBP22.84■■□□□ 1.25
ATPAF1-213ENST00000574428 TXLNGQ9NUQ3 528 aa22.84■■□□□ 1.25
ATPAF1-213ENST00000574428 ZIM2Q9NZV7 527 aa22.84■■□□□ 1.25
ATPAF1-213ENST00000574428 A0A0A6YYD5 115 aa22.84■■□□□ 1.25
ATPAF1-213ENST00000574428 ARHGAP10A1A4S6 786 aa22.84■■□□□ 1.25
ATPAF1-213ENST00000574428 TMPRSS11DO60235 418 aa22.84■■□□□ 1.25
ATPAF1-213ENST00000574428 SMIM10L1P0DMW3 83 aa22.84■■□□□ 1.25
ATPAF1-213ENST00000574428 HIST1H1TP22492 207 aaPredicted RBP22.84■■□□□ 1.25
ATPAF1-213ENST00000574428 ATP5A1P25705 553 aaKnown RBP22.84■■□□□ 1.25
ATPAF1-213ENST00000574428 CERS1P27544 350 aa22.84■■□□□ 1.25
ATPAF1-213ENST00000574428 ADSLP30566 484 aaPredicted RBP22.84■■□□□ 1.25
ATPAF1-213ENST00000574428 ZNF763Q0D2J5 394 aa22.84■■□□□ 1.25
ATPAF1-213ENST00000574428 PRSS41Q7RTY9 318 aa22.84■■□□□ 1.25
ATPAF1-213ENST00000574428 ARHGEF39Q8N4T4 335 aa22.84■■□□□ 1.25
ATPAF1-213ENST00000574428 DEFB124Q8NES8 71 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms