RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 PTGR2Q8N8N7 351 aaPredicted RBP15.23■□□□□ 0.03
COMMD4-206ENST00000562610 SEC16BQ96JE7 1060 aa15.23■□□□□ 0.03
COMMD4-206ENST00000562610 OR1F2PQ96R84 312 aa15.23■□□□□ 0.03
COMMD4-206ENST00000562610 SMAD5Q99717 465 aaKnown RBP15.23■□□□□ 0.03
COMMD4-206ENST00000562610 CCDC77Q9BR77 488 aa15.23■□□□□ 0.03
COMMD4-206ENST00000562610 AICDAQ9GZX7 198 aa15.23■□□□□ 0.03
COMMD4-206ENST00000562610 EPN3Q9H201 632 aa15.23■□□□□ 0.03
COMMD4-206ENST00000562610 RIC8BQ9NVN3 520 aa15.23■□□□□ 0.03
COMMD4-206ENST00000562610 C19orf25Q9UFG5 118 aaPredicted RBP15.23■□□□□ 0.03
COMMD4-206ENST00000562610 TBK1Q9UHD2 729 aa15.23■□□□□ 0.03
COMMD4-206ENST00000562610 SPENQ96T58 3664 aaKnown RBP15.22■□□□□ 0.03
COMMD4-206ENST00000562610 IGHV1-45A0A0A0MS14 117 aa15.22■□□□□ 0.03
COMMD4-206ENST00000562610 OR2W5A6NFC9 320 aa15.22■□□□□ 0.03
COMMD4-206ENST00000562610 J3QKU1 62 aa15.22■□□□□ 0.03
COMMD4-206ENST00000562610 PSMD12O00232 456 aaPredicted RBP15.22■□□□□ 0.03
COMMD4-206ENST00000562610 CHST10O43529 356 aa15.22■□□□□ 0.03
COMMD4-206ENST00000562610 KLK8O60259 260 aa15.22■□□□□ 0.03
COMMD4-206ENST00000562610 SIX3O95343 332 aaPredicted RBP15.22■□□□□ 0.03
COMMD4-206ENST00000562610 FHP07954 510 aa15.22■□□□□ 0.03
COMMD4-206ENST00000562610 JAK1P23458 1154 aa15.22■□□□□ 0.03
COMMD4-206ENST00000562610 EEF1DP29692 281 aaKnown RBP15.22■□□□□ 0.03
COMMD4-206ENST00000562610 BTN3A2P78410 334 aa15.22■□□□□ 0.03
COMMD4-206ENST00000562610 TLE1Q04724 770 aa15.22■□□□□ 0.03
COMMD4-206ENST00000562610 NADK2Q4G0N4 442 aa15.22■□□□□ 0.03
COMMD4-206ENST00000562610 GRHL2Q6ISB3 625 aa15.22■□□□□ 0.03
COMMD4-206ENST00000562610 MED27Q6P2C8 311 aa15.22■□□□□ 0.03
COMMD4-206ENST00000562610 TRIM40Q6P9F5 258 aa15.22■□□□□ 0.03
COMMD4-206ENST00000562610 UBE2E3Q969T4 207 aa15.22■□□□□ 0.03
COMMD4-206ENST00000562610 TBC1D20Q96BZ9 403 aa15.22■□□□□ 0.03
COMMD4-206ENST00000562610 MS4A6EQ96DS6 147 aa15.22■□□□□ 0.03
COMMD4-206ENST00000562610 PHF21BQ96EK2 531 aa15.22■□□□□ 0.03
COMMD4-206ENST00000562610 MFRPQ9BY79 579 aa15.22■□□□□ 0.03
COMMD4-206ENST00000562610 REXO4Q9GZR2 422 aaKnown RBP15.22■□□□□ 0.03
COMMD4-206ENST00000562610 LHPPQ9H008 270 aa15.22■□□□□ 0.03
COMMD4-206ENST00000562610 RHBGQ9H310 441 aa15.22■□□□□ 0.03
COMMD4-206ENST00000562610 ZNF552Q9H707 407 aaPredicted RBP15.22■□□□□ 0.03
COMMD4-206ENST00000562610 ANKZF1Q9H8Y5 726 aa15.22■□□□□ 0.03
COMMD4-206ENST00000562610 ACTR8Q9H981 624 aa15.22■□□□□ 0.03
COMMD4-206ENST00000562610 COPS7BQ9H9Q2 264 aaPredicted RBP15.22■□□□□ 0.03
COMMD4-206ENST00000562610 ZNF490Q9ULM2 529 aaPredicted RBP15.22■□□□□ 0.03
COMMD4-206ENST00000562610 TMCO1Q9UM00 188 aa15.22■□□□□ 0.03
COMMD4-206ENST00000562610 TNPO3Q9Y5L0 923 aaKnown RBP15.22■□□□□ 0.03
COMMD4-206ENST00000562610 A0A088AWK7 358 aa15.21■□□□□ 0.03
COMMD4-206ENST00000562610 IGHV3-20A0A0C4DH32 117 aa15.21■□□□□ 0.03
COMMD4-206ENST00000562610 LRIT2A6NDA9 550 aa15.21■□□□□ 0.03
COMMD4-206ENST00000562610 DNAJB6O75190 326 aa15.21■□□□□ 0.03
COMMD4-206ENST00000562610 CYC1P08574 325 aa15.21■□□□□ 0.03
COMMD4-206ENST00000562610 SMIM10L1P0DMW3 83 aa15.21■□□□□ 0.03
COMMD4-206ENST00000562610 RNH1P13489 461 aaKnown RBP15.21■□□□□ 0.03
COMMD4-206ENST00000562610 ZNF10P21506 573 aaPredicted RBP15.21■□□□□ 0.03
COMMD4-206ENST00000562610 IL10P22301 178 aa15.21■□□□□ 0.03
COMMD4-206ENST00000562610 PIK3CGP48736 1102 aa15.21■□□□□ 0.03
COMMD4-206ENST00000562610 PLA2G16P53816 162 aa15.21■□□□□ 0.03
COMMD4-206ENST00000562610 SOX8P57073 446 aa15.21■□□□□ 0.03
COMMD4-206ENST00000562610 Q0VFX4 171 aa15.21■□□□□ 0.03
COMMD4-206ENST00000562610 DDX39BQ13838 428 aaKnown RBP15.21■□□□□ 0.03
COMMD4-206ENST00000562610 GTF2H2Q13888 395 aa15.21■□□□□ 0.03
COMMD4-206ENST00000562610 ABRAXAS2Q15018 415 aa15.21■□□□□ 0.03
COMMD4-206ENST00000562610 PCOLCEQ15113 449 aa15.21■□□□□ 0.03
COMMD4-206ENST00000562610 PCBP2Q15366 365 aaKnown RBP eCLIP15.21■□□□□ 0.031e-11■■■■■ 48
COMMD4-206ENST00000562610 GTF2H2CQ6P1K8 395 aa15.21■□□□□ 0.03
COMMD4-206ENST00000562610 TMEM205Q6UW68 189 aa15.21■□□□□ 0.03
COMMD4-206ENST00000562610 GOLGA7Q7Z5G4 137 aa15.21■□□□□ 0.03
COMMD4-206ENST00000562610 HPS6Q86YV9 775 aa15.21■□□□□ 0.03
COMMD4-206ENST00000562610 KBTBD2Q8IY47 623 aa15.21■□□□□ 0.03
COMMD4-206ENST00000562610 OR2L5Q8NG80 312 aa15.21■□□□□ 0.03
COMMD4-206ENST00000562610 TM9SF4Q92544 642 aa15.21■□□□□ 0.03
COMMD4-206ENST00000562610 SMIM10Q96HG1 83 aa15.21■□□□□ 0.03
COMMD4-206ENST00000562610 MRPL57Q9BQC6 102 aaKnown RBP15.21■□□□□ 0.03
COMMD4-206ENST00000562610 MRPL46Q9H2W6 279 aaKnown RBP15.21■□□□□ 0.03
COMMD4-206ENST00000562610 LANCL2Q9NS86 450 aa15.21■□□□□ 0.03
COMMD4-206ENST00000562610 LUZP4Q9P127 313 aa15.21■□□□□ 0.03
COMMD4-206ENST00000562610 C5AR2Q9P296 337 aa15.21■□□□□ 0.03
COMMD4-206ENST00000562610 FETUBQ9UGM5 382 aa15.21■□□□□ 0.03
COMMD4-206ENST00000562610 FASNP49327 2511 aaKnown RBP15.21■□□□□ 0.03
COMMD4-206ENST00000562610 LOC102723996A0A087X1L8 192 aa15.2■□□□□ 0.02
COMMD4-206ENST00000562610 A0A1W2PQ72 361 aa15.2■□□□□ 0.02
COMMD4-206ENST00000562610 SMIM23A6NLE4 172 aa15.2■□□□□ 0.02
COMMD4-206ENST00000562610 GOLGA8RI6L899 631 aa15.2■□□□□ 0.02
COMMD4-206ENST00000562610 E2F3O00716 465 aa15.2■□□□□ 0.02
COMMD4-206ENST00000562610 B3GALT2O43825 422 aa15.2■□□□□ 0.02
COMMD4-206ENST00000562610 B4GALT2O60909 372 aa15.2■□□□□ 0.02
COMMD4-206ENST00000562610 SH3BGRLO75368 114 aa15.2■□□□□ 0.02
COMMD4-206ENST00000562610 WFS1O76024 890 aa15.2■□□□□ 0.02
COMMD4-206ENST00000562610 SEC24DO94855 1032 aaPredicted RBP15.2■□□□□ 0.02
COMMD4-206ENST00000562610 SLU7O95391 586 aaKnown RBP15.2■□□□□ 0.02
COMMD4-206ENST00000562610 SHBGP04278 402 aa15.2■□□□□ 0.02
COMMD4-206ENST00000562610 CASP2P42575 452 aa15.2■□□□□ 0.02
COMMD4-206ENST00000562610 RHAGQ02094 409 aa15.2■□□□□ 0.02
COMMD4-206ENST00000562610 TGM3Q08188 693 aa15.2■□□□□ 0.02
COMMD4-206ENST00000562610 E2F2Q14209 437 aa15.2■□□□□ 0.02
COMMD4-206ENST00000562610 NSDHLQ15738 373 aa15.2■□□□□ 0.02
COMMD4-206ENST00000562610 AGAP7PQ5VUJ5 663 aa15.2■□□□□ 0.02
COMMD4-206ENST00000562610 TIFABQ6ZNK6 161 aa15.2■□□□□ 0.02
COMMD4-206ENST00000562610 CPEB2Q7Z5Q1 589 aaKnown RBP15.2■□□□□ 0.02
COMMD4-206ENST00000562610 ANKRD37Q7Z713 158 aa15.2■□□□□ 0.02
COMMD4-206ENST00000562610 LAS2Q8IYD9 372 aa15.2■□□□□ 0.02
COMMD4-206ENST00000562610 CA13Q8N1Q1 262 aa15.2■□□□□ 0.02
COMMD4-206ENST00000562610 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.2■□□□□ 0.02
COMMD4-206ENST00000562610 TSLPQ969D9 159 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms