RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 HYAL2Q12891 473 aa12.32□□□□□ -0.44
SNX1-211ENST00000560829 GPR18Q14330 331 aa12.32□□□□□ -0.44
SNX1-211ENST00000560829 LRRC36Q1X8D7 754 aa12.32□□□□□ -0.44
SNX1-211ENST00000560829 MPEG1Q2M385 716 aa12.32□□□□□ -0.44
SNX1-211ENST00000560829 SFT2D3Q587I9 215 aa12.32□□□□□ -0.44
SNX1-211ENST00000560829 ZNF621Q6ZSS3 439 aa12.32□□□□□ -0.44
SNX1-211ENST00000560829 ZNF551Q7Z340 670 aaPredicted RBP12.32□□□□□ -0.44
SNX1-211ENST00000560829 FAM20CQ8IXL6 584 aa12.32□□□□□ -0.44
SNX1-211ENST00000560829 C10orf111Q8N326 155 aa12.32□□□□□ -0.44
SNX1-211ENST00000560829 NATD1Q8N6N6 113 aa12.32□□□□□ -0.44
SNX1-211ENST00000560829 MFSD9Q8NBP5 474 aa12.32□□□□□ -0.44
SNX1-211ENST00000560829 PJA1Q8NG27 643 aa12.32□□□□□ -0.44
SNX1-211ENST00000560829 JPH3Q8WXH2 748 aaPredicted RBP12.32□□□□□ -0.44
SNX1-211ENST00000560829 FAM120BQ96EK7 910 aaKnown RBP12.32□□□□□ -0.44
SNX1-211ENST00000560829 AICDAQ9GZX7 198 aa12.32□□□□□ -0.44
SNX1-211ENST00000560829 AASDHPPTQ9NRN7 309 aa12.32□□□□□ -0.44
SNX1-211ENST00000560829 CPNE7Q9UBL6 633 aa12.32□□□□□ -0.44
SNX1-211ENST00000560829 ZNF282Q9UDV7 671 aaPredicted RBP12.32□□□□□ -0.44
SNX1-211ENST00000560829 DTNAQ9Y4J8 743 aa12.32□□□□□ -0.44
SNX1-211ENST00000560829 PCDHGA4Q9Y5G9 962 aa12.32□□□□□ -0.44
SNX1-211ENST00000560829 KLK4Q9Y5K2 254 aa12.32□□□□□ -0.44
SNX1-211ENST00000560829 TRBV23OR9-2A0A075B6M9 112 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 ARHGAP10A1A4S6 786 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 RTCAO00442 366 aaKnown RBP12.31□□□□□ -0.44
SNX1-211ENST00000560829 TNFSF14O43557 240 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 GMNNO75496 209 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 FKBP9O95302 570 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 CPSF4O95639 269 aaKnown RBP12.31□□□□□ -0.44
SNX1-211ENST00000560829 VIPP01282 170 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 ABCB1P08183 1280 aaPredicted RBP12.31□□□□□ -0.44
SNX1-211ENST00000560829 FCGR1AP12314 374 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 DDCP20711 480 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 MAPK12P53778 367 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 SLC14A1Q13336 389 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 GRAMD1BQ3KR37 738 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 HMBOX1Q6NT76 420 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 TRIM48Q8IWZ4 208 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 RBM12BQ8IXT5 1001 aaKnown RBP12.31□□□□□ -0.44
SNX1-211ENST00000560829 ANKFN1Q8N957 763 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 TM4SF18Q96CE8 201 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 BTBD9Q96Q07 612 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 OR2A14Q96R47 310 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 AGPAT4Q9NRZ5 378 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 ANKMY1Q9P2S6 941 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 CORO2BQ9UQ03 480 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 AURKCQ9UQB9 309 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 ENTPD2Q9Y5L3 495 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 A0A0A6YYD5 115 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 OR2A25A4D2G3 310 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 CXCR6O00574 342 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 TIPRLO75663 272 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 WNT1P04628 370 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 RETP07949 1114 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 CELA2BP08218 269 aaPredicted RBP12.31□□□□□ -0.44
SNX1-211ENST00000560829 CTSEP14091 401 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 ENGP17813 658 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 DDX5P17844 614 aaKnown RBP12.31□□□□□ -0.44
SNX1-211ENST00000560829 CD38P28907 300 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 TSFMP43897 325 aaKnown RBP12.31□□□□□ -0.44
SNX1-211ENST00000560829 PXNP49023 591 aaPredicted RBP12.31□□□□□ -0.44
SNX1-211ENST00000560829 RACK1P63244 317 aaKnown RBP12.31□□□□□ -0.44
SNX1-211ENST00000560829 HEPACAMQ14CZ8 416 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 PLCL1Q15111 1095 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 CPZQ66K79 652 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 OR4C11Q6IEV9 310 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 TAF8Q7Z7C8 310 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 NAGSQ8N159 534 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 FAM110BQ8TC76 370 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 ZFP90Q8TF47 636 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 MS4A6EQ96DS6 147 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 TBCDQ9BTW9 1192 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 SPATA9Q9BWV2 254 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 CAAP1Q9H8G2 361 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 TPT1P8Q9HAU6 139 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 SPASTQ9UBP0 616 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 APOBEC3BQ9UH17 382 aaKnown RBP12.31□□□□□ -0.44
SNX1-211ENST00000560829 VPS4AQ9UN37 437 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 PCM1Q15154 2024 aa12.31□□□□□ -0.44
SNX1-211ENST00000560829 H0YJX3 145 aa12.3□□□□□ -0.44
SNX1-211ENST00000560829 GSTA4O15217 222 aa12.3□□□□□ -0.44
SNX1-211ENST00000560829 TMPRSS11DO60235 418 aa12.3□□□□□ -0.44
SNX1-211ENST00000560829 CSF2P04141 144 aa12.3□□□□□ -0.44
SNX1-211ENST00000560829 RPSAP08865 295 aaKnown RBP12.3□□□□□ -0.44
SNX1-211ENST00000560829 HOXB3P14651 431 aaPredicted RBP12.3□□□□□ -0.44
SNX1-211ENST00000560829 NME1P15531 152 aaKnown RBP12.3□□□□□ -0.44
SNX1-211ENST00000560829 UGT2B7P16662 529 aa12.3□□□□□ -0.44
SNX1-211ENST00000560829 ZNF26P17031 533 aaPredicted RBP12.3□□□□□ -0.44
SNX1-211ENST00000560829 IL1RNP18510 177 aa12.3□□□□□ -0.44
SNX1-211ENST00000560829 FASP25445 335 aa12.3□□□□□ -0.44
SNX1-211ENST00000560829 SOX11P35716 441 aa12.3□□□□□ -0.44
SNX1-211ENST00000560829 AQP4P55087 323 aa12.3□□□□□ -0.44
SNX1-211ENST00000560829 RPS15AP62244 130 aaKnown RBP12.3□□□□□ -0.44
SNX1-211ENST00000560829 RELAQ04206 551 aa12.3□□□□□ -0.44
SNX1-211ENST00000560829 GAB1Q13480 694 aa12.3□□□□□ -0.44
SNX1-211ENST00000560829 ZNF542PQ5EBM4 170 aa12.3□□□□□ -0.44
SNX1-211ENST00000560829 PRPF38BQ5VTL8 546 aaKnown RBP12.3□□□□□ -0.44
SNX1-211ENST00000560829 ERICH5Q6P6B1 374 aa12.3□□□□□ -0.44
SNX1-211ENST00000560829 FAM47BQ8NA70 645 aa12.3□□□□□ -0.44
SNX1-211ENST00000560829 OR4A15Q8NGL6 344 aa12.3□□□□□ -0.44
SNX1-211ENST00000560829 SLC37A2Q8TED4 501 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms