RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 LRRN1Q6UXK5 716 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 UNQ6494/PRO21346Q6UXR6 183 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 SLC39A5Q6ZMH5 540 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 SLC46A3Q7Z3Q1 461 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 TFAP2DQ7Z6R9 452 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 PHYKPLQ8IUZ5 450 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 SERPINA12Q8IW75 414 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 UBQLNLQ8IYU4 475 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 GPC2Q8N158 579 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 CYP4Z2PQ8N1L4 340 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 TP53I13Q8NBR0 393 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 SLC37A3Q8NCC5 494 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 OR7D4Q8NG98 312 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 OR5T3Q8NGG3 340 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 OR52B4Q8NGK2 314 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 OR5D18Q8NGL1 313 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 OR56A3Q8NH54 315 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 TRMT10AQ8TBZ6 339 aaKnown RBP4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 MRGPRDQ8TDS7 321 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 ARNTL2Q8WYA1 636 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 AKAP1Q92667 903 aaKnown RBP eCLIP4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 P2RX5Q93086 422 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 EME1Q96AY2 570 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 AP2M1Q96CW1 435 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 LINGO1Q96FE5 620 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 DTD2Q96FN9 168 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 LCORQ96JN0 433 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 SLITRK1Q96PX8 696 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 SNX18Q96RF0 628 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 TGS1Q96RS0 853 aaKnown RBP4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 HAPLN3Q96S86 360 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 NPAS1Q99742 590 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 SPAG8Q99932 426 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 C7orf50Q9BRJ6 194 aaKnown RBP4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 C1QTNF1Q9BXJ1 281 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 FSD1LQ9BXM9 530 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 CCDC90BQ9GZT6 254 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 HOXD1Q9GZZ0 328 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 S1PR5Q9H228 398 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 NELFAQ9H3P2 528 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 PDZD7Q9H5P4 517 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 GREM2Q9H772 168 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 GLOD4Q9HC38 313 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 ZNF160Q9HCG1 818 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 SEMA4BQ9NPR2 832 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 XPNPEP1Q9NQW7 623 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 NANSQ9NR45 359 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 TLR9Q9NR96 1032 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 CHST7Q9NS84 486 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 MS4A12Q9NXJ0 267 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 DPP3Q9NY33 737 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 SLC2A8Q9NY64 477 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 SLCO1C1Q9NYB5 712 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 PRR13Q9NZ81 148 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 SEC14L3Q9UDX4 400 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 DNAJC12Q9UKB3 198 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 UTS2RQ9UKP6 389 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 PADI1Q9ULC6 663 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 TBC1D24Q9ULP9 559 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 SLC22A13Q9Y226 551 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 CDYLQ9Y232 598 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 OSGIN2Q9Y236 505 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 MRPS33Q9Y291 106 aaKnown RBP4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 INSL6Q9Y581 213 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 NPTNQ9Y639 398 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 A0A1B0GTI1 187 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 PQLC2LA1A4F0 135 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 MARCH11A6NNE9 402 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 A8MX80 341 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 ATP6V1G2-DDX39BF2Z307 99 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 QSOX1O00391 747 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 CCSO14618 274 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 FFAR3O14843 346 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 CLIC2O15247 247 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 PAPSS1O43252 624 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 AKAP8O43823 692 aaKnown RBP4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 SLC28A2O43868 658 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 FCMRO60667 390 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 DPM1O60762 260 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 TAF5LO75529 589 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 ABHD16AO95870 558 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 IFNA2P01563 188 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 SERPINB2P05120 415 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 CHRM5P08912 532 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 TFPTP0C1Z6 253 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 CBSLP0DN79 551 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 CTSAP10619 480 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 PNMTP11086 282 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 CYP4B1P13584 511 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 ZNF44P15621 663 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 PPP3CBP16298 524 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 ZNF8P17098 575 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 XRCC1P18887 633 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 ITGALP20701 1170 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 MALP21145 153 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 ACHEP22303 614 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 IL1R2P27930 398 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 STX2P32856 288 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 CBSP35520 551 aa4.31□□□□□ -1.72
HMGB3P26-201ENST00000560051 PBX3P40426 434 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms