RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 ICAM2P13598 275 aa8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 EPORP19235 508 aa8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 TFEBP19484 476 aa8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 IL10P22301 178 aa8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 CRABP2P29373 138 aa8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 HNF4AP41235 474 aa8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 HSPA7P48741 367 aa8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 RAB8AP61006 207 aa8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 OLR1P78380 273 aa8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 SLBPQ14493 270 aaKnown RBP eCLIP8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 SLMAPQ14BN4 828 aa8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 MFSD4BQ5TF39 518 aa8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 MROH9Q5TGP6 573 aa8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 B3GNTL1Q67FW5 361 aaPredicted RBP8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 TMIGD1Q6UXZ0 262 aa8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 ABHD13Q7L211 337 aa8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 ANKRD37Q7Z713 158 aa8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 CENPLQ8N0S6 344 aaPredicted RBP8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 SIRT6Q8N6T7 355 aa8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 CATSPER1Q8NEC5 780 aa8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 DNAJB14Q8TBM8 379 aa8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 TSLPQ969D9 159 aa8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 TBC1D20Q96BZ9 403 aa8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 WDR34Q96EX3 536 aa8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 ATOH8Q96SQ7 321 aa8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 CAPS2Q9BXY5 557 aa8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 FUT8Q9BYC5 575 aa8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 RBCK1Q9BYM8 510 aa8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 EPS8L2Q9H6S3 715 aa8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 ALG9Q9H6U8 611 aa8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 NT5DC2Q9H857 520 aa8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 CNOT10Q9H9A5 744 aaKnown RBP8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 CLK4Q9HAZ1 481 aaKnown RBP8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 NMRAL1Q9HBL8 299 aa8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 ASF1BQ9NVP2 202 aa8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 WWOXQ9NZC7 414 aa8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 GPRC5BQ9NZH0 403 aa8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 CD274Q9NZQ7 290 aa8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 PTGFRNQ9P2B2 879 aa8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 ZNF490Q9ULM2 529 aaPredicted RBP8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 RNF112Q9ULX5 631 aa8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 VPS4AQ9UN37 437 aa8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 ASB1Q9Y576 335 aa8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 GTF3C1Q12789 2109 aa8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 DOPEY1Q5JWR5 2465 aa8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 MAST4O15021 2626 aa8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 LRIT2A6NDA9 550 aa8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 URADA6NGE7 173 aa8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 MAGEB17A8MXT2 336 aa8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 KERAO60938 352 aa8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 CDC123O75794 336 aaPredicted RBP8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 WFS1O76024 890 aa8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 TUBB4AP04350 444 aa8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 C2P06681 752 aa8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 FHP07954 510 aa8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 LTA4HP09960 611 aaKnown RBP8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 MTHFD2P13995 350 aa8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 CD22P20273 847 aa8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 ECHS1P30084 290 aa8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 HNRNPH1P31943 449 aaKnown RBP8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 TSFMP43897 325 aaKnown RBP8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 GLRBP48167 497 aa8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 AGTR2P50052 363 aa8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 SKP1P63208 163 aa8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 IRF9Q00978 393 aa8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 MRPL49Q13405 166 aaKnown RBP8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 BMPR2Q13873 1038 aa8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 DOC2AQ14183 400 aa8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 E2F2Q14209 437 aa8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 ZNF169Q14929 603 aaPredicted RBP8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 ABRAXAS2Q15018 415 aa8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 NSDHLQ15738 373 aa8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 SFT2D3Q587I9 215 aa8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 TOR1AIP1Q5JTV8 583 aa8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 PLAG1Q6DJT9 500 aa8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 NIPAL1Q6NVV3 410 aa8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 H3F3CQ6NXT2 135 aa8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 RAPH1Q70E73 1250 aa8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 VN1R5Q7Z5H4 357 aa8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 TBC1D1Q86TI0 1168 aaPredicted RBP8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 KRT78Q8N1N4 520 aa8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 FAM26EQ8N5C1 309 aa8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 SNX31Q8N9S9 440 aa8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 MNS1Q8NEH6 495 aa8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 TTLQ8NG68 377 aa8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 STAG3L4Q8TBR4 150 aa8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 KCTD4Q8WVF5 259 aa8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 IFT81Q8WYA0 676 aa8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 HAS2Q92819 552 aa8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 EXT2Q93063 718 aa8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 NXNL1Q96CM4 212 aa8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 MS4A6EQ96DS6 147 aa8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 MRRFQ96E11 262 aaKnown RBP8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 CD244Q9BZW8 370 aa8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 PITHD1Q9GZP4 211 aaPredicted RBP8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 CDC42EP4Q9H3Q1 356 aaKnown RBP8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 EHD1Q9H4M9 534 aa8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 ACSS3Q9H6R3 686 aa8.26□□□□□ -1.09
SNRPA1-206ENST00000558059 PLA2G3Q9NZ20 509 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms