RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 DDX39BQ13838 428 aaKnown RBP11.44□□□□□ -0.58
SRP54-206ENST00000555317 PCBP2Q15366 365 aaKnown RBP eCLIP11.44□□□□□ -0.58
SRP54-206ENST00000555317 VWA5B1Q5TIE3 1220 aa11.44□□□□□ -0.58
SRP54-206ENST00000555317 KIRREL2Q6UWL6 708 aa11.44□□□□□ -0.58
SRP54-206ENST00000555317 GOLGA7Q7Z5G4 137 aa11.44□□□□□ -0.58
SRP54-206ENST00000555317 LAPTM4BQ86VI4 370 aa11.44□□□□□ -0.58
SRP54-206ENST00000555317 TEX19Q8NA77 164 aa11.44□□□□□ -0.58
SRP54-206ENST00000555317 FDCSPQ8NFU4 85 aa11.44□□□□□ -0.58
SRP54-206ENST00000555317 OR11G2Q8NGC1 345 aa11.44□□□□□ -0.58
SRP54-206ENST00000555317 CREB3L4Q8TEY5 395 aa11.44□□□□□ -0.58
SRP54-206ENST00000555317 TM9SF4Q92544 642 aa11.44□□□□□ -0.58
SRP54-206ENST00000555317 C8orf44Q96CB5 159 aa11.44□□□□□ -0.58
SRP54-206ENST00000555317 PEX11GQ96HA9 241 aa11.44□□□□□ -0.58
SRP54-206ENST00000555317 RBCK1Q9BYM8 510 aa11.44□□□□□ -0.58
SRP54-206ENST00000555317 VN1R1Q9GZP7 353 aa11.44□□□□□ -0.58
SRP54-206ENST00000555317 REXO4Q9GZR2 422 aaKnown RBP11.44□□□□□ -0.58
SRP54-206ENST00000555317 RHBGQ9H310 441 aa11.44□□□□□ -0.58
SRP54-206ENST00000555317 EPB41L4BQ9H329 900 aa11.44□□□□□ -0.58
SRP54-206ENST00000555317 IPPKQ9H8X2 491 aa11.44□□□□□ -0.58
SRP54-206ENST00000555317 CLK4Q9HAZ1 481 aaKnown RBP11.44□□□□□ -0.58
SRP54-206ENST00000555317 COPG2Q9UBF2 871 aa11.44□□□□□ -0.58
SRP54-206ENST00000555317 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.44□□□□□ -0.58
SRP54-206ENST00000555317 PCDHGB7Q9Y5F8 929 aa11.44□□□□□ -0.58
SRP54-206ENST00000555317 V9GYY5 206 aaPredicted RBP11.44□□□□□ -0.58
SRP54-206ENST00000555317 TNRC6AQ8NDV7 1962 aaKnown RBP11.44□□□□□ -0.58
SRP54-206ENST00000555317 LRIT2A6NDA9 550 aa11.43□□□□□ -0.58
SRP54-206ENST00000555317 STX16-NPEPL1H3BU86 382 aa11.43□□□□□ -0.58
SRP54-206ENST00000555317 GOLGA8RI6L899 631 aa11.43□□□□□ -0.58
SRP54-206ENST00000555317 STX16O14662 325 aa11.43□□□□□ -0.58
SRP54-206ENST00000555317 CHST10O43529 356 aa11.43□□□□□ -0.58
SRP54-206ENST00000555317 B3GALT2O43825 422 aa11.43□□□□□ -0.58
SRP54-206ENST00000555317 SLC28A2O43868 658 aa11.43□□□□□ -0.58
SRP54-206ENST00000555317 UGDHO60701 494 aa11.43□□□□□ -0.58
SRP54-206ENST00000555317 DPM1O60762 260 aa11.43□□□□□ -0.58
SRP54-206ENST00000555317 JRKO75564 520 aa11.43□□□□□ -0.58
SRP54-206ENST00000555317 CDC123O75794 336 aaPredicted RBP11.43□□□□□ -0.58
SRP54-206ENST00000555317 CEACAM4O75871 244 aa11.43□□□□□ -0.58
SRP54-206ENST00000555317 SIX3O95343 332 aaPredicted RBP11.43□□□□□ -0.58
SRP54-206ENST00000555317 FHP07954 510 aa11.43□□□□□ -0.58
SRP54-206ENST00000555317 GSTA1P08263 222 aa11.43□□□□□ -0.58
SRP54-206ENST00000555317 PYGBP11216 843 aa11.43□□□□□ -0.58
SRP54-206ENST00000555317 NR1D1P20393 614 aa11.43□□□□□ -0.58
SRP54-206ENST00000555317 HSD17B3P37058 310 aa11.43□□□□□ -0.58
SRP54-206ENST00000555317 PLA2G16P53816 162 aa11.43□□□□□ -0.58
SRP54-206ENST00000555317 OLR1P78380 273 aa11.43□□□□□ -0.58
SRP54-206ENST00000555317 BTN3A2P78410 334 aa11.43□□□□□ -0.58
SRP54-206ENST00000555317 KLRB1Q12918 225 aa11.43□□□□□ -0.58
SRP54-206ENST00000555317 RCN2Q14257 317 aa11.43□□□□□ -0.58
SRP54-206ENST00000555317 MYBPC3Q14896 1274 aa11.43□□□□□ -0.58
SRP54-206ENST00000555317 LIPJQ5W064 366 aa11.43□□□□□ -0.58
SRP54-206ENST00000555317 GRHL2Q6ISB3 625 aa11.43□□□□□ -0.58
SRP54-206ENST00000555317 EMBQ6PCB8 327 aa11.43□□□□□ -0.58
SRP54-206ENST00000555317 NDUFAF7Q7L592 441 aa11.43□□□□□ -0.58
SRP54-206ENST00000555317 HPS6Q86YV9 775 aa11.43□□□□□ -0.58
SRP54-206ENST00000555317 TMEM151BQ8IW70 566 aa11.43□□□□□ -0.58
SRP54-206ENST00000555317 SRFBP1Q8NEF9 429 aaKnown RBP11.43□□□□□ -0.58
SRP54-206ENST00000555317 ARMC2Q8NEN0 867 aa11.43□□□□□ -0.58
SRP54-206ENST00000555317 OR2L5Q8NG80 312 aa11.43□□□□□ -0.58
SRP54-206ENST00000555317 OR5T3Q8NGG3 340 aa11.43□□□□□ -0.58
SRP54-206ENST00000555317 PPP4R1Q8TF05 950 aa11.43□□□□□ -0.58
SRP54-206ENST00000555317 TBC1D20Q96BZ9 403 aa11.43□□□□□ -0.58
SRP54-206ENST00000555317 ROGDIQ9GZN7 287 aa11.43□□□□□ -0.58
SRP54-206ENST00000555317 KLHL31Q9H511 634 aa11.43□□□□□ -0.58
SRP54-206ENST00000555317 ZNF160Q9HCG1 818 aa11.43□□□□□ -0.58
SRP54-206ENST00000555317 RIC8BQ9NVN3 520 aa11.43□□□□□ -0.58
SRP54-206ENST00000555317 ADGRE2Q9UHX3 823 aa11.43□□□□□ -0.58
SRP54-206ENST00000555317 ANAPC2Q9UJX6 822 aa11.43□□□□□ -0.58
SRP54-206ENST00000555317 PCDHGA11Q9Y5H2 935 aa11.43□□□□□ -0.58
SRP54-206ENST00000555317 BSNQ9UPA5 3926 aa11.43□□□□□ -0.58
SRP54-206ENST00000555317 A0A0G2JN53 185 aa11.42□□□□□ -0.58
SRP54-206ENST00000555317 LRRC14BA6NHZ5 514 aa11.42□□□□□ -0.58
SRP54-206ENST00000555317 B4GALT2O60909 372 aa11.42□□□□□ -0.58
SRP54-206ENST00000555317 CDH16O75309 829 aa11.42□□□□□ -0.58
SRP54-206ENST00000555317 WFS1O76024 890 aa11.42□□□□□ -0.58
SRP54-206ENST00000555317 CLDN9O95484 217 aa11.42□□□□□ -0.58
SRP54-206ENST00000555317 B3GALT4O96024 378 aa11.42□□□□□ -0.58
SRP54-206ENST00000555317 SHBGP04278 402 aa11.42□□□□□ -0.58
SRP54-206ENST00000555317 EPORP19235 508 aa11.42□□□□□ -0.58
SRP54-206ENST00000555317 CD22P20273 847 aa11.42□□□□□ -0.58
SRP54-206ENST00000555317 HNRNPH1P31943 449 aaKnown RBP11.42□□□□□ -0.58
SRP54-206ENST00000555317 RAP1GDS1P52306 607 aa11.42□□□□□ -0.58
SRP54-206ENST00000555317 SNRPNP63162 240 aaKnown RBP11.42□□□□□ -0.58
SRP54-206ENST00000555317 HYAL2Q12891 473 aa11.42□□□□□ -0.58
SRP54-206ENST00000555317 ABRAXAS2Q15018 415 aa11.42□□□□□ -0.58
SRP54-206ENST00000555317 NSDHLQ15738 373 aa11.42□□□□□ -0.58
SRP54-206ENST00000555317 TMEM35AQ53FP2 167 aa11.42□□□□□ -0.58
SRP54-206ENST00000555317 AGAP7PQ5VUJ5 663 aa11.42□□□□□ -0.58
SRP54-206ENST00000555317 TTC19Q6DKK2 380 aaPredicted RBP11.42□□□□□ -0.58
SRP54-206ENST00000555317 WDR93Q6P2C0 686 aa11.42□□□□□ -0.58
SRP54-206ENST00000555317 ATG14Q6ZNE5 492 aa11.42□□□□□ -0.58
SRP54-206ENST00000555317 CHSY3Q70JA7 882 aa11.42□□□□□ -0.58
SRP54-206ENST00000555317 PARP9Q8IXQ6 854 aa11.42□□□□□ -0.58
SRP54-206ENST00000555317 KBTBD2Q8IY47 623 aa11.42□□□□□ -0.58
SRP54-206ENST00000555317 ADAMTS18Q8TE60 1221 aa11.42□□□□□ -0.58
SRP54-206ENST00000555317 EPS8L3Q8TE67 593 aaKnown RBP11.42□□□□□ -0.58
SRP54-206ENST00000555317 MS4A6EQ96DS6 147 aa11.42□□□□□ -0.58
SRP54-206ENST00000555317 CMTM7Q96FZ5 175 aa11.42□□□□□ -0.58
SRP54-206ENST00000555317 THOC3Q96J01 351 aaKnown RBP11.42□□□□□ -0.58
SRP54-206ENST00000555317 AGAP4Q96P64 663 aa11.42□□□□□ -0.58
SRP54-206ENST00000555317 KCNC2Q96PR1 638 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms