RNA–Protein interactions for RNA: ENST00000554947.5

SDR39U1-209, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,203 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-209ENST00000554947 APLFQ8IW19 511 aaPredicted RBP22.93■■□□□ 1.26
SDR39U1-209ENST00000554947 MYRIPQ8NFW9 859 aa22.93■■□□□ 1.26
SDR39U1-209ENST00000554947 OR51Q1Q8NH59 317 aa22.93■■□□□ 1.26
SDR39U1-209ENST00000554947 APOBEC4Q8WW27 367 aaKnown RBP22.93■■□□□ 1.26
SDR39U1-209ENST00000554947 CMTM7Q96FZ5 175 aa22.93■■□□□ 1.26
SDR39U1-209ENST00000554947 VPS50Q96JG6 964 aa22.93■■□□□ 1.26
SDR39U1-209ENST00000554947 OR1F2PQ96R84 312 aa22.93■■□□□ 1.26
SDR39U1-209ENST00000554947 MS4A8Q9BY19 250 aa22.93■■□□□ 1.26
SDR39U1-209ENST00000554947 SOX17Q9H6I2 414 aaPredicted RBP22.93■■□□□ 1.26
SDR39U1-209ENST00000554947 SEMA4BQ9NPR2 832 aaPredicted RBP22.93■■□□□ 1.26
SDR39U1-209ENST00000554947 MAN2B2Q9Y2E5 1009 aa22.93■■□□□ 1.26
SDR39U1-209ENST00000554947 RNF11Q9Y3C5 154 aa22.93■■□□□ 1.26
SDR39U1-209ENST00000554947 RDH16O75452 317 aa22.92■■□□□ 1.26
SDR39U1-209ENST00000554947 SUPT7LO94864 414 aa22.92■■□□□ 1.26
SDR39U1-209ENST00000554947 BMP10O95393 424 aa22.92■■□□□ 1.26
SDR39U1-209ENST00000554947 MLYCDO95822 493 aa22.92■■□□□ 1.26
SDR39U1-209ENST00000554947 ATXN8OSP0DMR3 200 aa22.92■■□□□ 1.26
SDR39U1-209ENST00000554947 PCNAP12004 261 aa22.92■■□□□ 1.26
SDR39U1-209ENST00000554947 CCR10P46092 362 aa22.92■■□□□ 1.26
SDR39U1-209ENST00000554947 ARFIP1P53367 373 aa22.92■■□□□ 1.26
SDR39U1-209ENST00000554947 VWA2Q5GFL6 755 aa22.92■■□□□ 1.26
SDR39U1-209ENST00000554947 CEP85LQ5SZL2 805 aa22.92■■□□□ 1.26
SDR39U1-209ENST00000554947 ADNP2Q6IQ32 1131 aa22.92■■□□□ 1.26
SDR39U1-209ENST00000554947 TRIM40Q6P9F5 258 aa22.92■■□□□ 1.26
SDR39U1-209ENST00000554947 CHSY3Q70JA7 882 aa22.92■■□□□ 1.26
SDR39U1-209ENST00000554947 MILR1Q7Z6M3 343 aa22.92■■□□□ 1.26
SDR39U1-209ENST00000554947 ZC3H7AQ8IWR0 971 aaKnown RBP22.92■■□□□ 1.26
SDR39U1-209ENST00000554947 HUS1BQ8NHY5 278 aa22.92■■□□□ 1.26
SDR39U1-209ENST00000554947 WDR20Q8TBZ3 569 aa22.92■■□□□ 1.26
SDR39U1-209ENST00000554947 EXTL1Q92935 676 aa22.92■■□□□ 1.26
SDR39U1-209ENST00000554947 FAR2Q96K12 515 aa22.92■■□□□ 1.26
SDR39U1-209ENST00000554947 YIPF2Q9BWQ6 316 aa22.92■■□□□ 1.26
SDR39U1-209ENST00000554947 NPLQ9BXD5 320 aaPredicted RBP22.92■■□□□ 1.26
SDR39U1-209ENST00000554947 KCNMB2Q9Y691 235 aa22.92■■□□□ 1.26
SDR39U1-209ENST00000554947 SCN2AQ99250 2005 aa22.92■■□□□ 1.26
SDR39U1-209ENST00000554947 FOXE1O00358 373 aaPredicted RBP22.91■■□□□ 1.26
SDR39U1-209ENST00000554947 ERI3O43414 337 aaKnown RBP22.91■■□□□ 1.26
SDR39U1-209ENST00000554947 CPA3P15088 417 aa22.91■■□□□ 1.26
SDR39U1-209ENST00000554947 OTX2P32243 289 aa22.91■■□□□ 1.26
SDR39U1-209ENST00000554947 ARL1P40616 181 aaPredicted RBP22.91■■□□□ 1.26
SDR39U1-209ENST00000554947 CDH13P55290 713 aa22.91■■□□□ 1.26
SDR39U1-209ENST00000554947 RAB8AP61006 207 aa22.91■■□□□ 1.26
SDR39U1-209ENST00000554947 MAT1AQ00266 395 aaKnown RBP22.91■■□□□ 1.26
SDR39U1-209ENST00000554947 RBBP7Q16576 425 aa22.91■■□□□ 1.26
SDR39U1-209ENST00000554947 CPSF6Q16630 551 aaKnown RBP eCLIP22.91■■□□□ 1.26
SDR39U1-209ENST00000554947 SYT16Q17RD7 645 aa22.91■■□□□ 1.26
SDR39U1-209ENST00000554947 TNFAIP8L3Q5GJ75 292 aa22.91■■□□□ 1.26
SDR39U1-209ENST00000554947 ABHD17CQ6PCB6 329 aa22.91■■□□□ 1.26
SDR39U1-209ENST00000554947 MED25Q71SY5 747 aa22.91■■□□□ 1.26
SDR39U1-209ENST00000554947 MRGPREQ86SM8 312 aa22.91■■□□□ 1.26
SDR39U1-209ENST00000554947 TMEM102Q8N9M5 508 aaPredicted RBP22.91■■□□□ 1.26
SDR39U1-209ENST00000554947 CCDC63Q8NA47 563 aa22.91■■□□□ 1.26
SDR39U1-209ENST00000554947 PGM2Q96G03 612 aa22.91■■□□□ 1.26
SDR39U1-209ENST00000554947 ZNF382Q96SR6 550 aa22.91■■□□□ 1.26
SDR39U1-209ENST00000554947 CRB3Q9BUF7 120 aa22.91■■□□□ 1.26
SDR39U1-209ENST00000554947 ROGDIQ9GZN7 287 aa22.91■■□□□ 1.26
SDR39U1-209ENST00000554947 SSU72Q9NP77 194 aaKnown RBP22.91■■□□□ 1.26
SDR39U1-209ENST00000554947 OXSMQ9NWU1 459 aa22.91■■□□□ 1.26
SDR39U1-209ENST00000554947 TRPS1Q9UHF7 1281 aa22.91■■□□□ 1.26
SDR39U1-209ENST00000554947 C4orf51C9J302 202 aa22.9■■□□□ 1.26
SDR39U1-209ENST00000554947 XCR1P46094 333 aa22.9■■□□□ 1.26
SDR39U1-209ENST00000554947 RRADP55042 308 aa22.9■■□□□ 1.26
SDR39U1-209ENST00000554947 ZRSR2Q15696 482 aaKnown RBP22.9■■□□□ 1.26
SDR39U1-209ENST00000554947 LINC00303Q3SY05 128 aa22.9■■□□□ 1.26
SDR39U1-209ENST00000554947 DEPDC1Q5TB30 811 aa22.9■■□□□ 1.26
SDR39U1-209ENST00000554947 PPP1R32Q7Z5V6 425 aa22.9■■□□□ 1.26
SDR39U1-209ENST00000554947 OR4F6Q8NGB9 312 aa22.9■■□□□ 1.26
SDR39U1-209ENST00000554947 QRFPRQ96P65 431 aa22.9■■□□□ 1.26
SDR39U1-209ENST00000554947 KCNC2Q96PR1 638 aa22.9■■□□□ 1.26
SDR39U1-209ENST00000554947 CDK15Q96Q40 435 aa22.9■■□□□ 1.26
SDR39U1-209ENST00000554947 CENPKQ9BS16 269 aa22.9■■□□□ 1.26
SDR39U1-209ENST00000554947 TBCDQ9BTW9 1192 aa22.9■■□□□ 1.26
SDR39U1-209ENST00000554947 DMRT3Q9NQL9 472 aa22.9■■□□□ 1.26
SDR39U1-209ENST00000554947 HCN3Q9P1Z3 774 aa22.9■■□□□ 1.26
SDR39U1-209ENST00000554947 C3orf18Q9UK00 162 aa22.9■■□□□ 1.26
SDR39U1-209ENST00000554947 ACTL7BQ9Y614 415 aa22.9■■□□□ 1.26
SDR39U1-209ENST00000554947 ATMQ13315 3056 aa22.89■■□□□ 1.26
SDR39U1-209ENST00000554947 IDSB3KWA1 339 aa22.89■■□□□ 1.25
SDR39U1-209ENST00000554947 H3BQF6 201 aa22.89■■□□□ 1.25
SDR39U1-209ENST00000554947 PEX12O00623 359 aa22.89■■□□□ 1.25
SDR39U1-209ENST00000554947 ATXN7O15265 892 aaPredicted RBP22.89■■□□□ 1.25
SDR39U1-209ENST00000554947 PTX3P26022 381 aaPredicted RBP22.89■■□□□ 1.25
SDR39U1-209ENST00000554947 TSFMP43897 325 aaKnown RBP22.89■■□□□ 1.25
SDR39U1-209ENST00000554947 EMP2P54851 167 aa22.89■■□□□ 1.25
SDR39U1-209ENST00000554947 PKNOX1P55347 436 aa22.89■■□□□ 1.25
SDR39U1-209ENST00000554947 LCP2Q13094 533 aa22.89■■□□□ 1.25
SDR39U1-209ENST00000554947 KHDRBS2Q5VWX1 349 aaKnown RBP22.89■■□□□ 1.25
SDR39U1-209ENST00000554947 LIPMQ5VYY2 423 aa22.89■■□□□ 1.25
SDR39U1-209ENST00000554947 FRG2Q64ET8 278 aa22.89■■□□□ 1.25
SDR39U1-209ENST00000554947 RPS27LQ71UM5 84 aaKnown RBP22.89■■□□□ 1.25
SDR39U1-209ENST00000554947 TRPC4APQ8TEL6 797 aa22.89■■□□□ 1.25
SDR39U1-209ENST00000554947 FER1L6-AS2Q96M78 137 aa22.89■■□□□ 1.25
SDR39U1-209ENST00000554947 FRG2BQ96QU4 278 aa22.89■■□□□ 1.25
SDR39U1-209ENST00000554947 F2RL3Q96RI0 385 aa22.89■■□□□ 1.25
SDR39U1-209ENST00000554947 SERINC2Q96SA4 455 aa22.89■■□□□ 1.25
SDR39U1-209ENST00000554947 ADNPQ9H2P0 1102 aa22.89■■□□□ 1.25
SDR39U1-209ENST00000554947 TUBD1Q9UJT1 453 aa22.89■■□□□ 1.25
SDR39U1-209ENST00000554947 ZFYVE26Q68DK2 2539 aa22.88■■□□□ 1.25
SDR39U1-209ENST00000554947 A0A1W2PQ72 361 aa22.88■■□□□ 1.25
SDR39U1-209ENST00000554947 ZNF860A6NHJ4 632 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms