RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 SLC2A4RGQ9NR83 387 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 RGPD2P0DJD1 1756 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 EIF1AYO14602 144 aaKnown RBP12.35□□□□□ -0.43
CHD4-211ENST00000544484 TRAPPC6AO75865 159 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 IFI30P13284 250 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 CYBAP13498 195 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 RPS3AP61247 264 aaKnown RBP12.35□□□□□ -0.43
CHD4-211ENST00000544484 NANOGNBQ7Z5D8 188 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 THEM6Q8WUY1 208 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 KCTD7Q96MP8 289 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 CD180Q99467 661 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 DCSTAMPQ9H295 470 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 EURLQ9NYK6 297 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 OARD1Q9Y530 152 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 FEZF1A0PJY2 475 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 OAZ2O95190 189 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 PSKH1P11801 424 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 GDI2P50395 445 aaKnown RBP12.35□□□□□ -0.43
CHD4-211ENST00000544484 PLGLB1Q02325 96 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 SIX1Q15475 284 aaPredicted RBP12.35□□□□□ -0.43
CHD4-211ENST00000544484 C18orf21Q32NC0 220 aaPredicted RBP12.35□□□□□ -0.43
CHD4-211ENST00000544484 REEP3Q6NUK4 255 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 KLHDC10Q6PID8 442 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 CMTR2Q8IYT2 770 aaKnown RBP12.35□□□□□ -0.43
CHD4-211ENST00000544484 NAXEQ8NCW5 288 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 TM9SF2Q99805 663 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 BOCQ9BWV1 1114 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 MTG2Q9H4K7 406 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 SOX17Q9H6I2 414 aaPredicted RBP12.35□□□□□ -0.43
CHD4-211ENST00000544484 SERPINA3P01011 423 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 ZNF20P17024 532 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 CDH11P55287 796 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 TBPL1P62380 186 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 SCAPQ12770 1279 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 TYSND1Q2T9J0 566 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 ZNF613Q6PF04 617 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 C17orf99Q6UX52 265 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 TCEANCQ8N8B7 351 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 GPR174Q9BXC1 333 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 SERTAD3Q9UJW9 196 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 STOML2Q9UJZ1 356 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 OR6C74A6NCV1 312 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 RTCAO00442 366 aaKnown RBP12.35□□□□□ -0.43
CHD4-211ENST00000544484 LATO43561 262 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 OR12D1P0DN82 309 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 MTTPP55157 894 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 OR4D1Q15615 310 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 DEFB134Q4QY38 66 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 CLLU1OSQ5K130 101 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 ARMC10Q8N2F6 343 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 YIPF7Q8N8F6 280 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 PIK3R3Q92569 461 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 TTYH2Q9BSA4 534 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 METTL7AQ9H8H3 244 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 SDHAF3Q9NRP4 125 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 MID1O15344 667 aa12.34□□□□□ -0.43
CHD4-211ENST00000544484 RNGTTO60942 597 aaKnown RBP12.34□□□□□ -0.43
CHD4-211ENST00000544484 SHMT2P34897 504 aa12.34□□□□□ -0.43
CHD4-211ENST00000544484 KCNC3Q14003 757 aa12.34□□□□□ -0.43
CHD4-211ENST00000544484 HCAR2Q8TDS4 363 aa12.34□□□□□ -0.43
CHD4-211ENST00000544484 F2RL3Q96RI0 385 aa12.34□□□□□ -0.43
CHD4-211ENST00000544484 LIN28AQ9H9Z2 209 aaKnown RBP12.34□□□□□ -0.43
CHD4-211ENST00000544484 IL23AQ9NPF7 189 aa12.34□□□□□ -0.43
CHD4-211ENST00000544484 VILLO15195 856 aa12.34□□□□□ -0.43
CHD4-211ENST00000544484 GSRP00390 522 aa12.34□□□□□ -0.43
CHD4-211ENST00000544484 C8BP07358 591 aa12.34□□□□□ -0.43
CHD4-211ENST00000544484 BCKDHAP12694 445 aa12.34□□□□□ -0.43
CHD4-211ENST00000544484 ARHGDIBP52566 201 aa12.34□□□□□ -0.43
CHD4-211ENST00000544484 RASGEF1BQ0VAM2 473 aa12.34□□□□□ -0.43
CHD4-211ENST00000544484 ELAVL3Q14576 367 aaKnown RBP12.34□□□□□ -0.43
CHD4-211ENST00000544484 OR4K14Q8NGD5 310 aa12.34□□□□□ -0.43
CHD4-211ENST00000544484 C1orf216Q8TAB5 229 aa12.34□□□□□ -0.43
CHD4-211ENST00000544484 MAPK15Q8TD08 544 aa12.34□□□□□ -0.43
CHD4-211ENST00000544484 CCDC106Q9BWC9 280 aa12.34□□□□□ -0.43
CHD4-211ENST00000544484 ZNF432O94892 652 aa12.34□□□□□ -0.43
CHD4-211ENST00000544484 LIPJQ5W064 366 aa12.34□□□□□ -0.43
CHD4-211ENST00000544484 SLC15A3Q8IY34 581 aa12.34□□□□□ -0.43
CHD4-211ENST00000544484 RHEBL1Q8TAI7 183 aa12.34□□□□□ -0.43
CHD4-211ENST00000544484 MCHR1Q99705 422 aa12.34□□□□□ -0.43
CHD4-211ENST00000544484 SPATA9Q9BWV2 254 aa12.34□□□□□ -0.43
CHD4-211ENST00000544484 STRA6Q9BX79 667 aa12.34□□□□□ -0.43
CHD4-211ENST00000544484 CFL2Q9Y281 166 aa12.34□□□□□ -0.43
CHD4-211ENST00000544484 VIRMAQ69YN4 1812 aaKnown RBP12.34□□□□□ -0.43
CHD4-211ENST00000544484 A0A1W2PRQ8 180 aa12.34□□□□□ -0.43
CHD4-211ENST00000544484 PDCD5O14737 125 aa12.34□□□□□ -0.43
CHD4-211ENST00000544484 TACSTD2P09758 323 aa12.34□□□□□ -0.43
CHD4-211ENST00000544484 RPP38P78345 283 aaKnown RBP12.34□□□□□ -0.43
CHD4-211ENST00000544484 TNFAIP8L3Q5GJ75 292 aa12.34□□□□□ -0.43
CHD4-211ENST00000544484 TMEM126BQ8IUX1 230 aa12.34□□□□□ -0.43
CHD4-211ENST00000544484 CHST14Q8NCH0 376 aa12.34□□□□□ -0.43
CHD4-211ENST00000544484 SMARCD2Q92925 531 aa12.34□□□□□ -0.43
CHD4-211ENST00000544484 SFXN1Q9H9B4 322 aa12.34□□□□□ -0.43
CHD4-211ENST00000544484 CD9P21926 228 aa12.34□□□□□ -0.43
CHD4-211ENST00000544484 NOVP48745 357 aa12.34□□□□□ -0.43
CHD4-211ENST00000544484 DOC2AQ14183 400 aa12.34□□□□□ -0.43
CHD4-211ENST00000544484 C9orf43Q8TAL5 461 aaPredicted RBP12.34□□□□□ -0.43
CHD4-211ENST00000544484 OR1A2Q9Y585 309 aa12.34□□□□□ -0.43
CHD4-211ENST00000544484 AKAP8O43823 692 aaKnown RBP12.34□□□□□ -0.43
CHD4-211ENST00000544484 C6P13671 934 aa12.34□□□□□ -0.43
CHD4-211ENST00000544484 BPIP17213 487 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms