RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 LIG4P49917 911 aa3.4□□□□□ -1.87
CCDC7-209ENST00000539197 IST1P53990 364 aa3.4□□□□□ -1.87
CCDC7-209ENST00000539197 MUC21Q5SSG8 566 aa3.4□□□□□ -1.87
CCDC7-209ENST00000539197 SYT2Q8N9I0 419 aaPredicted RBP3.4□□□□□ -1.87
CCDC7-209ENST00000539197 RUNDC3BQ96NL0 473 aa3.4□□□□□ -1.87
CCDC7-209ENST00000539197 MXD3Q9BW11 206 aa3.4□□□□□ -1.87
CCDC7-209ENST00000539197 UBA5Q9GZZ9 404 aa3.4□□□□□ -1.87
CCDC7-209ENST00000539197 KCNK13Q9HB14 408 aa3.4□□□□□ -1.87
CCDC7-209ENST00000539197 RPS6KA6Q9UK32 745 aa3.4□□□□□ -1.87
CCDC7-209ENST00000539197 COLEC10Q9Y6Z7 277 aa3.4□□□□□ -1.87
CCDC7-209ENST00000539197 WI2-2373I1.2A0A1W2PRP0 233 aa3.39□□□□□ -1.87
CCDC7-209ENST00000539197 SRPX2O60687 465 aaPredicted RBP3.39□□□□□ -1.87
CCDC7-209ENST00000539197 GFPT2O94808 682 aa3.39□□□□□ -1.87
CCDC7-209ENST00000539197 IGHG1P01857 330 aa3.39□□□□□ -1.87
CCDC7-209ENST00000539197 EEF1B2P24534 225 aaKnown RBP3.39□□□□□ -1.87
CCDC7-209ENST00000539197 NNMTP40261 264 aa3.39□□□□□ -1.87
CCDC7-209ENST00000539197 RIPK4P57078 832 aa3.39□□□□□ -1.87
CCDC7-209ENST00000539197 RBBP7Q16576 425 aa3.39□□□□□ -1.87
CCDC7-209ENST00000539197 LETM2Q2VYF4 491 aa3.39□□□□□ -1.87
CCDC7-209ENST00000539197 ANKRD33Q7Z3H0 272 aa3.39□□□□□ -1.87
CCDC7-209ENST00000539197 BANPQ8N9N5 519 aa3.39□□□□□ -1.87
CCDC7-209ENST00000539197 TC2NQ8N9U0 490 aa3.39□□□□□ -1.87
CCDC7-209ENST00000539197 OR1B1Q8NGR6 318 aa3.39□□□□□ -1.87
CCDC7-209ENST00000539197 GTSF1Q8WW33 167 aa3.39□□□□□ -1.87
CCDC7-209ENST00000539197 PPP1R16AQ96I34 528 aa3.39□□□□□ -1.87
CCDC7-209ENST00000539197 APOL6Q9BWW8 343 aa3.39□□□□□ -1.87
CCDC7-209ENST00000539197 C3orf14Q9HBI5 128 aa3.39□□□□□ -1.87
CCDC7-209ENST00000539197 ZNF275Q9NSD4 429 aaPredicted RBP3.39□□□□□ -1.87
CCDC7-209ENST00000539197 THYN1Q9P016 225 aa3.39□□□□□ -1.87
CCDC7-209ENST00000539197 TRAV9-2A0A087WT02 112 aa3.38□□□□□ -1.87
CCDC7-209ENST00000539197 TCP10L2B9ZVM9 353 aa3.38□□□□□ -1.87
CCDC7-209ENST00000539197 STARD3NLO95772 234 aa3.38□□□□□ -1.87
CCDC7-209ENST00000539197 MYL6BP14649 208 aa3.38□□□□□ -1.87
CCDC7-209ENST00000539197 FASP25445 335 aa3.38□□□□□ -1.87
CCDC7-209ENST00000539197 SPRP35270 261 aaPredicted RBP3.38□□□□□ -1.87
CCDC7-209ENST00000539197 RALGDSQ12967 914 aa3.38□□□□□ -1.87
CCDC7-209ENST00000539197 PTGISQ16647 500 aa3.38□□□□□ -1.87
CCDC7-209ENST00000539197 VWA2Q5GFL6 755 aa3.38□□□□□ -1.87
CCDC7-209ENST00000539197 ZNF530Q6P9A1 599 aaPredicted RBP3.38□□□□□ -1.87
CCDC7-209ENST00000539197 MACC1Q6ZN28 852 aa3.38□□□□□ -1.87
CCDC7-209ENST00000539197 CENPVQ7Z7K6 275 aaPredicted RBP3.38□□□□□ -1.87
CCDC7-209ENST00000539197 CCDC63Q8NA47 563 aa3.38□□□□□ -1.87
CCDC7-209ENST00000539197 PYCR2Q96C36 320 aa3.38□□□□□ -1.87
CCDC7-209ENST00000539197 EXOC1Q9NV70 894 aa3.38□□□□□ -1.87
CCDC7-209ENST00000539197 RSPH14Q9UHP6 348 aa3.38□□□□□ -1.87
CCDC7-209ENST00000539197 SLC12A6Q9UHW9 1150 aa3.38□□□□□ -1.87
CCDC7-209ENST00000539197 TRBV5-4A0A0C4DH59 114 aa3.37□□□□□ -1.87
CCDC7-209ENST00000539197 hCG_1809904A0A1W2PP81 198 aa3.37□□□□□ -1.87
CCDC7-209ENST00000539197 A0A1W2PPE2 198 aa3.37□□□□□ -1.87
CCDC7-209ENST00000539197 A0A1W2PR64 198 aa3.37□□□□□ -1.87
CCDC7-209ENST00000539197 PGM3O95394 542 aa3.37□□□□□ -1.87
CCDC7-209ENST00000539197 PIGRP01833 764 aa3.37□□□□□ -1.87
CCDC7-209ENST00000539197 ELK1P19419 428 aa3.37□□□□□ -1.87
CCDC7-209ENST00000539197 FEN1P39748 380 aaKnown RBP3.37□□□□□ -1.87
CCDC7-209ENST00000539197 UCNP55089 124 aa3.37□□□□□ -1.87
CCDC7-209ENST00000539197 CLDN17P56750 224 aa3.37□□□□□ -1.87
CCDC7-209ENST00000539197 NAA16Q6N069 864 aaPredicted RBP3.37□□□□□ -1.87
CCDC7-209ENST00000539197 DHRS11Q6UWP2 260 aa3.37□□□□□ -1.87
CCDC7-209ENST00000539197 IGFL2Q6UWQ7 119 aa3.37□□□□□ -1.87
CCDC7-209ENST00000539197 TNFRSF13CQ96RJ3 184 aa3.37□□□□□ -1.87
CCDC7-209ENST00000539197 NUDT16L1Q9BRJ7 211 aaKnown RBP3.37□□□□□ -1.87
CCDC7-209ENST00000539197 DEFB126Q9BYW3 111 aa3.37□□□□□ -1.87
CCDC7-209ENST00000539197 MAF1Q9H063 256 aa3.37□□□□□ -1.87
CCDC7-209ENST00000539197 MYOZ2Q9NPC6 264 aa3.37□□□□□ -1.87
CCDC7-209ENST00000539197 PLSCR3Q9NRY6 295 aa3.37□□□□□ -1.87
CCDC7-209ENST00000539197 PKD2L2Q9NZM6 624 aa3.37□□□□□ -1.87
CCDC7-209ENST00000539197 CLEC4EQ9ULY5 219 aa3.37□□□□□ -1.87
CCDC7-209ENST00000539197 MGAT4AQ9UM21 535 aa3.37□□□□□ -1.87
CCDC7-209ENST00000539197 EDDM13A0A1B0GTR0 161 aa3.36□□□□□ -1.87
CCDC7-209ENST00000539197 ADAM20O43506 726 aa3.36□□□□□ -1.87
CCDC7-209ENST00000539197 KIF5CO60282 957 aa3.36□□□□□ -1.87
CCDC7-209ENST00000539197 CELF2O95319 508 aaKnown RBP3.36□□□□□ -1.87
CCDC7-209ENST00000539197 IGHG3P01860 377 aa3.36□□□□□ -1.87
CCDC7-209ENST00000539197 PROS1P07225 676 aa3.36□□□□□ -1.87
CCDC7-209ENST00000539197 STAG3L1P0CL83 205 aa3.36□□□□□ -1.87
CCDC7-209ENST00000539197 GPX3P22352 226 aa3.36□□□□□ -1.87
CCDC7-209ENST00000539197 RPL9P32969 192 aaKnown RBP3.36□□□□□ -1.87
CCDC7-209ENST00000539197 HSD17B3P37058 310 aa3.36□□□□□ -1.87
CCDC7-209ENST00000539197 CCL14Q16627 93 aa3.36□□□□□ -1.87
CCDC7-209ENST00000539197 BMP2KLQ5H9B9 411 aa3.36□□□□□ -1.87
CCDC7-209ENST00000539197 TEX35Q5T0J7 233 aa3.36□□□□□ -1.87
CCDC7-209ENST00000539197 CFAP58Q5T655 872 aa3.36□□□□□ -1.87
CCDC7-209ENST00000539197 TTC27Q6P3X3 843 aa3.36□□□□□ -1.87
CCDC7-209ENST00000539197 Q6ZVQ6 151 aa3.36□□□□□ -1.87
CCDC7-209ENST00000539197 NME8Q8N427 588 aa3.36□□□□□ -1.87
CCDC7-209ENST00000539197 POMGNT2Q8NAT1 580 aa3.36□□□□□ -1.87
CCDC7-209ENST00000539197 SEPT1Q8WYJ6 367 aa3.36□□□□□ -1.87
CCDC7-209ENST00000539197 ALKBH3Q96Q83 286 aaPredicted RBP3.36□□□□□ -1.87
CCDC7-209ENST00000539197 MAPKAP1Q9BPZ7 522 aa3.36□□□□□ -1.87
CCDC7-209ENST00000539197 FNDC4Q9H6D8 234 aaPredicted RBP3.36□□□□□ -1.87
CCDC7-209ENST00000539197 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.36□□□□□ -1.87
CCDC7-209ENST00000539197 MAGED1Q9Y5V3 778 aaPredicted RBP3.36□□□□□ -1.87
CCDC7-209ENST00000539197 CPQQ9Y646 472 aa3.36□□□□□ -1.87
CCDC7-209ENST00000539197 TEX48A0A1B0GUV7 120 aa3.35□□□□□ -1.87
CCDC7-209ENST00000539197 BCLAF3A2AJT9 711 aaKnown RBP3.35□□□□□ -1.87
CCDC7-209ENST00000539197 OR52Z1P0C646 297 aa3.35□□□□□ -1.87
CCDC7-209ENST00000539197 LIMK1P53667 647 aa3.35□□□□□ -1.87
CCDC7-209ENST00000539197 ACSM1Q08AH1 577 aa3.35□□□□□ -1.87
CCDC7-209ENST00000539197 ECSCRQ19T08 205 aa3.35□□□□□ -1.87
CCDC7-209ENST00000539197 WDR78Q5VTH9 848 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms