RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 MLIPQ5VWP3 458 aa12.39□□□□□ -0.43
CHFR-216ENST00000538235 LIPMQ5VYY2 423 aa12.39□□□□□ -0.43
CHFR-216ENST00000538235 LIPJQ5W064 366 aa12.39□□□□□ -0.43
CHFR-216ENST00000538235 PPP1R32Q7Z5V6 425 aa12.39□□□□□ -0.43
CHFR-216ENST00000538235 PRSS58Q8IYP2 241 aa12.39□□□□□ -0.43
CHFR-216ENST00000538235 CCNYL1Q8N7R7 359 aa12.39□□□□□ -0.43
CHFR-216ENST00000538235 CDYL2Q8N8U2 506 aa12.39□□□□□ -0.43
CHFR-216ENST00000538235 CCT6BQ92526 530 aa12.39□□□□□ -0.43
CHFR-216ENST00000538235 MTFMTQ96DP5 389 aaKnown RBP12.39□□□□□ -0.43
CHFR-216ENST00000538235 MMABQ96EY8 250 aaPredicted RBP12.39□□□□□ -0.43
CHFR-216ENST00000538235 CSF3RQ99062 836 aa12.39□□□□□ -0.43
CHFR-216ENST00000538235 CAPS2Q9BXY5 557 aa12.39□□□□□ -0.43
CHFR-216ENST00000538235 NLNQ9BYT8 704 aa12.39□□□□□ -0.43
CHFR-216ENST00000538235 C20orf27Q9GZN8 174 aa12.39□□□□□ -0.43
CHFR-216ENST00000538235 ZNF304Q9HCX3 659 aa12.39□□□□□ -0.43
CHFR-216ENST00000538235 SSU72Q9NP77 194 aaKnown RBP12.39□□□□□ -0.43
CHFR-216ENST00000538235 PRDM7Q9NQW5 492 aa12.39□□□□□ -0.43
CHFR-216ENST00000538235 LANCL2Q9NS86 450 aa12.39□□□□□ -0.43
CHFR-216ENST00000538235 TCFL5Q9UL49 500 aa12.39□□□□□ -0.43
CHFR-216ENST00000538235 TSC22D4Q9Y3Q8 395 aa12.39□□□□□ -0.43
CHFR-216ENST00000538235 TIMM22Q9Y584 194 aa12.39□□□□□ -0.43
CHFR-216ENST00000538235 CLDN16Q9Y5I7 305 aa12.39□□□□□ -0.43
CHFR-216ENST00000538235 SLC22A7Q9Y694 548 aa12.39□□□□□ -0.43
CHFR-216ENST00000538235 ATRXP46100 2492 aa12.39□□□□□ -0.43
CHFR-216ENST00000538235 TMEM120BA0PK00 339 aa12.38□□□□□ -0.43
CHFR-216ENST00000538235 PLPP1O14494 284 aa12.38□□□□□ -0.43
CHFR-216ENST00000538235 RRP8O43159 456 aaKnown RBP12.38□□□□□ -0.43
CHFR-216ENST00000538235 ERI3O43414 337 aaKnown RBP12.38□□□□□ -0.43
CHFR-216ENST00000538235 ITM2AO43736 263 aa12.38□□□□□ -0.43
CHFR-216ENST00000538235 UGDHO60701 494 aa12.38□□□□□ -0.43
CHFR-216ENST00000538235 ALOX12BO75342 701 aa12.38□□□□□ -0.43
CHFR-216ENST00000538235 LYPLA1O75608 230 aaPredicted RBP12.38□□□□□ -0.43
CHFR-216ENST00000538235 RECKO95980 971 aa12.38□□□□□ -0.43
CHFR-216ENST00000538235 PDYNP01213 254 aa12.38□□□□□ -0.43
CHFR-216ENST00000538235 HBQ1P09105 142 aa12.38□□□□□ -0.43
CHFR-216ENST00000538235 RAB40ALP0C0E4 278 aa12.38□□□□□ -0.43
CHFR-216ENST00000538235 FBLP22087 321 aaKnown RBP12.38□□□□□ -0.43
CHFR-216ENST00000538235 PLA2G16P53816 162 aa12.38□□□□□ -0.43
CHFR-216ENST00000538235 CXADRP78310 365 aa12.38□□□□□ -0.43
CHFR-216ENST00000538235 CDC20Q12834 499 aa12.38□□□□□ -0.43
CHFR-216ENST00000538235 LCP2Q13094 533 aa12.38□□□□□ -0.43
CHFR-216ENST00000538235 FAM214AQ32MH5 1076 aa12.38□□□□□ -0.43
CHFR-216ENST00000538235 CPZQ66K79 652 aa12.38□□□□□ -0.43
CHFR-216ENST00000538235 ABHD17CQ6PCB6 329 aa12.38□□□□□ -0.43
CHFR-216ENST00000538235 SCIMPQ6UWF3 145 aa12.38□□□□□ -0.43
CHFR-216ENST00000538235 RIPOR1Q6ZS17 1223 aa12.38□□□□□ -0.43
CHFR-216ENST00000538235 GPRIN3Q6ZVF9 776 aa12.38□□□□□ -0.43
CHFR-216ENST00000538235 OVCH1Q7RTY7 1134 aa12.38□□□□□ -0.43
CHFR-216ENST00000538235 SLC22A9Q8IVM8 553 aa12.38□□□□□ -0.43
CHFR-216ENST00000538235 KRT78Q8N1N4 520 aa12.38□□□□□ -0.43
CHFR-216ENST00000538235 CA13Q8N1Q1 262 aa12.38□□□□□ -0.43
CHFR-216ENST00000538235 CCDC63Q8NA47 563 aa12.38□□□□□ -0.43
CHFR-216ENST00000538235 STT3BQ8TCJ2 826 aa12.38□□□□□ -0.43
CHFR-216ENST00000538235 SNRNP27Q8WVK2 155 aaKnown RBP12.38□□□□□ -0.43
CHFR-216ENST00000538235 GAL3ST3Q96A11 431 aa12.38□□□□□ -0.43
CHFR-216ENST00000538235 FKBP10Q96AY3 582 aa12.38□□□□□ -0.43
CHFR-216ENST00000538235 C17orf62Q9BQA9 187 aa12.38□□□□□ -0.43
CHFR-216ENST00000538235 SLC7A5P2Q9GIP4 190 aa12.38□□□□□ -0.43
CHFR-216ENST00000538235 PITHD1Q9GZP4 211 aaPredicted RBP12.38□□□□□ -0.43
CHFR-216ENST00000538235 SLC26A1Q9H2B4 701 aa12.38□□□□□ -0.43
CHFR-216ENST00000538235 SENP1Q9P0U3 644 aa12.38□□□□□ -0.43
CHFR-216ENST00000538235 IFT80Q9P2H3 777 aaPredicted RBP12.38□□□□□ -0.43
CHFR-216ENST00000538235 TRPS1Q9UHF7 1281 aa12.38□□□□□ -0.43
CHFR-216ENST00000538235 FARSAQ9Y285 508 aaKnown RBP12.38□□□□□ -0.43
CHFR-216ENST00000538235 ACTL7BQ9Y614 415 aa12.38□□□□□ -0.43
CHFR-216ENST00000538235 WDR91A4D1P6 747 aa12.37□□□□□ -0.43
CHFR-216ENST00000538235 C21orf140B9A014 251 aa12.37□□□□□ -0.43
CHFR-216ENST00000538235 FAM227AF5H4B4 570 aa12.37□□□□□ -0.43
CHFR-216ENST00000538235 MANBAO00462 879 aa12.37□□□□□ -0.43
CHFR-216ENST00000538235 H2AFYO75367 372 aaKnown RBP12.37□□□□□ -0.43
CHFR-216ENST00000538235 EEDO75530 441 aaKnown RBP12.37□□□□□ -0.43
CHFR-216ENST00000538235 PRKRAO75569 313 aaKnown RBP12.37□□□□□ -0.43
CHFR-216ENST00000538235 CREG1O75629 220 aa12.37□□□□□ -0.43
CHFR-216ENST00000538235 KLK3P07288 261 aaPredicted RBP12.37□□□□□ -0.43
CHFR-216ENST00000538235 MYZAPP0CAP1 466 aa12.37□□□□□ -0.43
CHFR-216ENST00000538235 SERPINB3P29508 390 aa12.37□□□□□ -0.43
CHFR-216ENST00000538235 KLC1Q07866 573 aa12.37□□□□□ -0.43
CHFR-216ENST00000538235 RGS1Q08116 209 aa12.37□□□□□ -0.43
CHFR-216ENST00000538235 LAPTM5Q13571 262 aa12.37□□□□□ -0.43
CHFR-216ENST00000538235 SGO1Q5FBB7 561 aa12.37□□□□□ -0.43
CHFR-216ENST00000538235 PAGE2BQ5JRK9 111 aa12.37□□□□□ -0.43
CHFR-216ENST00000538235 AGBL2Q5U5Z8 902 aa12.37□□□□□ -0.43
CHFR-216ENST00000538235 FRG2Q64ET8 278 aa12.37□□□□□ -0.43
CHFR-216ENST00000538235 CLEC6AQ6EIG7 209 aa12.37□□□□□ -0.43
CHFR-216ENST00000538235 CCDC81Q6ZN84 652 aa12.37□□□□□ -0.43
CHFR-216ENST00000538235 MILR1Q7Z6M3 343 aa12.37□□□□□ -0.43
CHFR-216ENST00000538235 ANKRD42Q8N9B4 389 aa12.37□□□□□ -0.43
CHFR-216ENST00000538235 TRPV3Q8NET8 790 aa12.37□□□□□ -0.43
CHFR-216ENST00000538235 OR2L5Q8NG80 312 aa12.37□□□□□ -0.43
CHFR-216ENST00000538235 UCN3Q969E3 161 aa12.37□□□□□ -0.43
CHFR-216ENST00000538235 MVB12AQ96EY5 273 aa12.37□□□□□ -0.43
CHFR-216ENST00000538235 FRG2BQ96QU4 278 aa12.37□□□□□ -0.43
CHFR-216ENST00000538235 DPH2Q9BQC3 489 aaPredicted RBP12.37□□□□□ -0.43
CHFR-216ENST00000538235 TUBB1Q9H4B7 451 aa12.37□□□□□ -0.43
CHFR-216ENST00000538235 MID1IP1Q9NPA3 183 aa12.37□□□□□ -0.43
CHFR-216ENST00000538235 TRPC4Q9UBN4 977 aa12.37□□□□□ -0.43
CHFR-216ENST00000538235 RALYQ9UKM9 306 aaKnown RBP12.37□□□□□ -0.43
CHFR-216ENST00000538235 PTRH2Q9Y3E5 179 aaKnown RBP12.37□□□□□ -0.43
CHFR-216ENST00000538235 ANKDD1BA6NHY2 528 aa12.36□□□□□ -0.43
CHFR-216ENST00000538235 H0YIG0 161 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms