RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 PAGE2Q7Z2X7 111 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 CLEC1AQ8NC01 280 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 OR7G3Q8NG95 312 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 ASB11Q8WXH4 323 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 UBE2E3Q969T4 207 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 REPS1Q96D71 796 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 SGSM3Q96HU1 749 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 TMEM120AQ9BXJ8 343 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 ASPSCR1Q9BZE9 553 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 SPNS1Q9H2V7 528 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 KIR3DX1Q9H7L2 352 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 RMI1Q9H9A7 625 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 KCNK13Q9HB14 408 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 ZNF446Q9NWS9 450 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 CDC14AQ9UNH5 594 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 SLC17A4Q9Y2C5 497 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 E2F6O75461 281 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 WFS1O76024 890 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 KLHL18O94889 574 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 MLYCDO95822 493 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 PDYNP01213 254 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 SNRPB2P08579 225 aaKnown RBP6.91□□□□□ -1.3
MSH6-209ENST00000538136 MDH1P40925 334 aaKnown RBP6.91□□□□□ -1.3
MSH6-209ENST00000538136 KCNJ5P48544 419 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 XKP51811 444 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 BTG2P78543 158 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 PRDX1Q06830 199 aaKnown RBP6.91□□□□□ -1.3
MSH6-209ENST00000538136 NKAIN1Q4KMZ8 207 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 FIGNL1Q6PIW4 674 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 C16orf62Q7Z3J2 963 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 SPATA24Q86W54 205 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 KRTCAP2Q8N6L1 136 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 OR52E6Q96RD3 313 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 FAIM2Q9BWQ8 316 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 PRRG4Q9BZD6 226 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 ZNF304Q9HCX3 659 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 NUDT4Q9NZJ9 180 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 MAT2BQ9NZL9 334 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 OR6C2Q9NZP2 312 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 DLGAP2Q9P1A6 1054 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 VPS29Q9UBQ0 182 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 COPS7AQ9UBW8 275 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 SH2B3Q9UQQ2 575 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 GMNCA6NCL1 334 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 EVPLLA8MZ36 301 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 SEC14L5O43304 696 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 SOX30O94993 753 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 CCNDBP1O95273 360 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 BPGMP07738 259 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 NR2F1P10589 423 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 CBLP22681 906 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 CLCN7P51798 805 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 ALDH6A1Q02252 535 aaKnown RBP6.91□□□□□ -1.3
MSH6-209ENST00000538136 FAM174BQ3ZCQ3 159 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 LETMD1Q6P1Q0 360 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 PAOXQ6QHF9 649 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 LAPTM4BQ86VI4 370 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 CLYBLQ8N0X4 340 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 NETO1Q8TDF5 533 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 TSLPQ969D9 159 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 DGAT2Q96PD7 388 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 SEPHS2Q99611 448 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 LPAR4Q99677 370 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 DMXL1Q9Y485 3027 aa6.9□□□□□ -1.3
MSH6-209ENST00000538136 TNFRSF10CO14798 259 aa6.9□□□□□ -1.3
MSH6-209ENST00000538136 FOLR3P41439 243 aa6.9□□□□□ -1.3
MSH6-209ENST00000538136 KIAA1024LP59773 190 aa6.9□□□□□ -1.3
MSH6-209ENST00000538136 DPTQ07507 201 aa6.9□□□□□ -1.3
MSH6-209ENST00000538136 PPP1R8Q12972 351 aaKnown RBP6.9□□□□□ -1.3
MSH6-209ENST00000538136 EXOSC7Q15024 291 aaKnown RBP6.9□□□□□ -1.3
MSH6-209ENST00000538136 OR4F3Q6IEY1 312 aa6.9□□□□□ -1.3
MSH6-209ENST00000538136 NXPE4Q6UWF7 544 aa6.9□□□□□ -1.3
MSH6-209ENST00000538136 CHMP1BQ7LBR1 199 aa6.9□□□□□ -1.3
MSH6-209ENST00000538136 SPATA21Q7Z572 469 aa6.9□□□□□ -1.3
MSH6-209ENST00000538136 SYVN1Q86TM6 617 aa6.9□□□□□ -1.3
MSH6-209ENST00000538136 SNX32Q86XE0 403 aa6.9□□□□□ -1.3
MSH6-209ENST00000538136 IQCKQ8N0W5 287 aa6.9□□□□□ -1.3
MSH6-209ENST00000538136 CADM2Q8N3J6 435 aa6.9□□□□□ -1.3
MSH6-209ENST00000538136 VANGL1Q8TAA9 524 aaPredicted RBP6.9□□□□□ -1.3
MSH6-209ENST00000538136 SEC14L1Q92503 715 aa6.9□□□□□ -1.3
MSH6-209ENST00000538136 FIG4Q92562 907 aa6.9□□□□□ -1.3
MSH6-209ENST00000538136 THTPAQ9BU02 230 aa6.9□□□□□ -1.3
MSH6-209ENST00000538136 DNAAF2Q9NVR5 837 aaKnown RBP6.9□□□□□ -1.3
MSH6-209ENST00000538136 IL17BQ9UHF5 180 aa6.9□□□□□ -1.3
MSH6-209ENST00000538136 PLCL2Q9UPR0 1127 aa6.9□□□□□ -1.3
MSH6-209ENST00000538136 MAN2B2Q9Y2E5 1009 aa6.9□□□□□ -1.3
MSH6-209ENST00000538136 NPIPA5A0A0B4J1W7 369 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 NPIPA7E9PJI5 369 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 TXNDC9O14530 226 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 CHST10O43529 356 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 HCRTR1O43613 425 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 SOD1P00441 154 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 IL3P08700 152 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 GSTM1P09488 218 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 NPIPA8P0DM63 369 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 UMPSP11172 480 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 FDXRP22570 491 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 WDR4P57081 412 aaKnown RBP6.9□□□□□ -1.31
MSH6-209ENST00000538136 ERVPABLB-1P60509 514 aa6.9□□□□□ -1.31
MSH6-209ENST00000538136 LY6DQ14210 128 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms