RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 CCR2P41597 374 aa13.46□□□□□ -0.25
LIG1-203ENST00000536218 DGKQP52824 942 aa13.46□□□□□ -0.25
LIG1-203ENST00000536218 RAB25P57735 213 aa13.46□□□□□ -0.25
LIG1-203ENST00000536218 IL2P60568 153 aa13.46□□□□□ -0.25
LIG1-203ENST00000536218 UBE3AQ05086 875 aa13.46□□□□□ -0.25
LIG1-203ENST00000536218 MAD2L1BPQ15013 274 aaPredicted RBP13.46□□□□□ -0.25
LIG1-203ENST00000536218 DGKKQ5KSL6 1271 aa13.46□□□□□ -0.25
LIG1-203ENST00000536218 PTRHD1Q6GMV3 140 aaKnown RBP13.46□□□□□ -0.25
LIG1-203ENST00000536218 KIF18BQ86Y91 864 aa13.46□□□□□ -0.25
LIG1-203ENST00000536218 TCTE3Q8IZS6 198 aa13.46□□□□□ -0.25
LIG1-203ENST00000536218 LINC00518Q8N0U6 118 aa13.46□□□□□ -0.25
LIG1-203ENST00000536218 ANKRD53Q8N9V6 530 aa13.46□□□□□ -0.25
LIG1-203ENST00000536218 FUBP1Q96AE4 644 aaKnown RBP13.46□□□□□ -0.25
LIG1-203ENST00000536218 L3HYPDHQ96EM0 354 aa13.46□□□□□ -0.25
LIG1-203ENST00000536218 PDLIM5Q96HC4 596 aaKnown RBP13.46□□□□□ -0.25
LIG1-203ENST00000536218 ZFYVE1Q9HBF4 777 aa13.46□□□□□ -0.25
LIG1-203ENST00000536218 C5orf42Q9H799 3197 aa13.46□□□□□ -0.25
LIG1-203ENST00000536218 CHD7Q9P2D1 2997 aa13.46□□□□□ -0.25
LIG1-203ENST00000536218 DIRAS1O95057 198 aa13.46□□□□□ -0.26
LIG1-203ENST00000536218 PRAMEF1O95521 474 aa13.46□□□□□ -0.26
LIG1-203ENST00000536218 C1QBP02746 253 aa13.46□□□□□ -0.26
LIG1-203ENST00000536218 HOXB8P17481 243 aaPredicted RBP13.46□□□□□ -0.26
LIG1-203ENST00000536218 KELP23276 732 aa13.46□□□□□ -0.26
LIG1-203ENST00000536218 SUOXP51687 545 aa13.46□□□□□ -0.26
LIG1-203ENST00000536218 ERVFC1P60507 584 aa13.46□□□□□ -0.26
LIG1-203ENST00000536218 CREMQ03060 361 aa13.46□□□□□ -0.26
LIG1-203ENST00000536218 HYAL2Q12891 473 aa13.46□□□□□ -0.26
LIG1-203ENST00000536218 ZBTB37Q5TC79 503 aa13.46□□□□□ -0.26
LIG1-203ENST00000536218 NDUFAF5Q5TEU4 345 aa13.46□□□□□ -0.26
LIG1-203ENST00000536218 XKRXQ6PP77 449 aa13.46□□□□□ -0.26
LIG1-203ENST00000536218 PLET1Q6UQ28 207 aa13.46□□□□□ -0.26
LIG1-203ENST00000536218 FAM131AQ6UXB0 335 aa13.46□□□□□ -0.26
LIG1-203ENST00000536218 SLC46A3Q7Z3Q1 461 aa13.46□□□□□ -0.26
LIG1-203ENST00000536218 PRSS42Q7Z5A4 293 aa13.46□□□□□ -0.26
LIG1-203ENST00000536218 TSPAN33Q86UF1 283 aa13.46□□□□□ -0.26
LIG1-203ENST00000536218 PHYKPLQ8IUZ5 450 aa13.46□□□□□ -0.26
LIG1-203ENST00000536218 PIH1D2Q8WWB5 315 aa13.46□□□□□ -0.26
LIG1-203ENST00000536218 DNASE1L2Q92874 299 aa13.46□□□□□ -0.26
LIG1-203ENST00000536218 TCF25Q9BQ70 676 aa13.46□□□□□ -0.26
LIG1-203ENST00000536218 TRMOQ9BU70 441 aa13.46□□□□□ -0.26
LIG1-203ENST00000536218 C11orf49Q9H6J7 331 aa13.46□□□□□ -0.26
LIG1-203ENST00000536218 SMURF1Q9HCE7 757 aa13.46□□□□□ -0.26
LIG1-203ENST00000536218 KIF17Q9P2E2 1029 aa13.46□□□□□ -0.26
LIG1-203ENST00000536218 CLCA3PQ9Y6N3 262 aa13.46□□□□□ -0.26
LIG1-203ENST00000536218 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.45□□□□□ -0.26
LIG1-203ENST00000536218 ANKRD28O15084 1053 aa13.45□□□□□ -0.26
LIG1-203ENST00000536218 BET1O15155 118 aa13.45□□□□□ -0.26
LIG1-203ENST00000536218 KERAO60938 352 aa13.45□□□□□ -0.26
LIG1-203ENST00000536218 CTSAP10619 480 aa13.45□□□□□ -0.26
LIG1-203ENST00000536218 ZNF30P17039 623 aa13.45□□□□□ -0.26
LIG1-203ENST00000536218 ITGALP20701 1170 aa13.45□□□□□ -0.26
LIG1-203ENST00000536218 PPM1AP35813 382 aa13.45□□□□□ -0.26
LIG1-203ENST00000536218 NRIP1P48552 1158 aa13.45□□□□□ -0.26
LIG1-203ENST00000536218 ZNF33BQ06732 778 aa13.45□□□□□ -0.26
LIG1-203ENST00000536218 TNK1Q13470 666 aa13.45□□□□□ -0.26
LIG1-203ENST00000536218 RBBP7Q16576 425 aa13.45□□□□□ -0.26
LIG1-203ENST00000536218 C18orf21Q32NC0 220 aaPredicted RBP13.45□□□□□ -0.26
LIG1-203ENST00000536218 COQ5Q5HYK3 327 aa13.45□□□□□ -0.26
LIG1-203ENST00000536218 ZNF697Q5TEC3 545 aa13.45□□□□□ -0.26
LIG1-203ENST00000536218 ANKS6Q68DC2 871 aa13.45□□□□□ -0.26
LIG1-203ENST00000536218 SERPINA9Q86WD7 417 aa13.45□□□□□ -0.26
LIG1-203ENST00000536218 LAX1Q8IWV1 398 aa13.45□□□□□ -0.26
LIG1-203ENST00000536218 ZNF675Q8TD23 568 aa13.45□□□□□ -0.26
LIG1-203ENST00000536218 GIMAP5Q96F15 307 aa13.45□□□□□ -0.26
LIG1-203ENST00000536218 CDK15Q96Q40 435 aa13.45□□□□□ -0.26
LIG1-203ENST00000536218 USB1Q9BQ65 265 aaKnown RBP13.45□□□□□ -0.26
LIG1-203ENST00000536218 DERL2Q9GZP9 239 aa13.45□□□□□ -0.26
LIG1-203ENST00000536218 ZBP1Q9H171 429 aa13.45□□□□□ -0.26
LIG1-203ENST00000536218 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.45□□□□□ -0.263e-7■□□□□ 10.4
LIG1-203ENST00000536218 MCUBQ9NWR8 336 aa13.45□□□□□ -0.26
LIG1-203ENST00000536218 CXXC1Q9P0U4 656 aaPredicted RBP13.45□□□□□ -0.26
LIG1-203ENST00000536218 ASB1Q9Y576 335 aa13.45□□□□□ -0.26
LIG1-203ENST00000536218 LILRB3O75022 631 aa13.45□□□□□ -0.26
LIG1-203ENST00000536218 GUCA1CO95843 209 aa13.45□□□□□ -0.26
LIG1-203ENST00000536218 FCER2P06734 321 aa13.45□□□□□ -0.26
LIG1-203ENST00000536218 HNF1BP35680 557 aa13.45□□□□□ -0.26
LIG1-203ENST00000536218 TEKQ02763 1124 aa13.45□□□□□ -0.26
LIG1-203ENST00000536218 GRM7Q14831 915 aa13.45□□□□□ -0.26
LIG1-203ENST00000536218 LIPIQ6XZB0 460 aa13.45□□□□□ -0.26
LIG1-203ENST00000536218 ATG16L2Q8NAA4 619 aa13.45□□□□□ -0.26
LIG1-203ENST00000536218 NLGN4YQ8NFZ3 816 aaPredicted RBP13.45□□□□□ -0.26
LIG1-203ENST00000536218 CD200R1Q8TD46 325 aa13.45□□□□□ -0.26
LIG1-203ENST00000536218 MARVELD3Q96A59 401 aa13.45□□□□□ -0.26
LIG1-203ENST00000536218 HBEGFQ99075 208 aa13.45□□□□□ -0.26
LIG1-203ENST00000536218 CIPCQ9C0C6 399 aa13.45□□□□□ -0.26
LIG1-203ENST00000536218 NIPAL2Q9H841 368 aa13.45□□□□□ -0.26
LIG1-203ENST00000536218 VNN3Q9NY84 501 aa13.45□□□□□ -0.26
LIG1-203ENST00000536218 DIMT1Q9UNQ2 313 aaKnown RBP13.45□□□□□ -0.26
LIG1-203ENST00000536218 FZD6O60353 706 aa13.44□□□□□ -0.26
LIG1-203ENST00000536218 SSTR4P31391 388 aa13.44□□□□□ -0.26
LIG1-203ENST00000536218 TGM4P49221 684 aa13.44□□□□□ -0.26
LIG1-203ENST00000536218 AKR1D1P51857 326 aa13.44□□□□□ -0.26
LIG1-203ENST00000536218 C6orf132Q5T0Z8 1188 aa13.44□□□□□ -0.26
LIG1-203ENST00000536218 TMEM81Q6P7N7 255 aa13.44□□□□□ -0.26
LIG1-203ENST00000536218 ZNF783Q6ZMS7 281 aa13.44□□□□□ -0.26
LIG1-203ENST00000536218 TMEM25Q86YD3 366 aa13.44□□□□□ -0.26
LIG1-203ENST00000536218 GPSM1Q86YR5 675 aa13.44□□□□□ -0.26
LIG1-203ENST00000536218 FAM217AQ8IXS0 508 aa13.44□□□□□ -0.26
LIG1-203ENST00000536218 NKAPQ8N5F7 415 aaKnown RBP13.44□□□□□ -0.26
LIG1-203ENST00000536218 RHEBL1Q8TAI7 183 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms