RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 ESRRBO95718 433 aa12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 SLC35G6P0C7Q6 338 aa12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 PCBP4P57723 403 aaKnown RBP12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 ASPHQ12797 758 aa12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 CLN3Q13286 438 aa12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 FAM53BQ14153 422 aa12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 MUM1Q2TAK8 710 aa12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 CFAP157Q5JU67 520 aa12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 C1orf189Q5VU69 101 aa12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 TTLL10Q6ZVT0 673 aa12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 NUDCD3Q8IVD9 361 aa12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 ESX1Q8N693 406 aa12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 KDF1Q8NAX2 398 aaPredicted RBP12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 HUS1BQ8NHY5 278 aa12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 UTP15Q8TED0 518 aaKnown RBP12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 CLIP3Q96DZ5 547 aa12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 CHMP6Q96FZ7 201 aa12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 MAGEB10Q96LZ2 347 aaPredicted RBP12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 TRMOQ9BU70 441 aa12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 MS4A8Q9BY19 250 aa12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 NLNQ9BYT8 704 aa12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 LHX9Q9NQ69 397 aa12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 A0A1B0GVG6 124 aa12.08□□□□□ -0.48
RPUSD4-208ENST00000533628 WDR91A4D1P6 747 aa12.08□□□□□ -0.48
RPUSD4-208ENST00000533628 ANKDD1BA6NHY2 528 aa12.08□□□□□ -0.48
RPUSD4-208ENST00000533628 SERPINB1P30740 379 aa12.08□□□□□ -0.48
RPUSD4-208ENST00000533628 STAT5AP42229 794 aa12.08□□□□□ -0.48
RPUSD4-208ENST00000533628 PIK3CBP42338 1070 aa12.08□□□□□ -0.48
RPUSD4-208ENST00000533628 NEK2P51955 445 aa12.08□□□□□ -0.48
RPUSD4-208ENST00000533628 FOXA1P55317 472 aa12.08□□□□□ -0.48
RPUSD4-208ENST00000533628 GALNT1Q10472 559 aaPredicted RBP12.08□□□□□ -0.48
RPUSD4-208ENST00000533628 MYBPC3Q14896 1274 aa12.08□□□□□ -0.48
RPUSD4-208ENST00000533628 PRSS41Q7RTY9 318 aa12.08□□□□□ -0.48
RPUSD4-208ENST00000533628 PDSS2Q86YH6 399 aa12.08□□□□□ -0.48
RPUSD4-208ENST00000533628 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.08□□□□□ -0.48
RPUSD4-208ENST00000533628 MS4A6EQ96DS6 147 aa12.08□□□□□ -0.48
RPUSD4-208ENST00000533628 DRC3Q9H069 523 aa12.08□□□□□ -0.48
RPUSD4-208ENST00000533628 MID1IP1Q9NPA3 183 aa12.08□□□□□ -0.48
RPUSD4-208ENST00000533628 DMRT3Q9NQL9 472 aa12.08□□□□□ -0.48
RPUSD4-208ENST00000533628 ADGRE2Q9UHX3 823 aa12.08□□□□□ -0.48
RPUSD4-208ENST00000533628 PADI1Q9ULC6 663 aa12.08□□□□□ -0.48
RPUSD4-208ENST00000533628 PPT2Q9UMR5 302 aa12.08□□□□□ -0.48
RPUSD4-208ENST00000533628 LRRC42Q9Y546 428 aa12.08□□□□□ -0.48
RPUSD4-208ENST00000533628 ASPMQ8IZT6 3477 aa12.08□□□□□ -0.48
RPUSD4-208ENST00000533628 LOC101059948A0A1B0GTJ6 334 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 FOXE1O00358 373 aaPredicted RBP12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 FFAR3O14843 346 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 GPR42O15529 346 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 SERPIND1P05546 499 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 CHRNGP07510 517 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 PCNAP12004 261 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 EIF2S3P41091 472 aaKnown RBP12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 RGS1Q08116 209 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 ABHD18Q0P651 414 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 RCN2Q14257 317 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 ARL13AQ5H913 290 aaPredicted RBP12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 TOR1AIP1Q5JTV8 583 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 TCHHL1Q5QJ38 904 aaPredicted RBP12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 FRG2Q64ET8 278 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 FAM199XQ6PEV8 388 aaPredicted RBP12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 FAM198BQ6UWH4 519 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 COX15Q7KZN9 410 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 UBE3DQ7Z6J8 389 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 PROSER1Q86XN7 944 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 TRIM42Q8IWZ5 723 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 CDYL2Q8N8U2 506 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 ZNF248Q8NDW4 579 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 MVB12AQ96EY5 273 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 FRG2BQ96QU4 278 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 KCNA7Q96RP8 456 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 DPH2Q9BQC3 489 aaPredicted RBP12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 SLC29A3Q9BZD2 475 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 CHST8Q9H2A9 424 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 FARSBQ9NSD9 589 aaKnown RBP12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 TXLNGQ9NUQ3 528 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 TMEM8BA6NDV4 472 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 MAGEB17A8MXT2 336 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 ETHE1O95571 254 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 B3GALT4O96024 378 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 SERPINE1P05121 402 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 ENO1P06733 434 aaKnown RBP12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 KLK3P07288 261 aaPredicted RBP12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 ZNF888P0CJ79 500 aaPredicted RBP12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 BGNP21810 368 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 ALAS2P22557 587 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 SERPINB5P36952 375 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 OR1D4P47884 311 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 DCDP81605 110 aaKnown RBP12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 CHI3L2Q15782 390 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 NDUFA9Q16795 377 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 NKAIN1Q4KMZ8 207 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 PRMT9Q6P2P2 845 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 SHISA5Q8N114 240 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 AMER3Q8N944 861 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 ZCCHC10Q8TBK6 192 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 MGARPQ8TDB4 240 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 CT55Q8WUE5 264 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 REPS1Q96D71 796 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 QRFPRQ96P65 431 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 F2RL3Q96RI0 385 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms