RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 CXCR2P25025 360 aa17.66■□□□□ 0.42
SMPD1-208ENST00000533123 CD1CP29017 333 aa17.66■□□□□ 0.42
SMPD1-208ENST00000533123 RPS13P62277 151 aaKnown RBP17.66■□□□□ 0.42
SMPD1-208ENST00000533123 REEP5Q00765 189 aa17.66■□□□□ 0.42
SMPD1-208ENST00000533123 CFHR1Q03591 330 aa17.66■□□□□ 0.42
SMPD1-208ENST00000533123 RABL3Q5HYI8 236 aa17.66■□□□□ 0.42
SMPD1-208ENST00000533123 SAMD4BQ5PRF9 694 aaKnown RBP17.66■□□□□ 0.42
SMPD1-208ENST00000533123 LAS2Q8IYD9 372 aa17.66■□□□□ 0.42
SMPD1-208ENST00000533123 ANKRD53Q8N9V6 530 aa17.66■□□□□ 0.42
SMPD1-208ENST00000533123 TMEM9BQ9NQ34 198 aa17.66■□□□□ 0.42
SMPD1-208ENST00000533123 SUCOQ9UBS9 1254 aaKnown RBP17.66■□□□□ 0.42
SMPD1-208ENST00000533123 KLHL3Q9UH77 587 aa17.66■□□□□ 0.42
SMPD1-208ENST00000533123 MDC1Q14676 2089 aaKnown RBP17.65■□□□□ 0.42
SMPD1-208ENST00000533123 A0A0J9YY10 115 aa17.65■□□□□ 0.42
SMPD1-208ENST00000533123 OR1F1O43749 312 aa17.65■□□□□ 0.42
SMPD1-208ENST00000533123 BCAS2O75934 225 aaPredicted RBP17.65■□□□□ 0.42
SMPD1-208ENST00000533123 LINGO3P0C6S8 592 aa17.65■□□□□ 0.42
SMPD1-208ENST00000533123 ANPEPP15144 967 aa17.65■□□□□ 0.42
SMPD1-208ENST00000533123 PNLIPP16233 465 aa17.65■□□□□ 0.42
SMPD1-208ENST00000533123 CDH3P22223 829 aa17.65■□□□□ 0.42
SMPD1-208ENST00000533123 TGM1P22735 817 aa17.65■□□□□ 0.42
SMPD1-208ENST00000533123 AP2B1P63010 937 aa17.65■□□□□ 0.42
SMPD1-208ENST00000533123 GPLD1P80108 840 aa17.65■□□□□ 0.42
SMPD1-208ENST00000533123 SLC34A1Q06495 639 aa17.65■□□□□ 0.42
SMPD1-208ENST00000533123 ZNF33BQ06732 778 aa17.65■□□□□ 0.42
SMPD1-208ENST00000533123 FCRL6Q6DN72 434 aa17.65■□□□□ 0.42
SMPD1-208ENST00000533123 FIGLAQ6QHK4 219 aa17.65■□□□□ 0.42
SMPD1-208ENST00000533123 DHDDSQ86SQ9 333 aa17.65■□□□□ 0.42
SMPD1-208ENST00000533123 GFM2Q969S9 779 aaKnown RBP17.65■□□□□ 0.42
SMPD1-208ENST00000533123 ASB9Q96DX5 294 aa17.65■□□□□ 0.42
SMPD1-208ENST00000533123 FCRL4Q96PJ5 515 aa17.65■□□□□ 0.42
SMPD1-208ENST00000533123 MAP3K3Q99759 626 aa17.65■□□□□ 0.42
SMPD1-208ENST00000533123 CCDC3Q9BQI4 270 aa17.65■□□□□ 0.42
SMPD1-208ENST00000533123 TMED5Q9Y3A6 229 aa17.65■□□□□ 0.42
SMPD1-208ENST00000533123 PCDHA9Q9Y5H5 950 aa17.65■□□□□ 0.42
SMPD1-208ENST00000533123 FLRT2O43155 660 aa17.64■□□□□ 0.42
SMPD1-208ENST00000533123 ZW10O43264 779 aa17.64■□□□□ 0.42
SMPD1-208ENST00000533123 TNFSF14O43557 240 aa17.64■□□□□ 0.42
SMPD1-208ENST00000533123 DUX1O43812 170 aa17.64■□□□□ 0.42
SMPD1-208ENST00000533123 DNAJA2O60884 412 aa17.64■□□□□ 0.42
SMPD1-208ENST00000533123 FKBP6O75344 327 aa17.64■□□□□ 0.42
SMPD1-208ENST00000533123 BAG2O95816 211 aa17.64■□□□□ 0.42
SMPD1-208ENST00000533123 CD59P13987 128 aa17.64■□□□□ 0.42
SMPD1-208ENST00000533123 HRH2P25021 359 aa17.64■□□□□ 0.42
SMPD1-208ENST00000533123 GRK3P35626 688 aa17.64■□□□□ 0.42
SMPD1-208ENST00000533123 C6orf10Q5SRN2 563 aa17.64■□□□□ 0.42
SMPD1-208ENST00000533123 PRMT9Q6P2P2 845 aa17.64■□□□□ 0.42
SMPD1-208ENST00000533123 RNF111Q6ZNA4 994 aa17.64■□□□□ 0.42
SMPD1-208ENST00000533123 PAQR7Q86WK9 346 aa17.64■□□□□ 0.42
SMPD1-208ENST00000533123 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.64■□□□□ 0.42
SMPD1-208ENST00000533123 SLC13A3Q8WWT9 602 aa17.64■□□□□ 0.42
SMPD1-208ENST00000533123 NAT6Q93015 286 aa17.64■□□□□ 0.42
SMPD1-208ENST00000533123 TMEM125Q96AQ2 219 aa17.64■□□□□ 0.42
SMPD1-208ENST00000533123 REPS1Q96D71 796 aa17.64■□□□□ 0.42
SMPD1-208ENST00000533123 TMEM74Q96NL1 305 aa17.64■□□□□ 0.42
SMPD1-208ENST00000533123 BRF2Q9HAW0 419 aa17.64■□□□□ 0.42
SMPD1-208ENST00000533123 PPT2Q9UMR5 302 aa17.64■□□□□ 0.42
SMPD1-208ENST00000533123 ZNF292O60281 2723 aa17.64■□□□□ 0.41
SMPD1-208ENST00000533123 GDF9O60383 454 aa17.64■□□□□ 0.41
SMPD1-208ENST00000533123 PGRP06401 933 aa17.64■□□□□ 0.41
SMPD1-208ENST00000533123 PRPS2P11908 318 aa17.64■□□□□ 0.41
SMPD1-208ENST00000533123 HSD3B1P14060 373 aa17.64■□□□□ 0.41
SMPD1-208ENST00000533123 ST6GAL1P15907 406 aa17.64■□□□□ 0.41
SMPD1-208ENST00000533123 HSD3B2P26439 372 aa17.64■□□□□ 0.41
SMPD1-208ENST00000533123 CLDN8P56748 225 aa17.64■□□□□ 0.41
SMPD1-208ENST00000533123 CYP4F2P78329 520 aa17.64■□□□□ 0.41
SMPD1-208ENST00000533123 MRPS22P82650 360 aaKnown RBP17.64■□□□□ 0.41
SMPD1-208ENST00000533123 FOXM1Q08050 763 aa17.64■□□□□ 0.41
SMPD1-208ENST00000533123 SLC14A1Q13336 389 aa17.64■□□□□ 0.41
SMPD1-208ENST00000533123 TRIM25Q14258 630 aaKnown RBP17.64■□□□□ 0.41
SMPD1-208ENST00000533123 ZIC1Q15915 447 aa17.64■□□□□ 0.41
SMPD1-208ENST00000533123 INAVAQ3KP66 663 aa17.64■□□□□ 0.41
SMPD1-208ENST00000533123 AASDHQ4L235 1098 aaPredicted RBP17.64■□□□□ 0.41
SMPD1-208ENST00000533123 CMPK2Q5EBM0 449 aa17.64■□□□□ 0.41
SMPD1-208ENST00000533123 DLEU7Q6UYE1 221 aa17.64■□□□□ 0.41
SMPD1-208ENST00000533123 VN1R5Q7Z5H4 357 aa17.64■□□□□ 0.41
SMPD1-208ENST00000533123 DPP10Q8N608 796 aa17.64■□□□□ 0.41
SMPD1-208ENST00000533123 IFI44Q8TCB0 444 aa17.64■□□□□ 0.41
SMPD1-208ENST00000533123 UBE2E3Q969T4 207 aa17.64■□□□□ 0.41
SMPD1-208ENST00000533123 ZUFSPQ96AP4 578 aa17.64■□□□□ 0.41
SMPD1-208ENST00000533123 CNDP2Q96KP4 475 aaKnown RBP17.64■□□□□ 0.41
SMPD1-208ENST00000533123 FCRL1Q96LA6 429 aa17.64■□□□□ 0.41
SMPD1-208ENST00000533123 SEMA6CQ9H3T2 930 aa17.64■□□□□ 0.41
SMPD1-208ENST00000533123 SYNPO2LQ9H987 977 aa17.64■□□□□ 0.41
SMPD1-208ENST00000533123 TMEM9Q9P0T7 183 aa17.64■□□□□ 0.41
SMPD1-208ENST00000533123 DYTNA2CJ06 578 aa17.63■□□□□ 0.41
SMPD1-208ENST00000533123 OR2A25A4D2G3 310 aa17.63■□□□□ 0.41
SMPD1-208ENST00000533123 C4orf47A7E2U8 309 aa17.63■□□□□ 0.41
SMPD1-208ENST00000533123 SH3BP5O60239 455 aa17.63■□□□□ 0.41
SMPD1-208ENST00000533123 CTSVO60911 334 aa17.63■□□□□ 0.41
SMPD1-208ENST00000533123 LRP3O75074 770 aa17.63■□□□□ 0.41
SMPD1-208ENST00000533123 B3GALT4O96024 378 aa17.63■□□□□ 0.41
SMPD1-208ENST00000533123 MAPK1P28482 360 aa17.63■□□□□ 0.41
SMPD1-208ENST00000533123 CSF2RBP32927 897 aa17.63■□□□□ 0.41
SMPD1-208ENST00000533123 BCL6P41182 706 aa17.63■□□□□ 0.41
SMPD1-208ENST00000533123 CYP4F3Q08477 520 aa17.63■□□□□ 0.41
SMPD1-208ENST00000533123 ACSM2AQ08AH3 577 aa17.63■□□□□ 0.41
SMPD1-208ENST00000533123 ACSM2BQ68CK6 577 aa17.63■□□□□ 0.41
SMPD1-208ENST00000533123 AAGABQ6PD74 315 aa17.63■□□□□ 0.41
SMPD1-208ENST00000533123 C1orf52Q8N6N3 182 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms