RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 TRABD2AQ86V40 505 aa15.73■□□□□ 0.11
PKP3-209ENST00000533069 KRT78Q8N1N4 520 aa15.73■□□□□ 0.11
PKP3-209ENST00000533069 ANKRD53Q8N9V6 530 aa15.73■□□□□ 0.11
PKP3-209ENST00000533069 PPP4R1Q8TF05 950 aa15.73■□□□□ 0.11
PKP3-209ENST00000533069 SMC6Q96SB8 1091 aa15.73■□□□□ 0.11
PKP3-209ENST00000533069 WDR77Q9BQA1 342 aaPredicted RBP15.73■□□□□ 0.11
PKP3-209ENST00000533069 TMEM79Q9BSE2 394 aa15.73■□□□□ 0.11
PKP3-209ENST00000533069 SLC6A16Q9GZN6 736 aa15.73■□□□□ 0.11
PKP3-209ENST00000533069 ILKAPQ9H0C8 392 aaPredicted RBP15.73■□□□□ 0.11
PKP3-209ENST00000533069 EHD1Q9H4M9 534 aa15.73■□□□□ 0.11
PKP3-209ENST00000533069 NUDT4Q9NZJ9 180 aa15.73■□□□□ 0.11
PKP3-209ENST00000533069 CD274Q9NZQ7 290 aa15.73■□□□□ 0.11
PKP3-209ENST00000533069 COPG2Q9UBF2 871 aa15.73■□□□□ 0.11
PKP3-209ENST00000533069 ACOT9Q9Y305 439 aa15.73■□□□□ 0.11
PKP3-209ENST00000533069 SPENQ96T58 3664 aaKnown RBP15.73■□□□□ 0.11
PKP3-209ENST00000533069 A0A087X1B8 175 aa15.72■□□□□ 0.11
PKP3-209ENST00000533069 TRIM49D1C9J1S8 452 aa15.72■□□□□ 0.11
PKP3-209ENST00000533069 TAPBPO15533 448 aa15.72■□□□□ 0.11
PKP3-209ENST00000533069 VPS4BO75351 444 aa15.72■□□□□ 0.11
PKP3-209ENST00000533069 JRKO75564 520 aa15.72■□□□□ 0.11
PKP3-209ENST00000533069 ZIC2O95409 532 aaPredicted RBP15.72■□□□□ 0.11
PKP3-209ENST00000533069 SERPINA6P08185 405 aa15.72■□□□□ 0.11
PKP3-209ENST00000533069 LTA4HP09960 611 aaKnown RBP15.72■□□□□ 0.11
PKP3-209ENST00000533069 ZNF888P0CJ79 500 aaPredicted RBP15.72■□□□□ 0.11
PKP3-209ENST00000533069 COL6A2P12110 1019 aa15.72■□□□□ 0.11
PKP3-209ENST00000533069 TFEBP19484 476 aa15.72■□□□□ 0.11
PKP3-209ENST00000533069 TYK2P29597 1187 aa15.72■□□□□ 0.11
PKP3-209ENST00000533069 AGTR2P50052 363 aa15.72■□□□□ 0.11
PKP3-209ENST00000533069 MFAP5Q13361 173 aa15.72■□□□□ 0.11
PKP3-209ENST00000533069 SLBPQ14493 270 aaKnown RBP eCLIP15.72■□□□□ 0.11
PKP3-209ENST00000533069 PCOLCEQ15113 449 aa15.72■□□□□ 0.11
PKP3-209ENST00000533069 INPP5JQ15735 1006 aaPredicted RBP15.72■□□□□ 0.11
PKP3-209ENST00000533069 PDK4Q16654 411 aa15.72■□□□□ 0.11
PKP3-209ENST00000533069 CRB2Q5IJ48 1285 aa15.72■□□□□ 0.11
PKP3-209ENST00000533069 MROH9Q5TGP6 573 aa15.72■□□□□ 0.11
PKP3-209ENST00000533069 ISLR2Q6UXK2 745 aa15.72■□□□□ 0.11
PKP3-209ENST00000533069 TMIGD1Q6UXZ0 262 aa15.72■□□□□ 0.11
PKP3-209ENST00000533069 Q6ZS92 163 aa15.72■□□□□ 0.11
PKP3-209ENST00000533069 GALNT11Q8NCW6 608 aa15.72■□□□□ 0.11
PKP3-209ENST00000533069 TLCD1Q96CP7 247 aa15.72■□□□□ 0.11
PKP3-209ENST00000533069 TUBB6Q9BUF5 446 aa15.72■□□□□ 0.11
PKP3-209ENST00000533069 ALG9Q9H6U8 611 aa15.72■□□□□ 0.11
PKP3-209ENST00000533069 NT5DC2Q9H857 520 aa15.72■□□□□ 0.11
PKP3-209ENST00000533069 PTBP2Q9UKA9 531 aaKnown RBP15.72■□□□□ 0.11
PKP3-209ENST00000533069 VPS4AQ9UN37 437 aa15.72■□□□□ 0.11
PKP3-209ENST00000533069 PCM1Q15154 2024 aa15.72■□□□□ 0.11
PKP3-209ENST00000533069 HEATR5BQ9P2D3 2071 aa15.71■□□□□ 0.11
PKP3-209ENST00000533069 ASH1LQ9NR48 2969 aaKnown RBP15.71■□□□□ 0.11
PKP3-209ENST00000533069 ZNF860A6NHJ4 632 aa15.71■□□□□ 0.11
PKP3-209ENST00000533069 CLGNO14967 610 aa15.71■□□□□ 0.11
PKP3-209ENST00000533069 KERAO60938 352 aa15.71■□□□□ 0.11
PKP3-209ENST00000533069 GSTA1P08263 222 aa15.71■□□□□ 0.11
PKP3-209ENST00000533069 PRR35P0CG20 571 aa15.71■□□□□ 0.11
PKP3-209ENST00000533069 JAK1P23458 1154 aa15.71■□□□□ 0.11
PKP3-209ENST00000533069 HPDP32754 393 aaPredicted RBP15.71■□□□□ 0.11
PKP3-209ENST00000533069 MAGEA12P43365 314 aa15.71■□□□□ 0.11
PKP3-209ENST00000533069 HSPA7P48741 367 aa15.71■□□□□ 0.11
PKP3-209ENST00000533069 EFNA3P52797 238 aa15.71■□□□□ 0.11
PKP3-209ENST00000533069 STXBP1P61764 594 aaKnown RBP15.71■□□□□ 0.11
PKP3-209ENST00000533069 PLEKHN1Q494U1 663 aaPredicted RBP15.71■□□□□ 0.11
PKP3-209ENST00000533069 LRRC70Q7Z2Q7 622 aa15.71■□□□□ 0.11
PKP3-209ENST00000533069 ISCA2Q86U28 154 aa15.71■□□□□ 0.11
PKP3-209ENST00000533069 ARFGAP2Q8N6H7 521 aa15.71■□□□□ 0.11
PKP3-209ENST00000533069 SNX31Q8N9S9 440 aa15.71■□□□□ 0.11
PKP3-209ENST00000533069 UTP15Q8TED0 518 aaKnown RBP15.71■□□□□ 0.11
PKP3-209ENST00000533069 CREB3L4Q8TEY5 395 aa15.71■□□□□ 0.11
PKP3-209ENST00000533069 MZB1Q8WU39 189 aa15.71■□□□□ 0.11
PKP3-209ENST00000533069 TBC1D20Q96BZ9 403 aa15.71■□□□□ 0.11
PKP3-209ENST00000533069 LMF1Q96S06 567 aa15.71■□□□□ 0.11
PKP3-209ENST00000533069 EFCAB11Q9BUY7 163 aa15.71■□□□□ 0.11
PKP3-209ENST00000533069 ZBTB20Q9HC78 741 aaPredicted RBP15.71■□□□□ 0.11
PKP3-209ENST00000533069 IGSF5Q9NSI5 407 aa15.71■□□□□ 0.11
PKP3-209ENST00000533069 MKS1Q9NXB0 559 aa15.71■□□□□ 0.11
PKP3-209ENST00000533069 LUZP4Q9P127 313 aa15.71■□□□□ 0.11
PKP3-209ENST00000533069 NUP210LQ5VU65 1888 aa15.7■□□□□ 0.1
PKP3-209ENST00000533069 SYCE1LA8MT33 242 aa15.7■□□□□ 0.1
PKP3-209ENST00000533069 FHP07954 510 aa15.7■□□□□ 0.1
PKP3-209ENST00000533069 CCT5P48643 541 aa15.7■□□□□ 0.1
PKP3-209ENST00000533069 SLC18A1P54219 525 aa15.7■□□□□ 0.1
PKP3-209ENST00000533069 HYAL2Q12891 473 aa15.7■□□□□ 0.1
PKP3-209ENST00000533069 DLG1Q12959 904 aa15.7■□□□□ 0.1
PKP3-209ENST00000533069 BMPR2Q13873 1038 aa15.7■□□□□ 0.1
PKP3-209ENST00000533069 FAM83EQ2M2I3 478 aa15.7■□□□□ 0.1
PKP3-209ENST00000533069 PAGE2BQ5JRK9 111 aa15.7■□□□□ 0.1
PKP3-209ENST00000533069 CPEB2Q7Z5Q1 589 aaKnown RBP15.7■□□□□ 0.1
PKP3-209ENST00000533069 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.7■□□□□ 0.1
PKP3-209ENST00000533069 OR5T3Q8NGG3 340 aa15.7■□□□□ 0.1
PKP3-209ENST00000533069 RHEBL1Q8TAI7 183 aa15.7■□□□□ 0.1
PKP3-209ENST00000533069 EXT2Q93063 718 aa15.7■□□□□ 0.1
PKP3-209ENST00000533069 WDR34Q96EX3 536 aa15.7■□□□□ 0.1
PKP3-209ENST00000533069 PTCD3Q96EY7 689 aaKnown RBP15.7■□□□□ 0.1
PKP3-209ENST00000533069 PEX11GQ96HA9 241 aa15.7■□□□□ 0.1
PKP3-209ENST00000533069 IMMP1LQ96LU5 166 aa15.7■□□□□ 0.1
PKP3-209ENST00000533069 ATOH8Q96SQ7 321 aa15.7■□□□□ 0.1
PKP3-209ENST00000533069 SLC29A3Q9BZD2 475 aa15.7■□□□□ 0.1
PKP3-209ENST00000533069 CD244Q9BZW8 370 aa15.7■□□□□ 0.1
PKP3-209ENST00000533069 SNX15Q9NRS6 342 aa15.7■□□□□ 0.1
PKP3-209ENST00000533069 LANCL2Q9NS86 450 aa15.7■□□□□ 0.1
PKP3-209ENST00000533069 MED13Q9UHV7 2174 aa15.7■□□□□ 0.1
PKP3-209ENST00000533069 HMX2A2RU54 273 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms