RNA–Protein interactions for RNA: ENST00000520672.2

PCDHA2-202, Transcript of protocadherin alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHA2, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2-202ENST00000520672 PTRH1Q86Y79 214 aaKnown RBP13.35□□□□□ -0.27
PCDHA2-202ENST00000520672 DTWD1Q8N5C7 304 aa13.35□□□□□ -0.27
PCDHA2-202ENST00000520672 FBXO30Q8TB52 745 aa13.35□□□□□ -0.27
PCDHA2-202ENST00000520672 MCOLN3Q8TDD5 553 aa13.35□□□□□ -0.27
PCDHA2-202ENST00000520672 SCAMP4Q969E2 229 aa13.35□□□□□ -0.27
PCDHA2-202ENST00000520672 CEP19Q96LK0 163 aa13.35□□□□□ -0.27
PCDHA2-202ENST00000520672 MAGEB10Q96LZ2 347 aaPredicted RBP13.35□□□□□ -0.27
PCDHA2-202ENST00000520672 SECISBP2Q96T21 854 aaKnown RBP13.35□□□□□ -0.27
PCDHA2-202ENST00000520672 NSUN3Q9H649 340 aaKnown RBP13.35□□□□□ -0.27
PCDHA2-202ENST00000520672 IFT46Q9NQC8 304 aa13.35□□□□□ -0.27
PCDHA2-202ENST00000520672 G3V2T6 193 aa13.35□□□□□ -0.27
PCDHA2-202ENST00000520672 MATN4O95460 622 aa13.35□□□□□ -0.27
PCDHA2-202ENST00000520672 HOXD4P09016 255 aaPredicted RBP13.35□□□□□ -0.27
PCDHA2-202ENST00000520672 CD36P16671 472 aa13.35□□□□□ -0.27
PCDHA2-202ENST00000520672 FMO3P31513 532 aa13.35□□□□□ -0.27
PCDHA2-202ENST00000520672 PTGER3P43115 390 aa13.35□□□□□ -0.27
PCDHA2-202ENST00000520672 HSPA7P48741 367 aa13.35□□□□□ -0.27
PCDHA2-202ENST00000520672 MAP2K6P52564 334 aa13.35□□□□□ -0.27
PCDHA2-202ENST00000520672 SNRPD1P62314 119 aaKnown RBP13.35□□□□□ -0.27
PCDHA2-202ENST00000520672 TEKQ02763 1124 aa13.35□□□□□ -0.27
PCDHA2-202ENST00000520672 ZNF648Q5T619 568 aaPredicted RBP13.35□□□□□ -0.27
PCDHA2-202ENST00000520672 PNCKQ6P2M8 343 aa13.35□□□□□ -0.27
PCDHA2-202ENST00000520672 SYVN1Q86TM6 617 aa13.35□□□□□ -0.27
PCDHA2-202ENST00000520672 NKAPQ8N5F7 415 aaKnown RBP13.35□□□□□ -0.27
PCDHA2-202ENST00000520672 ITFG1Q8TB96 612 aa13.35□□□□□ -0.27
PCDHA2-202ENST00000520672 ST8SIA4Q92187 359 aa13.35□□□□□ -0.27
PCDHA2-202ENST00000520672 NOTCH4Q99466 2003 aa13.34□□□□□ -0.27
PCDHA2-202ENST00000520672 H3BQ06 376 aaPredicted RBP13.34□□□□□ -0.27
PCDHA2-202ENST00000520672 GNGT2O14610 69 aa13.34□□□□□ -0.27
PCDHA2-202ENST00000520672 FFAR3O14843 346 aa13.34□□□□□ -0.27
PCDHA2-202ENST00000520672 GPR42O15529 346 aa13.34□□□□□ -0.27
PCDHA2-202ENST00000520672 SLC22A3O75751 556 aa13.34□□□□□ -0.27
PCDHA2-202ENST00000520672 UMPSP11172 480 aa13.34□□□□□ -0.27
PCDHA2-202ENST00000520672 ZNF7P17097 686 aaPredicted RBP13.34□□□□□ -0.27
PCDHA2-202ENST00000520672 SUOXP51687 545 aa13.34□□□□□ -0.27
PCDHA2-202ENST00000520672 CSTF3Q12996 717 aaKnown RBP13.34□□□□□ -0.27
PCDHA2-202ENST00000520672 RCAN2Q14206 197 aa13.34□□□□□ -0.27
PCDHA2-202ENST00000520672 SPANXN2Q5MJ10 180 aa13.34□□□□□ -0.27
PCDHA2-202ENST00000520672 RBM48Q5RL73 367 aaKnown RBP13.34□□□□□ -0.27
PCDHA2-202ENST00000520672 C22orf39Q6P5X5 142 aa13.34□□□□□ -0.27
PCDHA2-202ENST00000520672 CRTC1Q6UUV9 634 aa13.34□□□□□ -0.27
PCDHA2-202ENST00000520672 ZNF783Q6ZMS7 281 aa13.34□□□□□ -0.27
PCDHA2-202ENST00000520672 LINC00299Q6ZSB3 139 aa13.34□□□□□ -0.27
PCDHA2-202ENST00000520672 ZNF767PQ75MW2 155 aa13.34□□□□□ -0.27
PCDHA2-202ENST00000520672 CACUL1Q86Y37 369 aa13.34□□□□□ -0.27
PCDHA2-202ENST00000520672 TIGD4Q8IY51 512 aa13.34□□□□□ -0.27
PCDHA2-202ENST00000520672 AMBRA1Q9C0C7 1298 aa13.34□□□□□ -0.27
PCDHA2-202ENST00000520672 FAM118AQ9NWS6 357 aa13.34□□□□□ -0.27
PCDHA2-202ENST00000520672 ZNF639Q9UID6 485 aa13.34□□□□□ -0.27
PCDHA2-202ENST00000520672 MBD1Q9UIS9 605 aaPredicted RBP13.34□□□□□ -0.27
PCDHA2-202ENST00000520672 PCOLCE2Q9UKZ9 415 aa13.34□□□□□ -0.27
PCDHA2-202ENST00000520672 TBC1D24Q9ULP9 559 aa13.34□□□□□ -0.27
PCDHA2-202ENST00000520672 LINC00587B1AMM8 73 aa13.34□□□□□ -0.27
PCDHA2-202ENST00000520672 SLC1A7O00341 560 aa13.34□□□□□ -0.27
PCDHA2-202ENST00000520672 FLYWCH1Q4VC44 716 aa13.34□□□□□ -0.27
PCDHA2-202ENST00000520672 ATP13A5Q4VNC0 1218 aa13.34□□□□□ -0.27
PCDHA2-202ENST00000520672 KANK2Q63ZY3 851 aa13.34□□□□□ -0.27
PCDHA2-202ENST00000520672 FAM109BQ6ICB4 259 aaPredicted RBP13.34□□□□□ -0.27
PCDHA2-202ENST00000520672 CES5AQ6NT32 575 aa13.34□□□□□ -0.27
PCDHA2-202ENST00000520672 SPESP1Q6UW49 350 aa13.34□□□□□ -0.27
PCDHA2-202ENST00000520672 PAPD5Q8NDF8 572 aaKnown RBP13.34□□□□□ -0.27
PCDHA2-202ENST00000520672 SUV39H2Q9H5I1 410 aa13.34□□□□□ -0.27
PCDHA2-202ENST00000520672 KCTD5Q9NXV2 234 aa13.34□□□□□ -0.27
PCDHA2-202ENST00000520672 GAPDHSO14556 408 aaPredicted RBP13.33□□□□□ -0.27
PCDHA2-202ENST00000520672 EFCAB14O75071 495 aa13.33□□□□□ -0.27
PCDHA2-202ENST00000520672 ESR1P03372 595 aa13.33□□□□□ -0.27
PCDHA2-202ENST00000520672 CYP4B1P13584 511 aa13.33□□□□□ -0.27
PCDHA2-202ENST00000520672 LHCGRP22888 699 aa13.33□□□□□ -0.27
PCDHA2-202ENST00000520672 ERP29P30040 261 aaKnown RBP13.33□□□□□ -0.27
PCDHA2-202ENST00000520672 AKT1P31749 480 aa13.33□□□□□ -0.27
PCDHA2-202ENST00000520672 VIPR2P41587 438 aa13.33□□□□□ -0.27
PCDHA2-202ENST00000520672 POLR2JP52435 117 aaKnown RBP13.33□□□□□ -0.27
PCDHA2-202ENST00000520672 LCP2Q13094 533 aa13.33□□□□□ -0.27
PCDHA2-202ENST00000520672 COMMD7Q86VX2 200 aa13.33□□□□□ -0.27
PCDHA2-202ENST00000520672 RHEBL1Q8TAI7 183 aa13.33□□□□□ -0.27
PCDHA2-202ENST00000520672 BPIFB1Q8TDL5 484 aa13.33□□□□□ -0.27
PCDHA2-202ENST00000520672 SLC5A11Q8WWX8 675 aa13.33□□□□□ -0.27
PCDHA2-202ENST00000520672 MTFMTQ96DP5 389 aaKnown RBP13.33□□□□□ -0.27
PCDHA2-202ENST00000520672 SLC25A13Q9UJS0 675 aa13.33□□□□□ -0.27
PCDHA2-202ENST00000520672 ZNF225Q9UK10 706 aa13.33□□□□□ -0.27
PCDHA2-202ENST00000520672 VPS9D1Q9Y2B5 631 aa13.33□□□□□ -0.27
PCDHA2-202ENST00000520672 HRH3Q9Y5N1 445 aa13.33□□□□□ -0.27
PCDHA2-202ENST00000520672 GFRA2O00451 464 aa13.33□□□□□ -0.28
PCDHA2-202ENST00000520672 FGF4P08620 206 aa13.33□□□□□ -0.28
PCDHA2-202ENST00000520672 RECQLP46063 649 aaPredicted RBP13.33□□□□□ -0.28
PCDHA2-202ENST00000520672 CAPZA2P47755 286 aa13.33□□□□□ -0.28
PCDHA2-202ENST00000520672 CLCN7P51798 805 aa13.33□□□□□ -0.28
PCDHA2-202ENST00000520672 KCNAB2Q13303 367 aa13.33□□□□□ -0.28
PCDHA2-202ENST00000520672 BOP1Q14137 746 aaKnown RBP13.33□□□□□ -0.28
PCDHA2-202ENST00000520672 TMEM240Q5SV17 173 aa13.33□□□□□ -0.28
PCDHA2-202ENST00000520672 ENPP6Q6UWR7 440 aa13.33□□□□□ -0.28
PCDHA2-202ENST00000520672 CAMKK1Q8N5S9 505 aa13.33□□□□□ -0.28
PCDHA2-202ENST00000520672 AADATQ8N5Z0 425 aa13.33□□□□□ -0.28
PCDHA2-202ENST00000520672 SPPL3Q8TCT6 385 aa13.33□□□□□ -0.28
PCDHA2-202ENST00000520672 KCNJ9Q92806 393 aa13.33□□□□□ -0.28
PCDHA2-202ENST00000520672 IRF7Q92985 503 aa13.33□□□□□ -0.28
PCDHA2-202ENST00000520672 PHF21AQ96BD5 680 aa13.33□□□□□ -0.28
PCDHA2-202ENST00000520672 MMP27Q9H306 513 aa13.33□□□□□ -0.28
PCDHA2-202ENST00000520672 CARS2Q9HA77 564 aaKnown RBP13.33□□□□□ -0.28
PCDHA2-202ENST00000520672 SLAMF7Q9NQ25 335 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms