RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 LHPPQ9H008 270 aa17.62■□□□□ 0.41
FAM49B-208ENST00000518344 EPN3Q9H201 632 aa17.62■□□□□ 0.41
FAM49B-208ENST00000518344 EPB41L4BQ9H329 900 aa17.62■□□□□ 0.41
FAM49B-208ENST00000518344 C5AR2Q9P296 337 aa17.62■□□□□ 0.41
FAM49B-208ENST00000518344 XPR1Q9UBH6 696 aa17.62■□□□□ 0.41
FAM49B-208ENST00000518344 TNPO3Q9Y5L0 923 aaKnown RBP17.62■□□□□ 0.41
FAM49B-208ENST00000518344 IGHV1-45A0A0A0MS14 117 aa17.61■□□□□ 0.41
FAM49B-208ENST00000518344 IGHV3-20A0A0C4DH32 117 aa17.61■□□□□ 0.41
FAM49B-208ENST00000518344 IQANK1A0A1B0GTG1 560 aa17.61■□□□□ 0.41
FAM49B-208ENST00000518344 C4orf51C9J302 202 aa17.61■□□□□ 0.41
FAM49B-208ENST00000518344 ERI3O43414 337 aaKnown RBP17.61■□□□□ 0.41
FAM49B-208ENST00000518344 KLK8O60259 260 aa17.61■□□□□ 0.41
FAM49B-208ENST00000518344 ZNF500O60304 480 aaPredicted RBP17.61■□□□□ 0.41
FAM49B-208ENST00000518344 B4GALT2O60909 372 aa17.61■□□□□ 0.41
FAM49B-208ENST00000518344 SMIM24O75264 130 aa17.61■□□□□ 0.41
FAM49B-208ENST00000518344 WFS1O76024 890 aa17.61■□□□□ 0.41
FAM49B-208ENST00000518344 SIX3O95343 332 aaPredicted RBP17.61■□□□□ 0.41
FAM49B-208ENST00000518344 FHP07954 510 aa17.61■□□□□ 0.41
FAM49B-208ENST00000518344 IL10P22301 178 aa17.61■□□□□ 0.41
FAM49B-208ENST00000518344 CASP2P42575 452 aa17.61■□□□□ 0.41
FAM49B-208ENST00000518344 PLA2G16P53816 162 aa17.61■□□□□ 0.41
FAM49B-208ENST00000518344 MED27Q6P2C8 311 aa17.61■□□□□ 0.41
FAM49B-208ENST00000518344 TIFABQ6ZNK6 161 aa17.61■□□□□ 0.41
FAM49B-208ENST00000518344 LANCL3Q6ZV70 420 aa17.61■□□□□ 0.41
FAM49B-208ENST00000518344 HPS6Q86YV9 775 aa17.61■□□□□ 0.41
FAM49B-208ENST00000518344 UBE2E3Q969T4 207 aa17.61■□□□□ 0.41
FAM49B-208ENST00000518344 GAL3ST3Q96A11 431 aa17.61■□□□□ 0.41
FAM49B-208ENST00000518344 PHF21BQ96EK2 531 aa17.61■□□□□ 0.41
FAM49B-208ENST00000518344 OR1F2PQ96R84 312 aa17.61■□□□□ 0.41
FAM49B-208ENST00000518344 REXO4Q9GZR2 422 aaKnown RBP17.61■□□□□ 0.41
FAM49B-208ENST00000518344 ZNF700Q9H0M5 742 aa17.61■□□□□ 0.41
FAM49B-208ENST00000518344 ACTR8Q9H981 624 aa17.61■□□□□ 0.41
FAM49B-208ENST00000518344 ZBTB20Q9HC78 741 aaPredicted RBP17.61■□□□□ 0.41
FAM49B-208ENST00000518344 PSMC3IPQ9P2W1 217 aaPredicted RBP17.61■□□□□ 0.41
FAM49B-208ENST00000518344 C19orf25Q9UFG5 118 aaPredicted RBP17.61■□□□□ 0.41
FAM49B-208ENST00000518344 TBK1Q9UHD2 729 aa17.61■□□□□ 0.41
FAM49B-208ENST00000518344 CFAP46Q8IYW2 2715 aa17.61■□□□□ 0.41
FAM49B-208ENST00000518344 LOC102723996A0A087X1L8 192 aa17.6■□□□□ 0.41
FAM49B-208ENST00000518344 PSMD12O00232 456 aaPredicted RBP17.6■□□□□ 0.41
FAM49B-208ENST00000518344 TBX6O95947 436 aaPredicted RBP17.6■□□□□ 0.41
FAM49B-208ENST00000518344 JAK1P23458 1154 aa17.6■□□□□ 0.41
FAM49B-208ENST00000518344 TNFRSF8P28908 595 aa17.6■□□□□ 0.41
FAM49B-208ENST00000518344 HPDP32754 393 aaPredicted RBP17.6■□□□□ 0.41
FAM49B-208ENST00000518344 GTF2H2Q13888 395 aa17.6■□□□□ 0.41
FAM49B-208ENST00000518344 PCOLCEQ15113 449 aa17.6■□□□□ 0.41
FAM49B-208ENST00000518344 PCBP2Q15366 365 aaKnown RBP eCLIP17.6■□□□□ 0.419e-8■■■■□ 22.9
FAM49B-208ENST00000518344 NSDHLQ15738 373 aa17.6■□□□□ 0.41
FAM49B-208ENST00000518344 AGAP7PQ5VUJ5 663 aa17.6■□□□□ 0.41
FAM49B-208ENST00000518344 GTF2H2CQ6P1K8 395 aa17.6■□□□□ 0.41
FAM49B-208ENST00000518344 TRIM40Q6P9F5 258 aa17.6■□□□□ 0.41
FAM49B-208ENST00000518344 CPEB2Q7Z5Q1 589 aaKnown RBP17.6■□□□□ 0.41
FAM49B-208ENST00000518344 AGAP4Q96P64 663 aa17.6■□□□□ 0.41
FAM49B-208ENST00000518344 F2RL3Q96RI0 385 aa17.6■□□□□ 0.41
FAM49B-208ENST00000518344 MRPL57Q9BQC6 102 aaKnown RBP17.6■□□□□ 0.41
FAM49B-208ENST00000518344 ANKZF1Q9H8Y5 726 aa17.6■□□□□ 0.41
FAM49B-208ENST00000518344 CLK4Q9HAZ1 481 aaKnown RBP17.6■□□□□ 0.41
FAM49B-208ENST00000518344 LANCL2Q9NS86 450 aa17.6■□□□□ 0.41
FAM49B-208ENST00000518344 RIC8BQ9NVN3 520 aa17.6■□□□□ 0.41
FAM49B-208ENST00000518344 A0A088AWK7 358 aa17.59■□□□□ 0.41
FAM49B-208ENST00000518344 TTLL8A6PVC2 850 aa17.59■□□□□ 0.41
FAM49B-208ENST00000518344 FAM227AF5H4B4 570 aa17.59■□□□□ 0.41
FAM49B-208ENST00000518344 SH3BGRLO75368 114 aa17.59■□□□□ 0.41
FAM49B-208ENST00000518344 SEC24DO94855 1032 aaPredicted RBP17.59■□□□□ 0.41
FAM49B-208ENST00000518344 CYC1P08574 325 aa17.59■□□□□ 0.41
FAM49B-208ENST00000518344 RNH1P13489 461 aaKnown RBP17.59■□□□□ 0.41
FAM49B-208ENST00000518344 ZNF10P21506 573 aaPredicted RBP17.59■□□□□ 0.41
FAM49B-208ENST00000518344 EEF1DP29692 281 aaKnown RBP17.59■□□□□ 0.41
FAM49B-208ENST00000518344 ARL1P40616 181 aaPredicted RBP17.59■□□□□ 0.41
FAM49B-208ENST00000518344 MLLT10P55197 1068 aa17.59■□□□□ 0.41
FAM49B-208ENST00000518344 ACTN3Q08043 901 aaPredicted RBP17.59■□□□□ 0.41
FAM49B-208ENST00000518344 TGM3Q08188 693 aa17.59■□□□□ 0.41
FAM49B-208ENST00000518344 ABRAXAS2Q15018 415 aa17.59■□□□□ 0.41
FAM49B-208ENST00000518344 GOLGA7Q7Z5G4 137 aa17.59■□□□□ 0.41
FAM49B-208ENST00000518344 ANKRD37Q7Z713 158 aa17.59■□□□□ 0.41
FAM49B-208ENST00000518344 LAS2Q8IYD9 372 aa17.59■□□□□ 0.41
FAM49B-208ENST00000518344 CA13Q8N1Q1 262 aa17.59■□□□□ 0.41
FAM49B-208ENST00000518344 AMER2Q8N7J2 671 aa17.59■□□□□ 0.41
FAM49B-208ENST00000518344 RBMXL3Q8N7X1 1067 aaKnown RBP17.59■□□□□ 0.41
FAM49B-208ENST00000518344 PLPP5Q8NEB5 264 aa17.59■□□□□ 0.41
FAM49B-208ENST00000518344 OR2L5Q8NG80 312 aa17.59■□□□□ 0.41
FAM49B-208ENST00000518344 OR7G3Q8NG95 312 aa17.59■□□□□ 0.41
FAM49B-208ENST00000518344 TM9SF4Q92544 642 aa17.59■□□□□ 0.41
FAM49B-208ENST00000518344 ATP6V1E2Q96A05 226 aa17.59■□□□□ 0.41
FAM49B-208ENST00000518344 TUBB6Q9BUF5 446 aa17.59■□□□□ 0.41
FAM49B-208ENST00000518344 MRPL46Q9H2W6 279 aaKnown RBP17.59■□□□□ 0.41
FAM49B-208ENST00000518344 IPPKQ9H8X2 491 aa17.59■□□□□ 0.41
FAM49B-208ENST00000518344 LUZP4Q9P127 313 aa17.59■□□□□ 0.41
FAM49B-208ENST00000518344 FETUBQ9UGM5 382 aa17.59■□□□□ 0.41
FAM49B-208ENST00000518344 TMCO1Q9UM00 188 aa17.59■□□□□ 0.41
FAM49B-208ENST00000518344 COL6A6A6NMZ7 2263 aa17.59■□□□□ 0.41
FAM49B-208ENST00000518344 A0A1W2PQ72 361 aa17.58■□□□□ 0.4
FAM49B-208ENST00000518344 GOLGA8RI6L899 631 aa17.58■□□□□ 0.4
FAM49B-208ENST00000518344 E2F3O00716 465 aa17.58■□□□□ 0.4
FAM49B-208ENST00000518344 B3GALT2O43825 422 aa17.58■□□□□ 0.4
FAM49B-208ENST00000518344 TGFB1P01137 390 aa17.58■□□□□ 0.4
FAM49B-208ENST00000518344 SHBGP04278 402 aa17.58■□□□□ 0.4
FAM49B-208ENST00000518344 SERPINA7P05543 415 aa17.58■□□□□ 0.4
FAM49B-208ENST00000518344 UQCRHP07919 91 aa17.58■□□□□ 0.4
FAM49B-208ENST00000518344 CELA2AP08217 269 aa17.58■□□□□ 0.4
FAM49B-208ENST00000518344 PRR35P0CG20 571 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms