RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 EPN3Q9H201 632 aa11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 OR51B5Q9H339 312 aa11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 DDX31Q9H8H2 851 aaKnown RBP11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 PRDM7Q9NQW5 492 aa11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 ASIC5Q9NY37 505 aa11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 KLHL14Q9P2G3 628 aa11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 MARCOQ9UEW3 520 aaPredicted RBP11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 SLC12A4Q9UP95 1085 aa11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 TMED5Q9Y3A6 229 aa11.39□□□□□ -0.59
PDLIM5-220ENST00000514830 SPEGQ15772 3267 aa11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 NUP210LQ5VU65 1888 aa11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 A0A088AWK7 358 aa11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 H0YIG0 161 aa11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 PLPP1O14494 284 aa11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 DSCR3O14972 297 aa11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 SKAP2O75563 359 aaPredicted RBP11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 DXOO77932 396 aaKnown RBP11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 NSA2O95478 260 aaKnown RBP11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 TGFB1P01137 390 aa11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 EIF2S1P05198 315 aaKnown RBP11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 CTSBP07858 339 aa11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 LINC00032P0C843 101 aa11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 ALOX12P18054 663 aa11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 ZNF10P21506 573 aaPredicted RBP11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 DRD4P21917 467 aa11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 BSGP35613 385 aa11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 GSTM5P46439 218 aa11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 CLDN6P56747 220 aa11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 IRX1P78414 480 aaPredicted RBP11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 FOXM1Q08050 763 aa11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 MAD2L1Q13257 205 aaPredicted RBP11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 PDCD2Q16342 344 aaPredicted RBP11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 IMPG1Q17R60 797 aa11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 SGO1Q5FBB7 561 aa11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 TOR1AIP1Q5JTV8 583 aa11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 DCAF12Q5T6F0 453 aa11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 PRMT9Q6P2P2 845 aa11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 TRIM40Q6P9F5 258 aa11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 MED25Q71SY5 747 aa11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 ZFAND4Q86XD8 727 aa11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 ZCCHC7Q8N3Z6 543 aaKnown RBP11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 RNF175Q8N4F7 328 aa11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 PROKR1Q8TCW9 393 aa11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 F2RL3Q96RI0 385 aa11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 NDC1Q9BTX1 674 aa11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 CCDC28BQ9BUN5 200 aa11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 NPLQ9BXD5 320 aaPredicted RBP11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 NUF2Q9BZD4 464 aa11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 SPRY4Q9C004 299 aa11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 NSRP1Q9H0G5 558 aaKnown RBP11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 KLHL31Q9H511 634 aa11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 POLR1BQ9H9Y6 1135 aa11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 KCNK13Q9HB14 408 aa11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 LHX9Q9NQ69 397 aa11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 CUTCQ9NTM9 273 aa11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 C1orf109Q9NX04 203 aa11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 SLC39A1Q9NY26 324 aa11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 ACSL6Q9UKU0 697 aa11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 WASF3Q9UPY6 502 aa11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 WBP11Q9Y2W2 641 aaKnown RBP11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 FIS1Q9Y3D6 152 aa11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 PCDHGA7Q9Y5G6 932 aa11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 SCN3AQ9NY46 2000 aa11.38□□□□□ -0.59
PDLIM5-220ENST00000514830 ANKRD11Q6UB99 2663 aaPredicted RBP11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 A0A1B0GX78 115 aa11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 C1QTNF9BB2RNN3 333 aa11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 C4orf51C9J302 202 aa11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 NVLO15381 856 aaKnown RBP11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 ZNF749O43361 778 aa11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 ERI3O43414 337 aaKnown RBP11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 FOXS1O43638 330 aa11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 HYAL3O43820 417 aaPredicted RBP11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 GALR3O60755 368 aaPredicted RBP11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 SCRG1O75711 98 aa11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 SERPIND1P05546 499 aa11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 C1QTNF9P0C862 333 aa11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 JMJD7P0C870 316 aa11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 ZNF888P0CJ79 500 aaPredicted RBP11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 KITP10721 976 aa11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 HIST1H1TP22492 207 aaPredicted RBP11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 ETV5P41161 510 aa11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 IDH3AP50213 366 aa11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 SEC24CP53992 1094 aa11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 TRA2BP62995 288 aaKnown RBP11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 HMGCS1Q01581 520 aa11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 CAMK2BQ13554 666 aa11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 MAP7Q14244 749 aa11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 RTP5Q14D33 572 aa11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 ATP6AP1LQ52LC2 224 aa11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 C6orf136Q5SQH8 315 aa11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 TMEM164Q5U3C3 297 aa11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 FAM219BQ5XKK7 198 aa11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 ZNF385CQ66K41 422 aaPredicted RBP11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 OR4C11Q6IEV9 310 aa11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 PWWP2BQ6NUJ5 590 aa11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 SCIMPQ6UWF3 145 aa11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 PAGE2Q7Z2X7 111 aa11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 CEP70Q8NHQ1 597 aa11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 SERINC2Q96SA4 455 aa11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 HBEGFQ99075 208 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms