RNA–Protein interactions for RNA: ENST00000508659.5

CLDND1-219, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 681 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-219ENST00000508659 FHP07954 510 aa16■□□□□ 0.15
CLDND1-219ENST00000508659 PCNAP12004 261 aa16■□□□□ 0.15
CLDND1-219ENST00000508659 EEF1DP29692 281 aaKnown RBP16■□□□□ 0.15
CLDND1-219ENST00000508659 SERPINB1P30740 379 aa16■□□□□ 0.15
CLDND1-219ENST00000508659 HNRNPH1P31943 449 aaKnown RBP16■□□□□ 0.15
CLDND1-219ENST00000508659 ARL1P40616 181 aaPredicted RBP16■□□□□ 0.15
CLDND1-219ENST00000508659 SOX8P57073 446 aa16■□□□□ 0.15
CLDND1-219ENST00000508659 PCBP2Q15366 365 aaKnown RBP eCLIP16■□□□□ 0.15
CLDND1-219ENST00000508659 ADNP2Q6IQ32 1131 aa16■□□□□ 0.15
CLDND1-219ENST00000508659 GRHL2Q6ISB3 625 aa16■□□□□ 0.15
CLDND1-219ENST00000508659 METTL2BQ6P1Q9 378 aaKnown RBP16■□□□□ 0.15
CLDND1-219ENST00000508659 MED27Q6P2C8 311 aa16■□□□□ 0.15
CLDND1-219ENST00000508659 TRIM40Q6P9F5 258 aa16■□□□□ 0.15
CLDND1-219ENST00000508659 TIFABQ6ZNK6 161 aa16■□□□□ 0.15
CLDND1-219ENST00000508659 NDUFAF7Q7L592 441 aa16■□□□□ 0.15
CLDND1-219ENST00000508659 PARP9Q8IXQ6 854 aa16■□□□□ 0.15
CLDND1-219ENST00000508659 TM9SF4Q92544 642 aa16■□□□□ 0.15
CLDND1-219ENST00000508659 TBC1D20Q96BZ9 403 aa16■□□□□ 0.15
CLDND1-219ENST00000508659 PHF21BQ96EK2 531 aa16■□□□□ 0.15
CLDND1-219ENST00000508659 SMAD5Q99717 465 aaKnown RBP16■□□□□ 0.15
CLDND1-219ENST00000508659 MRPL57Q9BQC6 102 aaKnown RBP16■□□□□ 0.15
CLDND1-219ENST00000508659 REXO4Q9GZR2 422 aaKnown RBP16■□□□□ 0.15
CLDND1-219ENST00000508659 KLHL31Q9H511 634 aa16■□□□□ 0.15
CLDND1-219ENST00000508659 COPS7BQ9H9Q2 264 aaPredicted RBP16■□□□□ 0.15
CLDND1-219ENST00000508659 TBK1Q9UHD2 729 aa16■□□□□ 0.15
CLDND1-219ENST00000508659 ZNF462Q96JM2 2506 aa15.99■□□□□ 0.15
CLDND1-219ENST00000508659 IGHV1-45A0A0A0MS14 117 aa15.99■□□□□ 0.15
CLDND1-219ENST00000508659 LRIT2A6NDA9 550 aa15.99■□□□□ 0.15
CLDND1-219ENST00000508659 LRRC14BA6NHZ5 514 aa15.99■□□□□ 0.15
CLDND1-219ENST00000508659 CHST10O43529 356 aa15.99■□□□□ 0.15
CLDND1-219ENST00000508659 WFS1O76024 890 aa15.99■□□□□ 0.15
CLDND1-219ENST00000508659 SIX3O95343 332 aaPredicted RBP15.99■□□□□ 0.15
CLDND1-219ENST00000508659 UQCRHP07919 91 aa15.99■□□□□ 0.15
CLDND1-219ENST00000508659 CASRP41180 1078 aa15.99■□□□□ 0.15
CLDND1-219ENST00000508659 CASP2P42575 452 aa15.99■□□□□ 0.15
CLDND1-219ENST00000508659 EFNA3P52797 238 aa15.99■□□□□ 0.15
CLDND1-219ENST00000508659 BTN3A2P78410 334 aa15.99■□□□□ 0.15
CLDND1-219ENST00000508659 TGM3Q08188 693 aa15.99■□□□□ 0.15
CLDND1-219ENST00000508659 GTF2H2Q13888 395 aa15.99■□□□□ 0.15
CLDND1-219ENST00000508659 E2F2Q14209 437 aa15.99■□□□□ 0.15
CLDND1-219ENST00000508659 ABRAXAS2Q15018 415 aa15.99■□□□□ 0.15
CLDND1-219ENST00000508659 GTF2H2CQ6P1K8 395 aa15.99■□□□□ 0.15
CLDND1-219ENST00000508659 TMEM205Q6UW68 189 aa15.99■□□□□ 0.15
CLDND1-219ENST00000508659 GOLGA7Q7Z5G4 137 aa15.99■□□□□ 0.15
CLDND1-219ENST00000508659 VN1R5Q7Z5H4 357 aa15.99■□□□□ 0.15
CLDND1-219ENST00000508659 LCA5Q86VQ0 697 aa15.99■□□□□ 0.15
CLDND1-219ENST00000508659 KBTBD2Q8IY47 623 aa15.99■□□□□ 0.15
CLDND1-219ENST00000508659 SHISA5Q8N114 240 aa15.99■□□□□ 0.15
CLDND1-219ENST00000508659 OR2L5Q8NG80 312 aa15.99■□□□□ 0.15
CLDND1-219ENST00000508659 MS4A6EQ96DS6 147 aa15.99■□□□□ 0.15
CLDND1-219ENST00000508659 THOC3Q96J01 351 aaKnown RBP15.99■□□□□ 0.15
CLDND1-219ENST00000508659 TRIM4Q9C037 500 aa15.99■□□□□ 0.15
CLDND1-219ENST00000508659 AICDAQ9GZX7 198 aa15.99■□□□□ 0.15
CLDND1-219ENST00000508659 LHPPQ9H008 270 aa15.99■□□□□ 0.15
CLDND1-219ENST00000508659 EPN3Q9H201 632 aa15.99■□□□□ 0.15
CLDND1-219ENST00000508659 RHBGQ9H310 441 aa15.99■□□□□ 0.15
CLDND1-219ENST00000508659 ZNF552Q9H707 407 aaPredicted RBP15.99■□□□□ 0.15
CLDND1-219ENST00000508659 PPCSQ9HAB8 311 aa15.99■□□□□ 0.15
CLDND1-219ENST00000508659 CLK4Q9HAZ1 481 aaKnown RBP15.99■□□□□ 0.15
CLDND1-219ENST00000508659 C5AR2Q9P296 337 aa15.99■□□□□ 0.15
CLDND1-219ENST00000508659 LOC102723996A0A087X1L8 192 aa15.98■□□□□ 0.15
CLDND1-219ENST00000508659 A0A0G2JN53 185 aa15.98■□□□□ 0.15
CLDND1-219ENST00000508659 STX16-NPEPL1H3BU86 382 aa15.98■□□□□ 0.15
CLDND1-219ENST00000508659 E2F3O00716 465 aa15.98■□□□□ 0.15
CLDND1-219ENST00000508659 STX16O14662 325 aa15.98■□□□□ 0.15
CLDND1-219ENST00000508659 B3GALT2O43825 422 aa15.98■□□□□ 0.15
CLDND1-219ENST00000508659 SMIM10L1P0DMW3 83 aa15.98■□□□□ 0.15
CLDND1-219ENST00000508659 RNH1P13489 461 aaKnown RBP15.98■□□□□ 0.15
CLDND1-219ENST00000508659 PLA2G16P53816 162 aa15.98■□□□□ 0.15
CLDND1-219ENST00000508659 VSNL1P62760 191 aa15.98■□□□□ 0.15
CLDND1-219ENST00000508659 AP2B1P63010 937 aa15.98■□□□□ 0.15
CLDND1-219ENST00000508659 PCDH1Q08174 1060 aa15.98■□□□□ 0.15
CLDND1-219ENST00000508659 PCOLCEQ15113 449 aa15.98■□□□□ 0.15
CLDND1-219ENST00000508659 ADPRMQ3LIE5 342 aa15.98■□□□□ 0.15
CLDND1-219ENST00000508659 COLEC12Q5KU26 742 aa15.98■□□□□ 0.15
CLDND1-219ENST00000508659 NUP210LQ5VU65 1888 aa15.98■□□□□ 0.15
CLDND1-219ENST00000508659 LANCL3Q6ZV70 420 aa15.98■□□□□ 0.15
CLDND1-219ENST00000508659 LAS2Q8IYD9 372 aa15.98■□□□□ 0.15
CLDND1-219ENST00000508659 ACMSDQ8TDX5 336 aa15.98■□□□□ 0.15
CLDND1-219ENST00000508659 REPS1Q96D71 796 aa15.98■□□□□ 0.15
CLDND1-219ENST00000508659 SMIM10Q96HG1 83 aa15.98■□□□□ 0.15
CLDND1-219ENST00000508659 TUBB6Q9BUF5 446 aa15.98■□□□□ 0.15
CLDND1-219ENST00000508659 IPPKQ9H8X2 491 aa15.98■□□□□ 0.15
CLDND1-219ENST00000508659 LANCL2Q9NS86 450 aa15.98■□□□□ 0.15
CLDND1-219ENST00000508659 ZNF490Q9ULM2 529 aaPredicted RBP15.98■□□□□ 0.15
CLDND1-219ENST00000508659 SMIM23A6NLE4 172 aa15.97■□□□□ 0.15
CLDND1-219ENST00000508659 J3QKU1 62 aa15.97■□□□□ 0.15
CLDND1-219ENST00000508659 UGDHO60701 494 aa15.97■□□□□ 0.15
CLDND1-219ENST00000508659 SHBGP04278 402 aa15.97■□□□□ 0.15
CLDND1-219ENST00000508659 SLCO1A2P46721 670 aa15.97■□□□□ 0.15
CLDND1-219ENST00000508659 PHEXP78562 749 aa15.97■□□□□ 0.15
CLDND1-219ENST00000508659 TLE1Q04724 770 aa15.97■□□□□ 0.15
CLDND1-219ENST00000508659 Q0VFX4 171 aa15.97■□□□□ 0.15
CLDND1-219ENST00000508659 DDX39BQ13838 428 aaKnown RBP15.97■□□□□ 0.15
CLDND1-219ENST00000508659 NSDHLQ15738 373 aa15.97■□□□□ 0.15
CLDND1-219ENST00000508659 NADK2Q4G0N4 442 aa15.97■□□□□ 0.15
CLDND1-219ENST00000508659 AGAP7PQ5VUJ5 663 aa15.97■□□□□ 0.15
CLDND1-219ENST00000508659 LIPJQ5W064 366 aa15.97■□□□□ 0.15
CLDND1-219ENST00000508659 CA13Q8N1Q1 262 aa15.97■□□□□ 0.15
CLDND1-219ENST00000508659 OR7G3Q8NG95 312 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms