RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 ABHD13Q7L211 337 aa16.62■□□□□ 0.25
RNF4-209ENST00000507784 ASCL5Q7RTU5 278 aa16.62■□□□□ 0.25
RNF4-209ENST00000507784 FAM9CQ8IZT9 166 aa16.62■□□□□ 0.25
RNF4-209ENST00000507784 D2HGDHQ8N465 521 aa16.62■□□□□ 0.25
RNF4-209ENST00000507784 OR9I1Q8NGQ6 314 aa16.62■□□□□ 0.25
RNF4-209ENST00000507784 UTP15Q8TED0 518 aaKnown RBP16.62■□□□□ 0.25
RNF4-209ENST00000507784 GFM2Q969S9 779 aaKnown RBP16.62■□□□□ 0.25
RNF4-209ENST00000507784 NSL1Q96IY1 281 aa16.62■□□□□ 0.25
RNF4-209ENST00000507784 FCRL1Q96LA6 429 aa16.62■□□□□ 0.25
RNF4-209ENST00000507784 TBCDQ9BTW9 1192 aa16.62■□□□□ 0.25
RNF4-209ENST00000507784 BRINP2Q9C0B6 783 aa16.62■□□□□ 0.25
RNF4-209ENST00000507784 CHRNA10Q9GZZ6 450 aa16.62■□□□□ 0.25
RNF4-209ENST00000507784 SPRTNQ9H040 489 aaPredicted RBP16.62■□□□□ 0.25
RNF4-209ENST00000507784 SIRT5Q9NXA8 310 aa16.62■□□□□ 0.25
RNF4-209ENST00000507784 CACNA1HO95180 2353 aa16.62■□□□□ 0.25
RNF4-209ENST00000507784 C4orf51C9J302 202 aa16.61■□□□□ 0.25
RNF4-209ENST00000507784 C9JVG2 144 aa16.61■□□□□ 0.25
RNF4-209ENST00000507784 D6RAR5 112 aa16.61■□□□□ 0.25
RNF4-209ENST00000507784 SLC22A2O15244 555 aa16.61■□□□□ 0.25
RNF4-209ENST00000507784 RFPL3O75679 317 aa16.61■□□□□ 0.25
RNF4-209ENST00000507784 ACPPP15309 386 aa16.61■□□□□ 0.25
RNF4-209ENST00000507784 TACR1P25103 407 aa16.61■□□□□ 0.25
RNF4-209ENST00000507784 E2F1Q01094 437 aa16.61■□□□□ 0.25
RNF4-209ENST00000507784 PTGR1Q14914 329 aa16.61■□□□□ 0.25
RNF4-209ENST00000507784 KRT72Q14CN4 511 aa16.61■□□□□ 0.25
RNF4-209ENST00000507784 NDUFA9Q16795 377 aa16.61■□□□□ 0.25
RNF4-209ENST00000507784 TCTE1Q5JU00 501 aa16.61■□□□□ 0.25
RNF4-209ENST00000507784 ARHGAP22Q7Z5H3 698 aa16.61■□□□□ 0.25
RNF4-209ENST00000507784 POU5F2Q8N7G0 328 aa16.61■□□□□ 0.25
RNF4-209ENST00000507784 AMER3Q8N944 861 aa16.61■□□□□ 0.25
RNF4-209ENST00000507784 TTC29Q8NA56 475 aaPredicted RBP16.61■□□□□ 0.25
RNF4-209ENST00000507784 OR8K5Q8NH50 307 aa16.61■□□□□ 0.25
RNF4-209ENST00000507784 C16orf78Q8WTQ4 265 aa16.61■□□□□ 0.25
RNF4-209ENST00000507784 KCNC2Q96PR1 638 aa16.61■□□□□ 0.25
RNF4-209ENST00000507784 FANCEQ9HB96 536 aa16.61■□□□□ 0.25
RNF4-209ENST00000507784 PRDM7Q9NQW5 492 aa16.61■□□□□ 0.25
RNF4-209ENST00000507784 SDR39U1Q9NRG7 319 aaPredicted RBP16.61■□□□□ 0.25
RNF4-209ENST00000507784 ZIM2Q9NZV7 527 aa16.61■□□□□ 0.25
RNF4-209ENST00000507784 PDP2Q9P2J9 529 aa16.61■□□□□ 0.25
RNF4-209ENST00000507784 MRPS2Q9Y399 296 aaKnown RBP16.61■□□□□ 0.25
RNF4-209ENST00000507784 CAPN14A8MX76 684 aa16.6■□□□□ 0.25
RNF4-209ENST00000507784 NR5A2O00482 541 aa16.6■□□□□ 0.25
RNF4-209ENST00000507784 OR2B3O76000 313 aa16.6■□□□□ 0.25
RNF4-209ENST00000507784 KIAA0754O94854 1291 aa16.6■□□□□ 0.25
RNF4-209ENST00000507784 ANKRD34CP0C6C1 535 aa16.6■□□□□ 0.25
RNF4-209ENST00000507784 ESRRAP11474 423 aaPredicted RBP16.6■□□□□ 0.25
RNF4-209ENST00000507784 COX4I1P13073 169 aa16.6■□□□□ 0.25
RNF4-209ENST00000507784 ALOX12P18054 663 aa16.6■□□□□ 0.25
RNF4-209ENST00000507784 TPP2P29144 1249 aaPredicted RBP16.6■□□□□ 0.25
RNF4-209ENST00000507784 ASMTP46597 345 aa16.6■□□□□ 0.25
RNF4-209ENST00000507784 MAPK12P53778 367 aa16.6■□□□□ 0.25
RNF4-209ENST00000507784 CLDN8P56748 225 aa16.6■□□□□ 0.25
RNF4-209ENST00000507784 KCNK10P57789 538 aa16.6■□□□□ 0.25
RNF4-209ENST00000507784 FOXM1Q08050 763 aa16.6■□□□□ 0.25
RNF4-209ENST00000507784 C2orf80Q0P641 193 aa16.6■□□□□ 0.25
RNF4-209ENST00000507784 SLAMF1Q13291 335 aa16.6■□□□□ 0.25
RNF4-209ENST00000507784 MAPRE2Q15555 327 aa16.6■□□□□ 0.25
RNF4-209ENST00000507784 TRIP6Q15654 476 aaKnown RBP16.6■□□□□ 0.25
RNF4-209ENST00000507784 FAM91A1Q658Y4 838 aa16.6■□□□□ 0.25
RNF4-209ENST00000507784 GALNT18Q6P9A2 607 aa16.6■□□□□ 0.25
RNF4-209ENST00000507784 SNX32Q86XE0 403 aa16.6■□□□□ 0.25
RNF4-209ENST00000507784 DEFB124Q8NES8 71 aa16.6■□□□□ 0.25
RNF4-209ENST00000507784 EGLN2Q96KS0 407 aa16.6■□□□□ 0.25
RNF4-209ENST00000507784 TEFMQ96QE5 360 aaKnown RBP16.6■□□□□ 0.25
RNF4-209ENST00000507784 TUBB6Q9BUF5 446 aa16.6■□□□□ 0.25
RNF4-209ENST00000507784 ZNF717Q9BY31 904 aaPredicted RBP16.6■□□□□ 0.25
RNF4-209ENST00000507784 ROGDIQ9GZN7 287 aa16.6■□□□□ 0.25
RNF4-209ENST00000507784 DDX31Q9H8H2 851 aaKnown RBP16.6■□□□□ 0.25
RNF4-209ENST00000507784 LHX9Q9NQ69 397 aa16.6■□□□□ 0.25
RNF4-209ENST00000507784 TAGLN3Q9UI15 199 aa16.6■□□□□ 0.25
RNF4-209ENST00000507784 SERTAD3Q9UJW9 196 aa16.6■□□□□ 0.25
RNF4-209ENST00000507784 ADAM29Q9UKF5 820 aa16.6■□□□□ 0.25
RNF4-209ENST00000507784 ADAMTS20P59510 1910 aa16.59■□□□□ 0.25
RNF4-209ENST00000507784 A0A088AWK7 358 aa16.59■□□□□ 0.25
RNF4-209ENST00000507784 HYKKA2RU49 373 aa16.59■□□□□ 0.25
RNF4-209ENST00000507784 CBX6O95503 412 aa16.59■□□□□ 0.25
RNF4-209ENST00000507784 SNRPB2P08579 225 aaKnown RBP16.59■□□□□ 0.25
RNF4-209ENST00000507784 SMIM10L1P0DMW3 83 aa16.59■□□□□ 0.25
RNF4-209ENST00000507784 CD1EP15812 388 aa16.59■□□□□ 0.25
RNF4-209ENST00000507784 IL1RNP18510 177 aa16.59■□□□□ 0.25
RNF4-209ENST00000507784 ZNF10P21506 573 aaPredicted RBP16.59■□□□□ 0.25
RNF4-209ENST00000507784 HIST1H1TP22492 207 aaPredicted RBP16.59■□□□□ 0.25
RNF4-209ENST00000507784 ATP5A1P25705 553 aaKnown RBP16.59■□□□□ 0.25
RNF4-209ENST00000507784 CERS1P27544 350 aa16.59■□□□□ 0.25
RNF4-209ENST00000507784 CSTF2P33240 577 aaKnown RBP eCLIP16.59■□□□□ 0.25
RNF4-209ENST00000507784 CPA2P48052 419 aa16.59■□□□□ 0.25
RNF4-209ENST00000507784 POLR2JP52435 117 aaKnown RBP16.59■□□□□ 0.25
RNF4-209ENST00000507784 ARFIP1P53367 373 aa16.59■□□□□ 0.25
RNF4-209ENST00000507784 MTTPP55157 894 aa16.59■□□□□ 0.25
RNF4-209ENST00000507784 TAS2R50P59544 299 aa16.59■□□□□ 0.25
RNF4-209ENST00000507784 NHLH1Q02575 133 aa16.59■□□□□ 0.25
RNF4-209ENST00000507784 ACY1Q03154 408 aa16.59■□□□□ 0.25
RNF4-209ENST00000507784 ZNF763Q0D2J5 394 aa16.59■□□□□ 0.25
RNF4-209ENST00000507784 ILKQ13418 452 aa16.59■□□□□ 0.25
RNF4-209ENST00000507784 CYLC2Q14093 348 aaPredicted RBP16.59■□□□□ 0.25
RNF4-209ENST00000507784 GRM7Q14831 915 aa16.59■□□□□ 0.25
RNF4-209ENST00000507784 SLC9A5Q14940 896 aa16.59■□□□□ 0.25
RNF4-209ENST00000507784 PRTGQ2VWP7 1150 aa16.59■□□□□ 0.25
RNF4-209ENST00000507784 DEFB134Q4QY38 66 aa16.59■□□□□ 0.25
RNF4-209ENST00000507784 TMEM214Q6NUQ4 689 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms