RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 PLEKHN1Q494U1 663 aaPredicted RBP14.49□□□□□ -0.09
NUP50-219ENST00000497960 CDKL4Q5MAI5 379 aa14.49□□□□□ -0.09
NUP50-219ENST00000497960 SULT1C3Q6IMI6 304 aa14.49□□□□□ -0.09
NUP50-219ENST00000497960 ISLR2Q6UXK2 745 aa14.49□□□□□ -0.09
NUP50-219ENST00000497960 ABHD13Q7L211 337 aa14.49□□□□□ -0.09
NUP50-219ENST00000497960 SRRM1Q8IYB3 904 aaKnown RBP14.49□□□□□ -0.09
NUP50-219ENST00000497960 IQCKQ8N0W5 287 aa14.49□□□□□ -0.09
NUP50-219ENST00000497960 C4orf33Q8N1A6 199 aa14.49□□□□□ -0.09
NUP50-219ENST00000497960 Q8NA96 180 aa14.49□□□□□ -0.09
NUP50-219ENST00000497960 TRPV3Q8NET8 790 aa14.49□□□□□ -0.09
NUP50-219ENST00000497960 NT5CQ8TCD5 201 aa14.49□□□□□ -0.09
NUP50-219ENST00000497960 ZBTB9Q96C00 473 aa14.49□□□□□ -0.09
NUP50-219ENST00000497960 WDR77Q9BQA1 342 aaPredicted RBP14.49□□□□□ -0.09
NUP50-219ENST00000497960 CAPS2Q9BXY5 557 aa14.49□□□□□ -0.09
NUP50-219ENST00000497960 VN1R1Q9GZP7 353 aa14.49□□□□□ -0.09
NUP50-219ENST00000497960 SPNS1Q9H2V7 528 aa14.49□□□□□ -0.09
NUP50-219ENST00000497960 ZNF358Q9NW07 568 aa14.49□□□□□ -0.09
NUP50-219ENST00000497960 NUDT4Q9NZJ9 180 aa14.49□□□□□ -0.09
NUP50-219ENST00000497960 XPR1Q9UBH6 696 aa14.49□□□□□ -0.09
NUP50-219ENST00000497960 C19orf25Q9UFG5 118 aaPredicted RBP14.49□□□□□ -0.09
NUP50-219ENST00000497960 CCDC189A1A4V9 331 aa14.48□□□□□ -0.09
NUP50-219ENST00000497960 UBXN8O00124 270 aa14.48□□□□□ -0.09
NUP50-219ENST00000497960 JRKO75564 520 aa14.48□□□□□ -0.09
NUP50-219ENST00000497960 SERPINA7P05543 415 aa14.48□□□□□ -0.09
NUP50-219ENST00000497960 RBP1P09455 135 aa14.48□□□□□ -0.09
NUP50-219ENST00000497960 MYZAPP0CAP1 466 aa14.48□□□□□ -0.09
NUP50-219ENST00000497960 C1GALT1C1LP0DN25 315 aa14.48□□□□□ -0.09
NUP50-219ENST00000497960 ICAM2P13598 275 aa14.48□□□□□ -0.09
NUP50-219ENST00000497960 GDF5P43026 501 aa14.48□□□□□ -0.09
NUP50-219ENST00000497960 SLC6A12P48065 614 aa14.48□□□□□ -0.09
NUP50-219ENST00000497960 C18orf21Q32NC0 220 aaPredicted RBP14.48□□□□□ -0.09
NUP50-219ENST00000497960 TMEM205Q6UW68 189 aa14.48□□□□□ -0.09
NUP50-219ENST00000497960 RIPOR1Q6ZS17 1223 aa14.48□□□□□ -0.09
NUP50-219ENST00000497960 ISCA2Q86U28 154 aa14.48□□□□□ -0.09
NUP50-219ENST00000497960 TRABD2AQ86V40 505 aa14.48□□□□□ -0.09
NUP50-219ENST00000497960 LCA5Q86VQ0 697 aa14.48□□□□□ -0.09
NUP50-219ENST00000497960 PDSS2Q86YH6 399 aa14.48□□□□□ -0.09
NUP50-219ENST00000497960 KLHDC8AQ8IYD2 350 aa14.48□□□□□ -0.09
NUP50-219ENST00000497960 AFAP1L2Q8N4X5 818 aa14.48□□□□□ -0.09
NUP50-219ENST00000497960 GALNT11Q8NCW6 608 aa14.48□□□□□ -0.09
NUP50-219ENST00000497960 RHEBL1Q8TAI7 183 aa14.48□□□□□ -0.09
NUP50-219ENST00000497960 PPP4R1Q8TF05 950 aa14.48□□□□□ -0.09
NUP50-219ENST00000497960 MOCOSQ96EN8 888 aa14.48□□□□□ -0.09
NUP50-219ENST00000497960 LMF1Q96S06 567 aa14.48□□□□□ -0.09
NUP50-219ENST00000497960 ATOH8Q96SQ7 321 aa14.48□□□□□ -0.09
NUP50-219ENST00000497960 SLC29A3Q9BZD2 475 aa14.48□□□□□ -0.09
NUP50-219ENST00000497960 ZNF700Q9H0M5 742 aa14.48□□□□□ -0.09
NUP50-219ENST00000497960 ZBTB20Q9HC78 741 aaPredicted RBP14.48□□□□□ -0.09
NUP50-219ENST00000497960 GPRC5BQ9NZH0 403 aa14.48□□□□□ -0.09
NUP50-219ENST00000497960 CPSF2Q9P2I0 782 aaKnown RBP14.48□□□□□ -0.09
NUP50-219ENST00000497960 ESPL1Q14674 2120 aa14.48□□□□□ -0.09
NUP50-219ENST00000497960 ZNF860A6NHJ4 632 aa14.47□□□□□ -0.09
NUP50-219ENST00000497960 COPEO14579 308 aa14.47□□□□□ -0.09
NUP50-219ENST00000497960 GALR3O60755 368 aaPredicted RBP14.47□□□□□ -0.09
NUP50-219ENST00000497960 WFS1O76024 890 aa14.47□□□□□ -0.09
NUP50-219ENST00000497960 GSTA1P08263 222 aa14.47□□□□□ -0.09
NUP50-219ENST00000497960 PRR35P0CG20 571 aa14.47□□□□□ -0.09
NUP50-219ENST00000497960 ZNF888P0CJ79 500 aaPredicted RBP14.47□□□□□ -0.09
NUP50-219ENST00000497960 GFAPP14136 432 aa14.47□□□□□ -0.09
NUP50-219ENST00000497960 KRT4P19013 534 aa14.47□□□□□ -0.09
NUP50-219ENST00000497960 CDC16Q13042 620 aa14.47□□□□□ -0.09
NUP50-219ENST00000497960 DEFB134Q4QY38 66 aa14.47□□□□□ -0.09
NUP50-219ENST00000497960 CRB2Q5IJ48 1285 aa14.47□□□□□ -0.09
NUP50-219ENST00000497960 IGFL2Q6UWQ7 119 aa14.47□□□□□ -0.09
NUP50-219ENST00000497960 SLCO4C1Q6ZQN7 724 aa14.47□□□□□ -0.09
NUP50-219ENST00000497960 LINC00696Q6ZRV3 163 aa14.47□□□□□ -0.09
NUP50-219ENST00000497960 Q6ZS92 163 aa14.47□□□□□ -0.09
NUP50-219ENST00000497960 HDXQ7Z353 690 aa14.47□□□□□ -0.09
NUP50-219ENST00000497960 CPEB2Q7Z5Q1 589 aaKnown RBP14.47□□□□□ -0.09
NUP50-219ENST00000497960 KRT78Q8N1N4 520 aa14.47□□□□□ -0.09
NUP50-219ENST00000497960 ANKRD53Q8N9V6 530 aa14.47□□□□□ -0.09
NUP50-219ENST00000497960 PDPRQ8NCN5 879 aa14.47□□□□□ -0.09
NUP50-219ENST00000497960 TTLQ8NG68 377 aa14.47□□□□□ -0.09
NUP50-219ENST00000497960 DNAJB14Q8TBM8 379 aa14.47□□□□□ -0.09
NUP50-219ENST00000497960 PEX11GQ96HA9 241 aa14.47□□□□□ -0.09
NUP50-219ENST00000497960 APOPT1Q96IL0 206 aa14.47□□□□□ -0.09
NUP50-219ENST00000497960 GPR78Q96P69 363 aa14.47□□□□□ -0.09
NUP50-219ENST00000497960 OR1F2PQ96R84 312 aa14.47□□□□□ -0.09
NUP50-219ENST00000497960 SMC6Q96SB8 1091 aa14.47□□□□□ -0.09
NUP50-219ENST00000497960 TUBB6Q9BUF5 446 aa14.47□□□□□ -0.09
NUP50-219ENST00000497960 IQCGQ9H095 443 aaKnown RBP14.47□□□□□ -0.09
NUP50-219ENST00000497960 STMN4Q9H169 189 aaPredicted RBP14.47□□□□□ -0.09
NUP50-219ENST00000497960 MRPL46Q9H2W6 279 aaKnown RBP14.47□□□□□ -0.09
NUP50-219ENST00000497960 DNAJC11Q9NVH1 559 aa14.47□□□□□ -0.09
NUP50-219ENST00000497960 TENM4Q6N022 2769 aa14.47□□□□□ -0.09
NUP50-219ENST00000497960 CLGNO14967 610 aa14.46□□□□□ -0.09
NUP50-219ENST00000497960 TAPBPO15533 448 aa14.46□□□□□ -0.09
NUP50-219ENST00000497960 SMIM24O75264 130 aa14.46□□□□□ -0.09
NUP50-219ENST00000497960 STK16O75716 305 aa14.46□□□□□ -0.09
NUP50-219ENST00000497960 SERPINA6P08185 405 aa14.46□□□□□ -0.09
NUP50-219ENST00000497960 GGT5P36269 586 aa14.46□□□□□ -0.09
NUP50-219ENST00000497960 HNF4AP41235 474 aa14.46□□□□□ -0.09
NUP50-219ENST00000497960 HSPA7P48741 367 aa14.46□□□□□ -0.09
NUP50-219ENST00000497960 AGTR2P50052 363 aa14.46□□□□□ -0.09
NUP50-219ENST00000497960 MFAP5Q13361 173 aa14.46□□□□□ -0.09
NUP50-219ENST00000497960 SLBPQ14493 270 aaKnown RBP eCLIP14.46□□□□□ -0.09
NUP50-219ENST00000497960 PCOLCEQ15113 449 aa14.46□□□□□ -0.09
NUP50-219ENST00000497960 PRR30Q53SZ7 412 aaPredicted RBP14.46□□□□□ -0.09
NUP50-219ENST00000497960 TMIGD1Q6UXZ0 262 aa14.46□□□□□ -0.09
NUP50-219ENST00000497960 CISD2Q8N5K1 135 aaKnown RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms