RNA–Protein interactions for RNA: ENST00000496296.5

FGFR1-223, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-223ENST00000496296 THEGLP0DJG4 465 aa20.28■□□□□ 0.84
FGFR1-223ENST00000496296 NDUFS1P28331 727 aa20.28■□□□□ 0.84
FGFR1-223ENST00000496296 PXNP49023 591 aaPredicted RBP20.28■□□□□ 0.84
FGFR1-223ENST00000496296 RAB28P51157 221 aa20.28■□□□□ 0.84
FGFR1-223ENST00000496296 ILF3Q12906 894 aaKnown RBP eCLIP20.28■□□□□ 0.842e-9■□□□□ 10.1
FGFR1-223ENST00000496296 CATSPEREQ5SY80 951 aa20.28■□□□□ 0.84
FGFR1-223ENST00000496296 OR4F3Q6IEY1 312 aa20.28■□□□□ 0.84
FGFR1-223ENST00000496296 TTC33Q6PID6 262 aaPredicted RBP20.28■□□□□ 0.84
FGFR1-223ENST00000496296 PHACTR4Q8IZ21 702 aa20.28■□□□□ 0.84
FGFR1-223ENST00000496296 MAGEE2Q8TD90 523 aaPredicted RBP20.28■□□□□ 0.84
FGFR1-223ENST00000496296 UBE2E3Q969T4 207 aa20.28■□□□□ 0.84
FGFR1-223ENST00000496296 PHF12Q96QT6 1004 aa20.28■□□□□ 0.84
FGFR1-223ENST00000496296 MENTQ9BUN1 341 aa20.28■□□□□ 0.84
FGFR1-223ENST00000496296 TMEM168Q9H0V1 697 aa20.28■□□□□ 0.84
FGFR1-223ENST00000496296 AASDHPPTQ9NRN7 309 aa20.28■□□□□ 0.84
FGFR1-223ENST00000496296 TBC1D29Q9UFV1 150 aa20.28■□□□□ 0.84
FGFR1-223ENST00000496296 PCOLCE2Q9UKZ9 415 aa20.28■□□□□ 0.84
FGFR1-223ENST00000496296 V9GYQ6 96 aa20.28■□□□□ 0.84
FGFR1-223ENST00000496296 TNFRSF10AO00220 468 aa20.27■□□□□ 0.84
FGFR1-223ENST00000496296 MYO1DO94832 1006 aa20.27■□□□□ 0.84
FGFR1-223ENST00000496296 PCNAP12004 261 aa20.27■□□□□ 0.84
FGFR1-223ENST00000496296 GPX2P18283 190 aa20.27■□□□□ 0.84
FGFR1-223ENST00000496296 AK4P27144 223 aaPredicted RBP20.27■□□□□ 0.84
FGFR1-223ENST00000496296 ACSM2AQ08AH3 577 aa20.27■□□□□ 0.84
FGFR1-223ENST00000496296 SLBPQ14493 270 aaKnown RBP eCLIP20.27■□□□□ 0.84
FGFR1-223ENST00000496296 C11orf91Q3C1V1 193 aa20.27■□□□□ 0.84
FGFR1-223ENST00000496296 SPIN4Q56A73 249 aa20.27■□□□□ 0.84
FGFR1-223ENST00000496296 ACSM2BQ68CK6 577 aa20.27■□□□□ 0.84
FGFR1-223ENST00000496296 C17orf64Q86WR6 236 aa20.27■□□□□ 0.84
FGFR1-223ENST00000496296 C10orf111Q8N326 155 aa20.27■□□□□ 0.84
FGFR1-223ENST00000496296 TRIML2Q8N7C3 387 aa20.27■□□□□ 0.84
FGFR1-223ENST00000496296 LMNTD1Q8N9Z9 388 aa20.27■□□□□ 0.84
FGFR1-223ENST00000496296 CADM4Q8NFZ8 388 aa20.27■□□□□ 0.84
FGFR1-223ENST00000496296 OR7G3Q8NG95 312 aa20.27■□□□□ 0.84
FGFR1-223ENST00000496296 FBXO30Q8TB52 745 aa20.27■□□□□ 0.84
FGFR1-223ENST00000496296 CYGBQ8WWM9 190 aa20.27■□□□□ 0.84
FGFR1-223ENST00000496296 KLHDC7BQ96G42 594 aa20.27■□□□□ 0.84
FGFR1-223ENST00000496296 TBCDQ9BTW9 1192 aa20.27■□□□□ 0.84
FGFR1-223ENST00000496296 REXO4Q9GZR2 422 aaKnown RBP20.27■□□□□ 0.84
FGFR1-223ENST00000496296 TSC22D4Q9Y3Q8 395 aa20.27■□□□□ 0.84
FGFR1-223ENST00000496296 CEPT1Q9Y6K0 416 aa20.27■□□□□ 0.84
FGFR1-223ENST00000496296 METTL12A8MUP2 240 aa20.26■□□□□ 0.83
FGFR1-223ENST00000496296 PRKD3O94806 890 aa20.26■□□□□ 0.83
FGFR1-223ENST00000496296 SNAP29O95721 258 aa20.26■□□□□ 0.83
FGFR1-223ENST00000496296 MAGEA2P43356 314 aa20.26■□□□□ 0.83
FGFR1-223ENST00000496296 CXCL12P48061 93 aa20.26■□□□□ 0.83
FGFR1-223ENST00000496296 RAE1P78406 368 aaKnown RBP20.26■□□□□ 0.83
FGFR1-223ENST00000496296 EPS8Q12929 822 aa20.26■□□□□ 0.83
FGFR1-223ENST00000496296 DDX39BQ13838 428 aaKnown RBP20.26■□□□□ 0.83
FGFR1-223ENST00000496296 RBBP5Q15291 538 aaKnown RBP20.26■□□□□ 0.83
FGFR1-223ENST00000496296 ERICH5Q6P6B1 374 aa20.26■□□□□ 0.83
FGFR1-223ENST00000496296 GALNT18Q6P9A2 607 aa20.26■□□□□ 0.83
FGFR1-223ENST00000496296 SLC22A18ASQ8N1D0 253 aa20.26■□□□□ 0.83
FGFR1-223ENST00000496296 KRT78Q8N1N4 520 aa20.26■□□□□ 0.83
FGFR1-223ENST00000496296 RNF175Q8N4F7 328 aa20.26■□□□□ 0.83
FGFR1-223ENST00000496296 SPACA7Q96KW9 195 aa20.26■□□□□ 0.83
FGFR1-223ENST00000496296 MTERF1Q99551 399 aaKnown RBP20.26■□□□□ 0.83
FGFR1-223ENST00000496296 IER2Q9BTL4 223 aa20.26■□□□□ 0.83
FGFR1-223ENST00000496296 SPATA9Q9BWV2 254 aa20.26■□□□□ 0.83
FGFR1-223ENST00000496296 TAC3Q9UHF0 121 aa20.26■□□□□ 0.83
FGFR1-223ENST00000496296 BTNL2Q9UIR0 455 aa20.26■□□□□ 0.83
FGFR1-223ENST00000496296 SPTY2D1-AS1A0A0U1RR47 76 aa20.26■□□□□ 0.83
FGFR1-223ENST00000496296 EVPLLA8MZ36 301 aa20.26■□□□□ 0.83
FGFR1-223ENST00000496296 FOXE1O00358 373 aaPredicted RBP20.26■□□□□ 0.83
FGFR1-223ENST00000496296 CCNDBP1O95273 360 aa20.26■□□□□ 0.83
FGFR1-223ENST00000496296 PHEXP78562 749 aa20.26■□□□□ 0.83
FGFR1-223ENST00000496296 LRRC74AQ0VAA2 488 aa20.26■□□□□ 0.83
FGFR1-223ENST00000496296 CPZQ66K79 652 aa20.26■□□□□ 0.83
FGFR1-223ENST00000496296 TMEM214Q6NUQ4 689 aaKnown RBP20.26■□□□□ 0.83
FGFR1-223ENST00000496296 B3GNT6Q6ZMB0 384 aa20.26■□□□□ 0.83
FGFR1-223ENST00000496296 ZNF551Q7Z340 670 aaPredicted RBP20.26■□□□□ 0.83
FGFR1-223ENST00000496296 ANKRD46Q86W74 232 aa20.26■□□□□ 0.83
FGFR1-223ENST00000496296 DCP2Q8IU60 420 aaKnown RBP20.26■□□□□ 0.83
FGFR1-223ENST00000496296 ZDHHC13Q8IUH4 622 aa20.26■□□□□ 0.83
FGFR1-223ENST00000496296 LAS2Q8IYD9 372 aa20.26■□□□□ 0.83
FGFR1-223ENST00000496296 ZCCHC7Q8N3Z6 543 aaKnown RBP20.26■□□□□ 0.83
FGFR1-223ENST00000496296 OR52E1Q8NGJ3 308 aa20.26■□□□□ 0.83
FGFR1-223ENST00000496296 OR2L8Q8NGY9 312 aa20.26■□□□□ 0.83
FGFR1-223ENST00000496296 CXorf40BQ96DE9 158 aa20.26■□□□□ 0.83
FGFR1-223ENST00000496296 AURKBQ96GD4 344 aaPredicted RBP20.26■□□□□ 0.83
FGFR1-223ENST00000496296 FBXL20Q96IG2 436 aa20.26■□□□□ 0.83
FGFR1-223ENST00000496296 ACAT2Q9BWD1 397 aa20.26■□□□□ 0.83
FGFR1-223ENST00000496296 EBPLQ9BY08 206 aa20.26■□□□□ 0.83
FGFR1-223ENST00000496296 GSDMCQ9BYG8 508 aa20.26■□□□□ 0.83
FGFR1-223ENST00000496296 SCHIP1Q9P0W5 487 aaPredicted RBP20.26■□□□□ 0.83
FGFR1-223ENST00000496296 SH2B3Q9UQQ2 575 aa20.26■□□□□ 0.83
FGFR1-223ENST00000496296 AP1M2Q9Y6Q5 423 aa20.26■□□□□ 0.83
FGFR1-223ENST00000496296 PIPSLA2A3N6 862 aa20.25■□□□□ 0.83
FGFR1-223ENST00000496296 SCAMP2O15127 329 aaKnown RBP20.25■□□□□ 0.83
FGFR1-223ENST00000496296 LRATO95237 230 aa20.25■□□□□ 0.83
FGFR1-223ENST00000496296 ALBP02768 609 aa20.25■□□□□ 0.83
FGFR1-223ENST00000496296 THRBP10828 461 aa20.25■□□□□ 0.83
FGFR1-223ENST00000496296 CXCR2P25025 360 aa20.25■□□□□ 0.83
FGFR1-223ENST00000496296 CD27P26842 260 aa20.25■□□□□ 0.83
FGFR1-223ENST00000496296 PKLRP30613 574 aa20.25■□□□□ 0.83
FGFR1-223ENST00000496296 TCEA2Q15560 299 aa20.25■□□□□ 0.83
FGFR1-223ENST00000496296 OR7A2PQ8NGA2 310 aa20.25■□□□□ 0.83
FGFR1-223ENST00000496296 CCL4L1Q8NHW4 92 aa20.25■□□□□ 0.83
FGFR1-223ENST00000496296 NETO1Q8TDF5 533 aa20.25■□□□□ 0.83
FGFR1-223ENST00000496296 PYURFQ96I23 114 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms