RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 GGTA1PQ4G0N0 100 aa7.45□□□□□ -1.22
SNX13-208ENST00000482558 KHDC1LQ5JSQ8 128 aa7.45□□□□□ -1.22
SNX13-208ENST00000482558 C6orf136Q5SQH8 315 aa7.45□□□□□ -1.22
SNX13-208ENST00000482558 CATSPEREQ5SY80 951 aa7.45□□□□□ -1.22
SNX13-208ENST00000482558 ATPAF1Q5TC12 328 aaPredicted RBP7.45□□□□□ -1.22
SNX13-208ENST00000482558 IL23RQ5VWK5 629 aa7.45□□□□□ -1.22
SNX13-208ENST00000482558 OR52E8Q6IFG1 317 aa7.45□□□□□ -1.22
SNX13-208ENST00000482558 FAM151BQ6UXP7 276 aa7.45□□□□□ -1.22
SNX13-208ENST00000482558 MSANTD1Q6ZTZ1 278 aa7.45□□□□□ -1.22
SNX13-208ENST00000482558 LRRC70Q7Z2Q7 622 aa7.45□□□□□ -1.22
SNX13-208ENST00000482558 GOLGA7Q7Z5G4 137 aa7.45□□□□□ -1.22
SNX13-208ENST00000482558 ZFAND4Q86XD8 727 aa7.45□□□□□ -1.22
SNX13-208ENST00000482558 SLC44A2Q8IWA5 706 aaPredicted RBP7.45□□□□□ -1.22
SNX13-208ENST00000482558 KBTBD2Q8IY47 623 aa7.45□□□□□ -1.22
SNX13-208ENST00000482558 CMTM8Q8IZV2 173 aa7.45□□□□□ -1.22
SNX13-208ENST00000482558 APCDD1Q8J025 514 aa7.45□□□□□ -1.22
SNX13-208ENST00000482558 ANKFN1Q8N957 763 aa7.45□□□□□ -1.22
SNX13-208ENST00000482558 FNDC5Q8NAU1 212 aa7.45□□□□□ -1.22
SNX13-208ENST00000482558 OR8J3Q8NGG0 315 aa7.45□□□□□ -1.22
SNX13-208ENST00000482558 PHOSPHO2Q8TCD6 241 aa7.45□□□□□ -1.22
SNX13-208ENST00000482558 UTP15Q8TED0 518 aaKnown RBP7.45□□□□□ -1.22
SNX13-208ENST00000482558 WFIKKN2Q8TEU8 576 aa7.45□□□□□ -1.22
SNX13-208ENST00000482558 WBP2Q969T9 261 aa7.45□□□□□ -1.22
SNX13-208ENST00000482558 DACT3Q96B18 629 aaPredicted RBP7.45□□□□□ -1.22
SNX13-208ENST00000482558 LRRC46Q96FV0 321 aa7.45□□□□□ -1.22
SNX13-208ENST00000482558 DCUN1D1Q96GG9 259 aa7.45□□□□□ -1.22
SNX13-208ENST00000482558 MRGPRX1Q96LB2 322 aa7.45□□□□□ -1.22
SNX13-208ENST00000482558 SAMD11Q96NU1 681 aa7.45□□□□□ -1.22
SNX13-208ENST00000482558 SLC22A12Q96S37 553 aa7.45□□□□□ -1.22
SNX13-208ENST00000482558 EGFL8Q99944 293 aa7.45□□□□□ -1.22
SNX13-208ENST00000482558 TM6SF2Q9BZW4 377 aa7.45□□□□□ -1.22
SNX13-208ENST00000482558 TWSG1Q9GZX9 223 aa7.45□□□□□ -1.22
SNX13-208ENST00000482558 TUBB1Q9H4B7 451 aa7.45□□□□□ -1.22
SNX13-208ENST00000482558 NOL11Q9H8H0 719 aaKnown RBP7.45□□□□□ -1.22
SNX13-208ENST00000482558 WWOXQ9NZC7 414 aa7.45□□□□□ -1.22
SNX13-208ENST00000482558 THEGQ9P2T0 379 aa7.45□□□□□ -1.22
SNX13-208ENST00000482558 GALPQ9UBC7 116 aa7.45□□□□□ -1.22
SNX13-208ENST00000482558 DKK3Q9UBP4 350 aa7.45□□□□□ -1.22
SNX13-208ENST00000482558 MAGEL2Q9UJ55 1249 aa7.45□□□□□ -1.22
SNX13-208ENST00000482558 ACSL6Q9UKU0 697 aa7.45□□□□□ -1.22
SNX13-208ENST00000482558 TMED5Q9Y3A6 229 aa7.45□□□□□ -1.22
SNX13-208ENST00000482558 ZNF106Q9H2Y7 1883 aaKnown RBP7.45□□□□□ -1.22
SNX13-208ENST00000482558 DENND4CQ5VZ89 1909 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 TSPAN11A1L157 253 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 DPPA5A6NC42 116 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 TRIM43BA6NCK2 446 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 OR14I1A6ND48 311 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 OTOL1A6NHN0 477 aaPredicted RBP7.44□□□□□ -1.22
SNX13-208ENST00000482558 NCF1BA6NI72 391 aaPredicted RBP7.44□□□□□ -1.22
SNX13-208ENST00000482558 NOTOA8MTQ0 251 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 NCF1CA8MVU1 366 aaPredicted RBP7.44□□□□□ -1.22
SNX13-208ENST00000482558 FAM171A2A8MVW0 826 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 PSMD11O00231 422 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 GAPDHSO14556 408 aaPredicted RBP7.44□□□□□ -1.22
SNX13-208ENST00000482558 SMAD6O43541 496 aaKnown RBP7.44□□□□□ -1.22
SNX13-208ENST00000482558 PSPNO60542 156 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 UGDHO60701 494 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 TULP3O75386 442 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 ZNF821O75541 412 aaPredicted RBP7.44□□□□□ -1.22
SNX13-208ENST00000482558 OR4F21O95013 312 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 TRIM16O95361 564 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 CLDN7O95471 211 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 FGBP02675 491 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 FTH1P02794 183 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 CAPN1P07384 714 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 SRPRAP08240 638 aaKnown RBP7.44□□□□□ -1.22
SNX13-208ENST00000482558 ALPIP09923 528 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 MSL3P1P0C860 447 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 PRSS56P0CW18 603 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 PRPS2P11908 318 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 NCF1P14598 390 aaPredicted RBP7.44□□□□□ -1.22
SNX13-208ENST00000482558 CSF2RAP15509 400 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 TSPAN8P19075 237 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 POLR2EP19388 210 aaKnown RBP7.44□□□□□ -1.22
SNX13-208ENST00000482558 CYP2A7P20853 494 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 PRPH2P23942 346 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 SLC6A2P23975 617 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 FASP25445 335 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 AKT1P31749 480 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 CD70P32970 193 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 CA8P35219 290 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 GNPDA1P46926 289 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 PNLIPRP1P54315 467 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 AQP4P55087 323 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 FOXA1P55317 472 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 DEFB103AP81534 67 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 CYP4F8P98187 520 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 MVKQ03426 396 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 GRB7Q14451 532 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 PUM1Q14671 1186 aaKnown RBP eCLIP7.44□□□□□ -1.22
SNX13-208ENST00000482558 KIR3DS1Q14943 382 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 PPA1Q15181 289 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 GPR68Q15743 365 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 CHRNA6Q15825 494 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 VPS26BQ4G0F5 336 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 SFT2D3Q587I9 215 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 LPCAT4Q643R3 524 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 BICRALQ6AI39 1079 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 RAB12Q6IQ22 244 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 CRTC1Q6UUV9 634 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms