RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 TAB2Q9NYJ8 693 aa10.91□□□□□ -0.66
USP11-208ENST00000480104 ATG4BQ9Y4P1 393 aa10.91□□□□□ -0.66
USP11-208ENST00000480104 PLAUP00749 431 aa10.9□□□□□ -0.66
USP11-208ENST00000480104 FHP07954 510 aa10.9□□□□□ -0.66
USP11-208ENST00000480104 CCL3P10147 92 aa10.9□□□□□ -0.66
USP11-208ENST00000480104 PKMP14618 531 aaKnown RBP10.9□□□□□ -0.66
USP11-208ENST00000480104 CDKN1AP38936 164 aa10.9□□□□□ -0.66
USP11-208ENST00000480104 ARHGAP25P42331 645 aa10.9□□□□□ -0.66
USP11-208ENST00000480104 NPNTQ6UXI9 565 aa10.9□□□□□ -0.66
USP11-208ENST00000480104 ZNF550Q7Z398 422 aa10.9□□□□□ -0.66
USP11-208ENST00000480104 RAB42Q8N4Z0 105 aa10.9□□□□□ -0.66
USP11-208ENST00000480104 OR5T3Q8NGG3 340 aa10.9□□□□□ -0.66
USP11-208ENST00000480104 OR6P1Q8NGX9 317 aa10.9□□□□□ -0.66
USP11-208ENST00000480104 SREK1Q8WXA9 508 aaKnown RBP10.9□□□□□ -0.66
USP11-208ENST00000480104 ANKRD9Q96BM1 317 aaPredicted RBP10.9□□□□□ -0.66
USP11-208ENST00000480104 DNAJC1Q96KC8 554 aaKnown RBP10.9□□□□□ -0.66
USP11-208ENST00000480104 SCYL1Q96KG9 808 aa10.9□□□□□ -0.66
USP11-208ENST00000480104 TIMP4Q99727 224 aa10.9□□□□□ -0.66
USP11-208ENST00000480104 PRDM14Q9GZV8 571 aa10.9□□□□□ -0.66
USP11-208ENST00000480104 ANKHQ9HCJ1 492 aa10.9□□□□□ -0.66
USP11-208ENST00000480104 MRPL47Q9HD33 250 aaKnown RBP10.9□□□□□ -0.66
USP11-208ENST00000480104 SACM1LQ9NTJ5 587 aa10.9□□□□□ -0.66
USP11-208ENST00000480104 CAMK2AQ9UQM7 478 aa10.9□□□□□ -0.66
USP11-208ENST00000480104 GOLGA6L4A6NEF3 574 aa10.89□□□□□ -0.67
USP11-208ENST00000480104 A8MXE2 369 aa10.89□□□□□ -0.67
USP11-208ENST00000480104 PPP1R12AO14974 1030 aaPredicted RBP10.89□□□□□ -0.67
USP11-208ENST00000480104 B4GALT2O60909 372 aa10.89□□□□□ -0.67
USP11-208ENST00000480104 NDUFS7O75251 213 aa10.89□□□□□ -0.67
USP11-208ENST00000480104 HSP90AA1P07900 732 aaKnown RBP10.89□□□□□ -0.67
USP11-208ENST00000480104 IGHV4-31P0DP07 118 aa10.89□□□□□ -0.67
USP11-208ENST00000480104 IL10P22301 178 aa10.89□□□□□ -0.67
USP11-208ENST00000480104 CCR7P32248 378 aa10.89□□□□□ -0.67
USP11-208ENST00000480104 PIGAP37287 484 aa10.89□□□□□ -0.67
USP11-208ENST00000480104 ACTG1P63261 375 aa10.89□□□□□ -0.67
USP11-208ENST00000480104 WASHC5Q12768 1159 aa10.89□□□□□ -0.67
USP11-208ENST00000480104 DUSP8Q13202 625 aa10.89□□□□□ -0.67
USP11-208ENST00000480104 PDK2Q15119 407 aa10.89□□□□□ -0.67
USP11-208ENST00000480104 P3H1Q32P28 736 aa10.89□□□□□ -0.67
USP11-208ENST00000480104 CYB5R2Q6BCY4 276 aa10.89□□□□□ -0.67
USP11-208ENST00000480104 TMEM214Q6NUQ4 689 aaKnown RBP10.89□□□□□ -0.67
USP11-208ENST00000480104 TTC23LQ6PF05 361 aa10.89□□□□□ -0.67
USP11-208ENST00000480104 SUSD1Q6UWL2 747 aa10.89□□□□□ -0.67
USP11-208ENST00000480104 PACS1Q6VY07 963 aa10.89□□□□□ -0.67
USP11-208ENST00000480104 VN1R4Q7Z5H5 301 aa10.89□□□□□ -0.67
USP11-208ENST00000480104 ADCK2Q7Z695 626 aa10.89□□□□□ -0.67
USP11-208ENST00000480104 CPNE8Q86YQ8 564 aa10.89□□□□□ -0.67
USP11-208ENST00000480104 PM20D2Q8IYS1 436 aa10.89□□□□□ -0.67
USP11-208ENST00000480104 RASGEF1CQ8N431 466 aa10.89□□□□□ -0.67
USP11-208ENST00000480104 B3GNT7Q8NFL0 401 aa10.89□□□□□ -0.67
USP11-208ENST00000480104 GTPBP3Q969Y2 492 aaKnown RBP10.89□□□□□ -0.67
USP11-208ENST00000480104 RAD51AP1Q96B01 352 aa10.89□□□□□ -0.67
USP11-208ENST00000480104 TBC1D20Q96BZ9 403 aa10.89□□□□□ -0.67
USP11-208ENST00000480104 PTCHD1Q96NR3 888 aa10.89□□□□□ -0.67
USP11-208ENST00000480104 RASL10BQ96S79 203 aa10.89□□□□□ -0.67
USP11-208ENST00000480104 ZNF696Q9H7X3 374 aa10.89□□□□□ -0.67
USP11-208ENST00000480104 ACKR4Q9NPB9 350 aa10.89□□□□□ -0.67
USP11-208ENST00000480104 RUVBL2Q9Y230 463 aaKnown RBP10.89□□□□□ -0.67
USP11-208ENST00000480104 SCN3AQ9NY46 2000 aa10.89□□□□□ -0.67
USP11-208ENST00000480104 EML6Q6ZMW3 1958 aa10.88□□□□□ -0.67
USP11-208ENST00000480104 HEATR5BQ9P2D3 2071 aa10.88□□□□□ -0.67
USP11-208ENST00000480104 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.88□□□□□ -0.67
USP11-208ENST00000480104 SLC35F4A4IF30 521 aa10.88□□□□□ -0.67
USP11-208ENST00000480104 LRRC3CA6NJW4 275 aa10.88□□□□□ -0.67
USP11-208ENST00000480104 KPNA5O15131 536 aa10.88□□□□□ -0.67
USP11-208ENST00000480104 GPC4O75487 556 aa10.88□□□□□ -0.67
USP11-208ENST00000480104 MYO1DO94832 1006 aa10.88□□□□□ -0.67
USP11-208ENST00000480104 CRTAMO95727 393 aa10.88□□□□□ -0.67
USP11-208ENST00000480104 P04436 131 aa10.88□□□□□ -0.67
USP11-208ENST00000480104 OR56A5P0C7T3 313 aa10.88□□□□□ -0.67
USP11-208ENST00000480104 HNF1AP20823 631 aa10.88□□□□□ -0.67
USP11-208ENST00000480104 MAOAP21397 527 aa10.88□□□□□ -0.67
USP11-208ENST00000480104 DIO3P55073 304 aa10.88□□□□□ -0.67
USP11-208ENST00000480104 BTG2P78543 158 aa10.88□□□□□ -0.67
USP11-208ENST00000480104 MPP3Q13368 585 aa10.88□□□□□ -0.67
USP11-208ENST00000480104 SF3B4Q15427 424 aaKnown RBP eCLIP10.88□□□□□ -0.67
USP11-208ENST00000480104 HADHQ16836 314 aaKnown RBP10.88□□□□□ -0.67
USP11-208ENST00000480104 ABHD17CQ6PCB6 329 aa10.88□□□□□ -0.67
USP11-208ENST00000480104 MAP7D3Q8IWC1 876 aa10.88□□□□□ -0.67
USP11-208ENST00000480104 LRRC25Q8N386 305 aaPredicted RBP10.88□□□□□ -0.67
USP11-208ENST00000480104 LRRC17Q8N6Y2 441 aa10.88□□□□□ -0.67
USP11-208ENST00000480104 GOLM1Q8NBJ4 401 aa10.88□□□□□ -0.67
USP11-208ENST00000480104 MCUQ8NE86 351 aa10.88□□□□□ -0.67
USP11-208ENST00000480104 LKAAEAR1Q8TD35 194 aa10.88□□□□□ -0.67
USP11-208ENST00000480104 RNF157Q96PX1 679 aa10.88□□□□□ -0.67
USP11-208ENST00000480104 FCRL5Q96RD9 977 aa10.88□□□□□ -0.67
USP11-208ENST00000480104 SLC30A3Q99726 388 aa10.88□□□□□ -0.67
USP11-208ENST00000480104 APOL2Q9BQE5 337 aa10.88□□□□□ -0.67
USP11-208ENST00000480104 RHNO1Q9BSD3 238 aa10.88□□□□□ -0.67
USP11-208ENST00000480104 PIGMQ9H3S5 423 aa10.88□□□□□ -0.67
USP11-208ENST00000480104 CALHM2Q9HA72 323 aa10.88□□□□□ -0.67
USP11-208ENST00000480104 SAMD15Q9P1V8 674 aa10.88□□□□□ -0.67
USP11-208ENST00000480104 KCNS2Q9ULS6 477 aa10.88□□□□□ -0.67
USP11-208ENST00000480104 NAALAD2Q9Y3Q0 740 aa10.88□□□□□ -0.67
USP11-208ENST00000480104 PCDHA13Q9Y5I0 950 aa10.88□□□□□ -0.67
USP11-208ENST00000480104 ALPK2Q86TB3 2170 aa10.87□□□□□ -0.67
USP11-208ENST00000480104 IGKV3D-11A0A0A0MRZ8 115 aa10.87□□□□□ -0.67
USP11-208ENST00000480104 TCRBV16S1A1N1A0A5B0 115 aa10.87□□□□□ -0.67
USP11-208ENST00000480104 FAM234BA2RU67 622 aa10.87□□□□□ -0.67
USP11-208ENST00000480104 WWP2O00308 870 aa10.87□□□□□ -0.67
USP11-208ENST00000480104 TMPRSS2O15393 492 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms