RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 PCNAP12004 261 aa25.39■■□□□ 1.66
CCM2-211ENST00000478582 FBLP22087 321 aaKnown RBP25.39■■□□□ 1.66
CCM2-211ENST00000478582 ALDH3A1P30838 453 aa25.39■■□□□ 1.66
CCM2-211ENST00000478582 HNRNPH1P31943 449 aaKnown RBP25.39■■□□□ 1.66
CCM2-211ENST00000478582 ARL1P40616 181 aaPredicted RBP25.39■■□□□ 1.66
CCM2-211ENST00000478582 ZRSR2Q15696 482 aaKnown RBP25.39■■□□□ 1.66
CCM2-211ENST00000478582 TOR1AIP1Q5JTV8 583 aa25.39■■□□□ 1.66
CCM2-211ENST00000478582 PRSS41Q7RTY9 318 aa25.39■■□□□ 1.66
CCM2-211ENST00000478582 PDSS2Q86YH6 399 aa25.39■■□□□ 1.66
CCM2-211ENST00000478582 AMER3Q8N944 861 aa25.39■■□□□ 1.66
CCM2-211ENST00000478582 HUS1BQ8NHY5 278 aa25.39■■□□□ 1.66
CCM2-211ENST00000478582 STARD8Q92502 1023 aa25.39■■□□□ 1.66
CCM2-211ENST00000478582 CCT6BQ92526 530 aa25.39■■□□□ 1.66
CCM2-211ENST00000478582 GAL3ST3Q96A11 431 aa25.39■■□□□ 1.66
CCM2-211ENST00000478582 MS4A6EQ96DS6 147 aa25.39■■□□□ 1.66
CCM2-211ENST00000478582 MS4A8Q9BY19 250 aa25.39■■□□□ 1.66
CCM2-211ENST00000478582 ACTL8Q9H568 366 aa25.39■■□□□ 1.66
CCM2-211ENST00000478582 TCFL5Q9UL49 500 aa25.39■■□□□ 1.66
CCM2-211ENST00000478582 PADI2Q9Y2J8 665 aa25.39■■□□□ 1.66
CCM2-211ENST00000478582 MAP4K5Q9Y4K4 846 aa25.39■■□□□ 1.66
CCM2-211ENST00000478582 SEC16AO15027 2179 aa25.39■■□□□ 1.65
CCM2-211ENST00000478582 H3BQF6 201 aa25.38■■□□□ 1.65
CCM2-211ENST00000478582 GALR3O60755 368 aaPredicted RBP25.38■■□□□ 1.65
CCM2-211ENST00000478582 CNOT3O75175 753 aaKnown RBP25.38■■□□□ 1.65
CCM2-211ENST00000478582 CREG1O75629 220 aa25.38■■□□□ 1.65
CCM2-211ENST00000478582 KLF7O75840 302 aaPredicted RBP25.38■■□□□ 1.65
CCM2-211ENST00000478582 ZNF888P0CJ79 500 aaPredicted RBP25.38■■□□□ 1.65
CCM2-211ENST00000478582 IL1RNP18510 177 aa25.38■■□□□ 1.65
CCM2-211ENST00000478582 PKNOX1P55347 436 aa25.38■■□□□ 1.65
CCM2-211ENST00000478582 SKP1P63208 163 aa25.38■■□□□ 1.65
CCM2-211ENST00000478582 SLC9A5Q14940 896 aa25.38■■□□□ 1.65
CCM2-211ENST00000478582 AGBL2Q5U5Z8 902 aa25.38■■□□□ 1.65
CCM2-211ENST00000478582 LETMD1Q6P1Q0 360 aa25.38■■□□□ 1.65
CCM2-211ENST00000478582 FRMD7Q6ZUT3 714 aa25.38■■□□□ 1.65
CCM2-211ENST00000478582 SYVN1Q86TM6 617 aa25.38■■□□□ 1.65
CCM2-211ENST00000478582 CLK4Q9HAZ1 481 aaKnown RBP25.38■■□□□ 1.65
CCM2-211ENST00000478582 PPT2Q9UMR5 302 aa25.38■■□□□ 1.65
CCM2-211ENST00000478582 NAALAD2Q9Y3Q0 740 aa25.38■■□□□ 1.65
CCM2-211ENST00000478582 MRPS18BQ9Y676 258 aaKnown RBP25.38■■□□□ 1.65
CCM2-211ENST00000478582 VSTM2BA6NLU5 285 aa25.37■■□□□ 1.65
CCM2-211ENST00000478582 FOXE1O00358 373 aaPredicted RBP25.37■■□□□ 1.65
CCM2-211ENST00000478582 KLHL18O94889 574 aa25.37■■□□□ 1.65
CCM2-211ENST00000478582 ZWINTO95229 277 aa25.37■■□□□ 1.65
CCM2-211ENST00000478582 PHEXP78562 749 aa25.37■■□□□ 1.65
CCM2-211ENST00000478582 CDC20Q12834 499 aa25.37■■□□□ 1.65
CCM2-211ENST00000478582 NKG7Q16617 165 aa25.37■■□□□ 1.65
CCM2-211ENST00000478582 CFAP157Q5JU67 520 aa25.37■■□□□ 1.65
CCM2-211ENST00000478582 FRG2Q64ET8 278 aa25.37■■□□□ 1.65
CCM2-211ENST00000478582 BORAQ6PGQ7 559 aa25.37■■□□□ 1.65
CCM2-211ENST00000478582 GPRIN3Q6ZVF9 776 aa25.37■■□□□ 1.65
CCM2-211ENST00000478582 OR2L5Q8NG80 312 aa25.37■■□□□ 1.65
CCM2-211ENST00000478582 CMTM7Q96FZ5 175 aa25.37■■□□□ 1.65
CCM2-211ENST00000478582 FRG2BQ96QU4 278 aa25.37■■□□□ 1.65
CCM2-211ENST00000478582 GATA5Q9BWX5 397 aaPredicted RBP25.37■■□□□ 1.65
CCM2-211ENST00000478582 REXO4Q9GZR2 422 aaKnown RBP25.37■■□□□ 1.65
CCM2-211ENST00000478582 ZNF282Q9UDV7 671 aaPredicted RBP25.37■■□□□ 1.65
CCM2-211ENST00000478582 NXT1Q9UKK6 140 aaKnown RBP25.37■■□□□ 1.65
CCM2-211ENST00000478582 C4orf51C9J302 202 aa25.36■■□□□ 1.65
CCM2-211ENST00000478582 OR4F21O95013 312 aa25.36■■□□□ 1.65
CCM2-211ENST00000478582 BPGMP07738 259 aa25.36■■□□□ 1.65
CCM2-211ENST00000478582 SLC18A1P54219 525 aa25.36■■□□□ 1.65
CCM2-211ENST00000478582 MPP2Q14168 576 aa25.36■■□□□ 1.65
CCM2-211ENST00000478582 DEFB134Q4QY38 66 aa25.36■■□□□ 1.65
CCM2-211ENST00000478582 TMEM35AQ53FP2 167 aa25.36■■□□□ 1.65
CCM2-211ENST00000478582 CHSY3Q70JA7 882 aa25.36■■□□□ 1.65
CCM2-211ENST00000478582 SRFBP1Q8NEF9 429 aaKnown RBP25.36■■□□□ 1.65
CCM2-211ENST00000478582 CNDP1Q96KN2 507 aa25.36■■□□□ 1.65
CCM2-211ENST00000478582 TGIF2Q9GZN2 237 aa25.36■■□□□ 1.65
CCM2-211ENST00000478582 KCNK9Q9NPC2 374 aa25.36■■□□□ 1.65
CCM2-211ENST00000478582 MKKSQ9NPJ1 570 aaPredicted RBP25.36■■□□□ 1.65
CCM2-211ENST00000478582 DMRT3Q9NQL9 472 aa25.36■■□□□ 1.65
CCM2-211ENST00000478582 COL6A6A6NMZ7 2263 aa25.36■■□□□ 1.65
CCM2-211ENST00000478582 BAHCC1Q9P281 2608 aa25.36■■□□□ 1.65
CCM2-211ENST00000478582 SGK494L7N484 410 aa25.35■■□□□ 1.65
CCM2-211ENST00000478582 ESRRBO95718 433 aa25.35■■□□□ 1.65
CCM2-211ENST00000478582 FAM87AP0C7U9 286 aa25.35■■□□□ 1.65
CCM2-211ENST00000478582 DHRS4L1P0CG22 281 aa25.35■■□□□ 1.65
CCM2-211ENST00000478582 PRKAR1AP10644 381 aa25.35■■□□□ 1.65
CCM2-211ENST00000478582 SFTPCP11686 197 aa25.35■■□□□ 1.65
CCM2-211ENST00000478582 RAB8AP61006 207 aa25.35■■□□□ 1.65
CCM2-211ENST00000478582 MAGOHP61326 146 aaKnown RBP25.35■■□□□ 1.65
CCM2-211ENST00000478582 RPS18P62269 152 aaKnown RBP25.35■■□□□ 1.65
CCM2-211ENST00000478582 OCA2Q04671 838 aa25.35■■□□□ 1.65
CCM2-211ENST00000478582 TGM3Q08188 693 aa25.35■■□□□ 1.65
CCM2-211ENST00000478582 DEPDC1Q5TB30 811 aa25.35■■□□□ 1.65
CCM2-211ENST00000478582 ABHD17CQ6PCB6 329 aa25.35■■□□□ 1.65
CCM2-211ENST00000478582 OR2Y1Q8NGV0 311 aa25.35■■□□□ 1.65
CCM2-211ENST00000478582 AGAP11Q8TF27 550 aa25.35■■□□□ 1.65
CCM2-211ENST00000478582 F2RL3Q96RI0 385 aa25.35■■□□□ 1.65
CCM2-211ENST00000478582 MTERF1Q99551 399 aaKnown RBP25.35■■□□□ 1.65
CCM2-211ENST00000478582 SPSB2Q99619 263 aa25.35■■□□□ 1.65
CCM2-211ENST00000478582 SH3GL2Q99962 352 aa25.35■■□□□ 1.65
CCM2-211ENST00000478582 TRMOQ9BU70 441 aa25.35■■□□□ 1.65
CCM2-211ENST00000478582 MECRQ9BV79 373 aa25.35■■□□□ 1.65
CCM2-211ENST00000478582 SLC29A3Q9BZD2 475 aa25.35■■□□□ 1.65
CCM2-211ENST00000478582 TRPC4Q9UBN4 977 aa25.35■■□□□ 1.65
CCM2-211ENST00000478582 CTSFQ9UBX1 484 aa25.35■■□□□ 1.65
CCM2-211ENST00000478582 SNX6Q9UNH7 406 aa25.35■■□□□ 1.65
CCM2-211ENST00000478582 KALRNO60229 2985 aa25.34■■□□□ 1.65
CCM2-211ENST00000478582 MAGEB17A8MXT2 336 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms