RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 TGM3Q08188 693 aa12.68□□□□□ -0.38
ACTN4-205ENST00000477174 MINDY4Q4G0A6 757 aa12.68□□□□□ -0.38
ACTN4-205ENST00000477174 TOR1AIP1Q5JTV8 583 aa12.68□□□□□ -0.38
ACTN4-205ENST00000477174 IRAK1BP1Q5VVH5 260 aa12.68□□□□□ -0.38
ACTN4-205ENST00000477174 MED27Q6P2C8 311 aa12.68□□□□□ -0.38
ACTN4-205ENST00000477174 VN1R5Q7Z5H4 357 aa12.68□□□□□ -0.38
ACTN4-205ENST00000477174 TMEM151AQ8N4L1 468 aa12.68□□□□□ -0.38
ACTN4-205ENST00000477174 PLPP5Q8NEB5 264 aa12.68□□□□□ -0.38
ACTN4-205ENST00000477174 SRFBP1Q8NEF9 429 aaKnown RBP12.68□□□□□ -0.38
ACTN4-205ENST00000477174 OR5T3Q8NGG3 340 aa12.68□□□□□ -0.38
ACTN4-205ENST00000477174 UBLCP1Q8WVY7 318 aaPredicted RBP12.68□□□□□ -0.38
ACTN4-205ENST00000477174 CCT6BQ92526 530 aa12.68□□□□□ -0.38
ACTN4-205ENST00000477174 GAL3ST3Q96A11 431 aa12.68□□□□□ -0.38
ACTN4-205ENST00000477174 C8orf44Q96CB5 159 aa12.68□□□□□ -0.38
ACTN4-205ENST00000477174 MS4A6EQ96DS6 147 aa12.68□□□□□ -0.38
ACTN4-205ENST00000477174 PEX11GQ96HA9 241 aa12.68□□□□□ -0.38
ACTN4-205ENST00000477174 NPLQ9BXD5 320 aaPredicted RBP12.68□□□□□ -0.38
ACTN4-205ENST00000477174 REXO4Q9GZR2 422 aaKnown RBP12.68□□□□□ -0.38
ACTN4-205ENST00000477174 AICDAQ9GZX7 198 aa12.68□□□□□ -0.38
ACTN4-205ENST00000477174 LHPPQ9H008 270 aa12.68□□□□□ -0.38
ACTN4-205ENST00000477174 ZNF700Q9H0M5 742 aa12.68□□□□□ -0.38
ACTN4-205ENST00000477174 ZNF552Q9H707 407 aaPredicted RBP12.68□□□□□ -0.38
ACTN4-205ENST00000477174 TSC22D4Q9Y3Q8 395 aa12.68□□□□□ -0.38
ACTN4-205ENST00000477174 IGHV1-45A0A0A0MS14 117 aa12.67□□□□□ -0.38
ACTN4-205ENST00000477174 ZNF860A6NHJ4 632 aa12.67□□□□□ -0.38
ACTN4-205ENST00000477174 E2F3O00716 465 aa12.67□□□□□ -0.38
ACTN4-205ENST00000477174 ERI3O43414 337 aaKnown RBP12.67□□□□□ -0.38
ACTN4-205ENST00000477174 SLC28A2O43868 658 aa12.67□□□□□ -0.38
ACTN4-205ENST00000477174 DPM1O60762 260 aa12.67□□□□□ -0.38
ACTN4-205ENST00000477174 DNAJB6O75190 326 aa12.67□□□□□ -0.38
ACTN4-205ENST00000477174 TBX6O95947 436 aaPredicted RBP12.67□□□□□ -0.38
ACTN4-205ENST00000477174 FHP07954 510 aa12.67□□□□□ -0.38
ACTN4-205ENST00000477174 COX6A1P12074 109 aa12.67□□□□□ -0.38
ACTN4-205ENST00000477174 NR1D1P20393 614 aa12.67□□□□□ -0.38
ACTN4-205ENST00000477174 JAK1P23458 1154 aa12.67□□□□□ -0.38
ACTN4-205ENST00000477174 ITGA3P26006 1051 aa12.67□□□□□ -0.38
ACTN4-205ENST00000477174 HNRNPH1P31943 449 aaKnown RBP12.67□□□□□ -0.38
ACTN4-205ENST00000477174 AP2B1P63010 937 aa12.67□□□□□ -0.38
ACTN4-205ENST00000477174 GTF2H2Q13888 395 aa12.67□□□□□ -0.38
ACTN4-205ENST00000477174 RASA2Q15283 850 aa12.67□□□□□ -0.38
ACTN4-205ENST00000477174 TMEM35AQ53FP2 167 aa12.67□□□□□ -0.38
ACTN4-205ENST00000477174 MFSD4BQ5TF39 518 aa12.67□□□□□ -0.38
ACTN4-205ENST00000477174 AGAP7PQ5VUJ5 663 aa12.67□□□□□ -0.38
ACTN4-205ENST00000477174 GRHL2Q6ISB3 625 aa12.67□□□□□ -0.38
ACTN4-205ENST00000477174 GTF2H2CQ6P1K8 395 aa12.67□□□□□ -0.38
ACTN4-205ENST00000477174 IGFL3Q6UXB1 125 aa12.67□□□□□ -0.38
ACTN4-205ENST00000477174 CHSY3Q70JA7 882 aa12.67□□□□□ -0.38
ACTN4-205ENST00000477174 PRICKLE2Q7Z3G6 844 aa12.67□□□□□ -0.38
ACTN4-205ENST00000477174 TDRPQ86YL5 185 aa12.67□□□□□ -0.38
ACTN4-205ENST00000477174 PARP9Q8IXQ6 854 aa12.67□□□□□ -0.38
ACTN4-205ENST00000477174 KBTBD2Q8IY47 623 aa12.67□□□□□ -0.38
ACTN4-205ENST00000477174 PTGR2Q8N8N7 351 aaPredicted RBP12.67□□□□□ -0.38
ACTN4-205ENST00000477174 OR2L5Q8NG80 312 aa12.67□□□□□ -0.38
ACTN4-205ENST00000477174 OR7G3Q8NG95 312 aa12.67□□□□□ -0.38
ACTN4-205ENST00000477174 TM9SF4Q92544 642 aa12.67□□□□□ -0.38
ACTN4-205ENST00000477174 PHF21BQ96EK2 531 aa12.67□□□□□ -0.38
ACTN4-205ENST00000477174 AGAP4Q96P64 663 aa12.67□□□□□ -0.38
ACTN4-205ENST00000477174 MESP1Q9BRJ9 268 aa12.67□□□□□ -0.38
ACTN4-205ENST00000477174 IPPKQ9H8X2 491 aa12.67□□□□□ -0.38
ACTN4-205ENST00000477174 ACTR8Q9H981 624 aa12.67□□□□□ -0.38
ACTN4-205ENST00000477174 ZNF160Q9HCG1 818 aa12.67□□□□□ -0.38
ACTN4-205ENST00000477174 LANCL2Q9NS86 450 aa12.67□□□□□ -0.38
ACTN4-205ENST00000477174 RIC8BQ9NVN3 520 aa12.67□□□□□ -0.38
ACTN4-205ENST00000477174 XPR1Q9UBH6 696 aa12.67□□□□□ -0.38
ACTN4-205ENST00000477174 C19orf25Q9UFG5 118 aaPredicted RBP12.67□□□□□ -0.38
ACTN4-205ENST00000477174 DCDC2Q9UHG0 476 aa12.67□□□□□ -0.38
ACTN4-205ENST00000477174 PCDHGA11Q9Y5H2 935 aa12.67□□□□□ -0.38
ACTN4-205ENST00000477174 HELZ2Q9BYK8 2649 aaKnown RBP12.67□□□□□ -0.38
ACTN4-205ENST00000477174 MAGEB17A8MXT2 336 aa12.66□□□□□ -0.38
ACTN4-205ENST00000477174 H0YIV9 168 aa12.66□□□□□ -0.38
ACTN4-205ENST00000477174 MASP2O00187 686 aa12.66□□□□□ -0.38
ACTN4-205ENST00000477174 PSMD12O00232 456 aaPredicted RBP12.66□□□□□ -0.38
ACTN4-205ENST00000477174 SIX3O95343 332 aaPredicted RBP12.66□□□□□ -0.38
ACTN4-205ENST00000477174 B3GALT4O96024 378 aa12.66□□□□□ -0.38
ACTN4-205ENST00000477174 SERPINA7P05543 415 aa12.66□□□□□ -0.38
ACTN4-205ENST00000477174 GSTA1P08263 222 aa12.66□□□□□ -0.38
ACTN4-205ENST00000477174 RNH1P13489 461 aaKnown RBP12.66□□□□□ -0.38
ACTN4-205ENST00000477174 PLA2G2AP14555 144 aa12.66□□□□□ -0.38
ACTN4-205ENST00000477174 PIK3CBP42338 1070 aa12.66□□□□□ -0.38
ACTN4-205ENST00000477174 RHAGQ02094 409 aa12.66□□□□□ -0.38
ACTN4-205ENST00000477174 Q0VFX4 171 aa12.66□□□□□ -0.38
ACTN4-205ENST00000477174 RAPSNQ13702 412 aa12.66□□□□□ -0.38
ACTN4-205ENST00000477174 NSDHLQ15738 373 aa12.66□□□□□ -0.38
ACTN4-205ENST00000477174 FAAH2Q6GMR7 532 aa12.66□□□□□ -0.38
ACTN4-205ENST00000477174 WDR93Q6P2C0 686 aa12.66□□□□□ -0.38
ACTN4-205ENST00000477174 TRIM40Q6P9F5 258 aa12.66□□□□□ -0.38
ACTN4-205ENST00000477174 ABHD17CQ6PCB6 329 aa12.66□□□□□ -0.38
ACTN4-205ENST00000477174 RIPOR1Q6ZS17 1223 aa12.66□□□□□ -0.38
ACTN4-205ENST00000477174 GOLGA7Q7Z5G4 137 aa12.66□□□□□ -0.38
ACTN4-205ENST00000477174 CPEB2Q7Z5Q1 589 aaKnown RBP12.66□□□□□ -0.38
ACTN4-205ENST00000477174 SHISA5Q8N114 240 aa12.66□□□□□ -0.38
ACTN4-205ENST00000477174 L3MBTL4Q8NA19 623 aa12.66□□□□□ -0.38
ACTN4-205ENST00000477174 ZNF473Q8WTR7 871 aaKnown RBP12.66□□□□□ -0.38
ACTN4-205ENST00000477174 REPS1Q96D71 796 aa12.66□□□□□ -0.38
ACTN4-205ENST00000477174 CMTM7Q96FZ5 175 aa12.66□□□□□ -0.38
ACTN4-205ENST00000477174 THOC3Q96J01 351 aaKnown RBP12.66□□□□□ -0.38
ACTN4-205ENST00000477174 IMMP1LQ96LU5 166 aa12.66□□□□□ -0.38
ACTN4-205ENST00000477174 F2RL3Q96RI0 385 aa12.66□□□□□ -0.38
ACTN4-205ENST00000477174 TUBB6Q9BUF5 446 aa12.66□□□□□ -0.38
ACTN4-205ENST00000477174 ROGDIQ9GZN7 287 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms