RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 DTD2Q96FN9 168 aa5.17□□□□□ -1.58
VPS50-212ENST00000476413 LURAP1Q96LR2 239 aa5.17□□□□□ -1.58
VPS50-212ENST00000476413 FSD1Q9BTV5 496 aa5.17□□□□□ -1.58
VPS50-212ENST00000476413 FUCA2Q9BTY2 467 aa5.17□□□□□ -1.58
VPS50-212ENST00000476413 NTMT1Q9BV86 223 aa5.17□□□□□ -1.58
VPS50-212ENST00000476413 POLKQ9UBT6 870 aa5.17□□□□□ -1.58
VPS50-212ENST00000476413 IL19Q9UHD0 177 aa5.17□□□□□ -1.58
VPS50-212ENST00000476413 MOSPD1Q9UJG1 213 aa5.17□□□□□ -1.58
VPS50-212ENST00000476413 POMT2Q9UKY4 750 aa5.17□□□□□ -1.58
VPS50-212ENST00000476413 TDRKHQ9Y2W6 561 aaKnown RBP5.17□□□□□ -1.58
VPS50-212ENST00000476413 SLC15A5A6NIM6 579 aa5.16□□□□□ -1.58
VPS50-212ENST00000476413 SLC9B1P1A6NJY1 282 aa5.16□□□□□ -1.58
VPS50-212ENST00000476413 TLR4O00206 839 aa5.16□□□□□ -1.58
VPS50-212ENST00000476413 CLN5O75503 358 aa5.16□□□□□ -1.58
VPS50-212ENST00000476413 GRAP2O75791 330 aa5.16□□□□□ -1.58
VPS50-212ENST00000476413 HMBSP08397 361 aa5.16□□□□□ -1.58
VPS50-212ENST00000476413 ODC1P11926 461 aa5.16□□□□□ -1.58
VPS50-212ENST00000476413 TNFSF10P50591 281 aa5.16□□□□□ -1.58
VPS50-212ENST00000476413 CASP9P55211 416 aa5.16□□□□□ -1.58
VPS50-212ENST00000476413 BPIFB3P59826 476 aa5.16□□□□□ -1.58
VPS50-212ENST00000476413 BTG1P62324 171 aa5.16□□□□□ -1.58
VPS50-212ENST00000476413 ZNF876PQ49A33 203 aa5.16□□□□□ -1.58
VPS50-212ENST00000476413 LRRC37A5PQ49AS3 106 aa5.16□□□□□ -1.58
VPS50-212ENST00000476413 ZNF776Q68DI1 518 aaPredicted RBP5.16□□□□□ -1.58
VPS50-212ENST00000476413 SLC27A4Q6P1M0 643 aa5.16□□□□□ -1.58
VPS50-212ENST00000476413 Q6ZSR9 355 aa5.16□□□□□ -1.58
VPS50-212ENST00000476413 USP43Q70EL4 1123 aa5.16□□□□□ -1.58
VPS50-212ENST00000476413 ZSCAN30Q86W11 494 aa5.16□□□□□ -1.58
VPS50-212ENST00000476413 LSMEM2Q8N112 164 aa5.16□□□□□ -1.58
VPS50-212ENST00000476413 ZNF486Q96H40 463 aaPredicted RBP5.16□□□□□ -1.58
VPS50-212ENST00000476413 FNDC4Q9H6D8 234 aaPredicted RBP5.16□□□□□ -1.58
VPS50-212ENST00000476413 KCNMB3Q9NPA1 279 aa5.16□□□□□ -1.58
VPS50-212ENST00000476413 ANO10Q9NW15 660 aa5.16□□□□□ -1.58
VPS50-212ENST00000476413 PILRAQ9UKJ1 303 aa5.16□□□□□ -1.58
VPS50-212ENST00000476413 WDR37Q9Y2I8 494 aa5.16□□□□□ -1.58
VPS50-212ENST00000476413 NOTCH4Q99466 2003 aa5.16□□□□□ -1.58
VPS50-212ENST00000476413 MAGEB2O15479 319 aa5.15□□□□□ -1.59
VPS50-212ENST00000476413 ECE2O60344 883 aa5.15□□□□□ -1.59
VPS50-212ENST00000476413 LRCH4O75427 683 aa5.15□□□□□ -1.59
VPS50-212ENST00000476413 SP1P08047 785 aa5.15□□□□□ -1.59
VPS50-212ENST00000476413 CFC1BP0CG36 223 aa5.15□□□□□ -1.59
VPS50-212ENST00000476413 CFC1P0CG37 223 aa5.15□□□□□ -1.59
VPS50-212ENST00000476413 UGT1A6P19224 532 aa5.15□□□□□ -1.59
VPS50-212ENST00000476413 AADACP22760 399 aa5.15□□□□□ -1.59
VPS50-212ENST00000476413 GFPT1Q06210 699 aaPredicted RBP5.15□□□□□ -1.59
VPS50-212ENST00000476413 LCP2Q13094 533 aa5.15□□□□□ -1.59
VPS50-212ENST00000476413 CEACAM7Q14002 265 aa5.15□□□□□ -1.59
VPS50-212ENST00000476413 TAB1Q15750 504 aa5.15□□□□□ -1.59
VPS50-212ENST00000476413 ADAMTSL4-AS1Q5T5F5 129 aa5.15□□□□□ -1.59
VPS50-212ENST00000476413 ETFRF1Q6IPR1 90 aa5.15□□□□□ -1.59
VPS50-212ENST00000476413 HOGA1Q86XE5 327 aa5.15□□□□□ -1.59
VPS50-212ENST00000476413 STHQ8IWL8 128 aa5.15□□□□□ -1.59
VPS50-212ENST00000476413 THEM5Q8N1Q8 247 aa5.15□□□□□ -1.59
VPS50-212ENST00000476413 RNF149Q8NC42 400 aa5.15□□□□□ -1.59
VPS50-212ENST00000476413 OR52E1Q8NGJ3 308 aa5.15□□□□□ -1.59
VPS50-212ENST00000476413 URGCPQ8TCY9 931 aa5.15□□□□□ -1.59
VPS50-212ENST00000476413 HAS2Q92819 552 aa5.15□□□□□ -1.59
VPS50-212ENST00000476413 SLC35C1Q96A29 364 aa5.15□□□□□ -1.59
VPS50-212ENST00000476413 BPIFA2Q96DR5 249 aa5.15□□□□□ -1.59
VPS50-212ENST00000476413 LITAFQ99732 161 aa5.15□□□□□ -1.59
VPS50-212ENST00000476413 LRRC2Q9BYS8 371 aa5.15□□□□□ -1.59
VPS50-212ENST00000476413 NYXQ9GZU5 481 aa5.15□□□□□ -1.59
VPS50-212ENST00000476413 CARD9Q9H257 536 aa5.15□□□□□ -1.59
VPS50-212ENST00000476413 ZNF696Q9H7X3 374 aa5.15□□□□□ -1.59
VPS50-212ENST00000476413 ATP6AP2A0A1C7CYW4 349 aa5.14□□□□□ -1.59
VPS50-212ENST00000476413 BICDL2A1A5D9 508 aa5.14□□□□□ -1.59
VPS50-212ENST00000476413 C15orf61A6NNL5 157 aa5.14□□□□□ -1.59
VPS50-212ENST00000476413 HHLA1C9JL84 531 aa5.14□□□□□ -1.59
VPS50-212ENST00000476413 SLCO1B7G3V0H7 640 aa5.14□□□□□ -1.59
VPS50-212ENST00000476413 CHUKO15111 745 aa5.14□□□□□ -1.59
VPS50-212ENST00000476413 P2RX6O15547 441 aa5.14□□□□□ -1.59
VPS50-212ENST00000476413 PSMD3O43242 534 aa5.14□□□□□ -1.59
VPS50-212ENST00000476413 CHRNGP07510 517 aa5.14□□□□□ -1.59
VPS50-212ENST00000476413 B4GALT1P15291 398 aa5.14□□□□□ -1.59
VPS50-212ENST00000476413 ITGB6P18564 788 aa5.14□□□□□ -1.59
VPS50-212ENST00000476413 PAX9P55771 341 aa5.14□□□□□ -1.59
VPS50-212ENST00000476413 MTF1Q14872 753 aa5.14□□□□□ -1.59
VPS50-212ENST00000476413 FAM106AQ4KMX7 169 aa5.14□□□□□ -1.59
VPS50-212ENST00000476413 EPC2Q52LR7 807 aa5.14□□□□□ -1.59
VPS50-212ENST00000476413 PARP10Q53GL7 1025 aa5.14□□□□□ -1.59
VPS50-212ENST00000476413 CCDC92Q53HC0 331 aaPredicted RBP5.14□□□□□ -1.59
VPS50-212ENST00000476413 FGD3Q5JSP0 725 aa5.14□□□□□ -1.59
VPS50-212ENST00000476413 SPANXN4Q5MJ08 99 aa5.14□□□□□ -1.59
VPS50-212ENST00000476413 ATP1A1-AS1Q5TC04 95 aa5.14□□□□□ -1.59
VPS50-212ENST00000476413 PLPP4Q5VZY2 271 aa5.14□□□□□ -1.59
VPS50-212ENST00000476413 TCEAL6Q6IPX3 200 aa5.14□□□□□ -1.59
VPS50-212ENST00000476413 PWWP2BQ6NUJ5 590 aa5.14□□□□□ -1.59
VPS50-212ENST00000476413 BHLHB9Q6PI77 547 aa5.14□□□□□ -1.59
VPS50-212ENST00000476413 CNSTQ6PJW8 725 aa5.14□□□□□ -1.59
VPS50-212ENST00000476413 CD164L2Q6UWJ8 174 aa5.14□□□□□ -1.59
VPS50-212ENST00000476413 B3GLCTQ6Y288 498 aa5.14□□□□□ -1.59
VPS50-212ENST00000476413 Q6ZRP5 223 aa5.14□□□□□ -1.59
VPS50-212ENST00000476413 CATSPERDQ86XM0 798 aa5.14□□□□□ -1.59
VPS50-212ENST00000476413 SIDT2Q8NBJ9 832 aaKnown RBP5.14□□□□□ -1.59
VPS50-212ENST00000476413 ULK4Q96C45 1275 aa5.14□□□□□ -1.59
VPS50-212ENST00000476413 EEF2KMTQ96G04 330 aa5.14□□□□□ -1.59
VPS50-212ENST00000476413 CFAP36Q96G28 342 aa5.14□□□□□ -1.59
VPS50-212ENST00000476413 LRR1Q96L50 414 aa5.14□□□□□ -1.59
VPS50-212ENST00000476413 ZNF560Q96MR9 790 aa5.14□□□□□ -1.59
VPS50-212ENST00000476413 GUCD1Q96NT3 240 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms