RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 ARMC3Q5W041 872 aa13.09□□□□□ -0.31
CCDC78-209ENST00000474647 UGT3A1Q6NUS8 523 aa13.09□□□□□ -0.31
CCDC78-209ENST00000474647 QSOX2Q6ZRP7 698 aa13.09□□□□□ -0.31
CCDC78-209ENST00000474647 ABHD13Q7L211 337 aa13.09□□□□□ -0.31
CCDC78-209ENST00000474647 SULF2Q8IWU5 870 aa13.09□□□□□ -0.31
CCDC78-209ENST00000474647 CYP4Z2PQ8N1L4 340 aa13.09□□□□□ -0.31
CCDC78-209ENST00000474647 SLC35F6Q8N357 371 aa13.09□□□□□ -0.31
CCDC78-209ENST00000474647 AFAP1L2Q8N4X5 818 aa13.09□□□□□ -0.31
CCDC78-209ENST00000474647 TBC1D19Q8N5T2 526 aa13.09□□□□□ -0.31
CCDC78-209ENST00000474647 ACBD4Q8NC06 268 aa13.09□□□□□ -0.31
CCDC78-209ENST00000474647 CALML6Q8TD86 181 aa13.09□□□□□ -0.31
CCDC78-209ENST00000474647 HAUS8Q9BT25 410 aa13.09□□□□□ -0.31
CCDC78-209ENST00000474647 AARSD1Q9BTE6 412 aaKnown RBP13.09□□□□□ -0.31
CCDC78-209ENST00000474647 SGPP1Q9BX95 441 aa13.09□□□□□ -0.31
CCDC78-209ENST00000474647 DEFB126Q9BYW3 111 aa13.09□□□□□ -0.31
CCDC78-209ENST00000474647 RHBGQ9H310 441 aa13.09□□□□□ -0.31
CCDC78-209ENST00000474647 PARVBQ9HBI1 364 aa13.09□□□□□ -0.31
CCDC78-209ENST00000474647 FBXO5Q9UKT4 447 aa13.09□□□□□ -0.31
CCDC78-209ENST00000474647 ZNF469Q96JG9 3925 aaPredicted RBP13.08□□□□□ -0.31
CCDC78-209ENST00000474647 TRBV11-1A0A0K0K1C0 115 aa13.08□□□□□ -0.32
CCDC78-209ENST00000474647 FOXO6A8MYZ6 492 aa13.08□□□□□ -0.32
CCDC78-209ENST00000474647 PSMD12O00232 456 aaPredicted RBP13.08□□□□□ -0.32
CCDC78-209ENST00000474647 PEX1O43933 1283 aa13.08□□□□□ -0.32
CCDC78-209ENST00000474647 KRT14P02533 472 aa13.08□□□□□ -0.32
CCDC78-209ENST00000474647 HIST1H2AGP0C0S8 130 aaPredicted RBP13.08□□□□□ -0.32
CCDC78-209ENST00000474647 CD1EP15812 388 aa13.08□□□□□ -0.32
CCDC78-209ENST00000474647 NPPBP16860 134 aa13.08□□□□□ -0.32
CCDC78-209ENST00000474647 TFEBP19484 476 aa13.08□□□□□ -0.32
CCDC78-209ENST00000474647 HIST1H2ADP20671 130 aa13.08□□□□□ -0.32
CCDC78-209ENST00000474647 DHX9Q08211 1270 aaKnown RBP13.08□□□□□ -0.32
CCDC78-209ENST00000474647 PWP1Q13610 501 aa13.08□□□□□ -0.32
CCDC78-209ENST00000474647 PHKG1Q16816 387 aa13.08□□□□□ -0.32
CCDC78-209ENST00000474647 HSP90AA5PQ58FG0 334 aa13.08□□□□□ -0.32
CCDC78-209ENST00000474647 TMEM211Q6ICI0 200 aa13.08□□□□□ -0.32
CCDC78-209ENST00000474647 LMNTD2Q8IXW0 634 aa13.08□□□□□ -0.32
CCDC78-209ENST00000474647 RPRMLQ8N4K4 120 aa13.08□□□□□ -0.32
CCDC78-209ENST00000474647 TMEM156Q8N614 296 aa13.08□□□□□ -0.32
CCDC78-209ENST00000474647 ASB5Q8WWX0 329 aa13.08□□□□□ -0.32
CCDC78-209ENST00000474647 LINGO1Q96FE5 620 aa13.08□□□□□ -0.32
CCDC78-209ENST00000474647 HIST1H2AHQ96KK5 128 aa13.08□□□□□ -0.32
CCDC78-209ENST00000474647 SERPINB12Q96P63 405 aa13.08□□□□□ -0.32
CCDC78-209ENST00000474647 HIST1H2AJQ99878 128 aa13.08□□□□□ -0.32
CCDC78-209ENST00000474647 TREX2Q9BQ50 279 aaPredicted RBP13.08□□□□□ -0.32
CCDC78-209ENST00000474647 ZNF559Q9BR84 538 aa13.08□□□□□ -0.32
CCDC78-209ENST00000474647 FAM167BQ9BTA0 163 aa13.08□□□□□ -0.32
CCDC78-209ENST00000474647 H2AFJQ9BTM1 129 aa13.08□□□□□ -0.32
CCDC78-209ENST00000474647 UCK2Q9BZX2 261 aa13.08□□□□□ -0.32
CCDC78-209ENST00000474647 TP63Q9H3D4 680 aaPredicted RBP13.08□□□□□ -0.32
CCDC78-209ENST00000474647 XAB2Q9HCS7 855 aaKnown RBP13.08□□□□□ -0.32
CCDC78-209ENST00000474647 NPDC1Q9NQX5 325 aaPredicted RBP13.08□□□□□ -0.32
CCDC78-209ENST00000474647 IARS2Q9NSE4 1012 aaKnown RBP13.08□□□□□ -0.32
CCDC78-209ENST00000474647 ARL15Q9NXU5 204 aa13.08□□□□□ -0.32
CCDC78-209ENST00000474647 FBXW2Q9UKT8 454 aa13.08□□□□□ -0.32
CCDC78-209ENST00000474647 RNF6Q9Y252 685 aa13.08□□□□□ -0.32
CCDC78-209ENST00000474647 AKAP6Q13023 2319 aa13.07□□□□□ -0.32
CCDC78-209ENST00000474647 TCRBV16S1A1N1A0A5B0 115 aa13.07□□□□□ -0.32
CCDC78-209ENST00000474647 TRBC2A0A5B9 178 aa13.07□□□□□ -0.32
CCDC78-209ENST00000474647 MAGEB16A2A368 324 aa13.07□□□□□ -0.32
CCDC78-209ENST00000474647 CDK2AP1O14519 115 aa13.07□□□□□ -0.32
CCDC78-209ENST00000474647 MYO1DO94832 1006 aa13.07□□□□□ -0.32
CCDC78-209ENST00000474647 CHRNB4P30926 498 aa13.07□□□□□ -0.32
CCDC78-209ENST00000474647 CXCR5P32302 372 aa13.07□□□□□ -0.32
CCDC78-209ENST00000474647 TRHRP34981 398 aaPredicted RBP13.07□□□□□ -0.32
CCDC78-209ENST00000474647 RAB8AP61006 207 aa13.07□□□□□ -0.32
CCDC78-209ENST00000474647 MYBPHQ13203 477 aa13.07□□□□□ -0.32
CCDC78-209ENST00000474647 CMPK2Q5EBM0 449 aa13.07□□□□□ -0.32
CCDC78-209ENST00000474647 CATSPEREQ5SY80 951 aa13.07□□□□□ -0.32
CCDC78-209ENST00000474647 NIPAL1Q6NVV3 410 aa13.07□□□□□ -0.32
CCDC78-209ENST00000474647 PAQR3Q6TCH7 311 aa13.07□□□□□ -0.32
CCDC78-209ENST00000474647 CCDC71Q8IV32 467 aaPredicted RBP13.07□□□□□ -0.32
CCDC78-209ENST00000474647 ARMC2Q8NEN0 867 aa13.07□□□□□ -0.32
CCDC78-209ENST00000474647 OR52N2Q8NGI0 321 aa13.07□□□□□ -0.32
CCDC78-209ENST00000474647 RND1Q92730 232 aa13.07□□□□□ -0.32
CCDC78-209ENST00000474647 SNF8Q96H20 258 aa13.07□□□□□ -0.32
CCDC78-209ENST00000474647 TSNARE1Q96NA8 513 aa13.07□□□□□ -0.32
CCDC78-209ENST00000474647 SPNS1Q9H2V7 528 aa13.07□□□□□ -0.32
CCDC78-209ENST00000474647 TRIM45Q9H8W5 580 aaPredicted RBP13.07□□□□□ -0.32
CCDC78-209ENST00000474647 KCNJ16Q9NPI9 418 aa13.07□□□□□ -0.32
CCDC78-209ENST00000474647 NECTIN3Q9NQS3 549 aa13.07□□□□□ -0.32
CCDC78-209ENST00000474647 PRDM9Q9NQV7 894 aa13.07□□□□□ -0.32
CCDC78-209ENST00000474647 TAS2R13Q9NYV9 303 aa13.07□□□□□ -0.32
CCDC78-209ENST00000474647 JRKLQ9Y4A0 524 aa13.07□□□□□ -0.32
CCDC78-209ENST00000474647 HRH3Q9Y5N1 445 aa13.07□□□□□ -0.32
CCDC78-209ENST00000474647 NAV3Q8IVL0 2385 aa13.06□□□□□ -0.32
CCDC78-209ENST00000474647 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.06□□□□□ -0.32
CCDC78-209ENST00000474647 SLC16A5O15375 505 aa13.06□□□□□ -0.32
CCDC78-209ENST00000474647 ITGA10O75578 1167 aa13.06□□□□□ -0.32
CCDC78-209ENST00000474647 GUCA1CO95843 209 aa13.06□□□□□ -0.32
CCDC78-209ENST00000474647 MLNP12872 115 aa13.06□□□□□ -0.32
CCDC78-209ENST00000474647 RNH1P13489 461 aaKnown RBP13.06□□□□□ -0.32
CCDC78-209ENST00000474647 IGFBP2P18065 325 aa13.06□□□□□ -0.32
CCDC78-209ENST00000474647 MSX1P28360 303 aa13.06□□□□□ -0.32
CCDC78-209ENST00000474647 MAGEA6P43360 314 aa13.06□□□□□ -0.32
CCDC78-209ENST00000474647 CLCN2P51788 898 aa13.06□□□□□ -0.32
CCDC78-209ENST00000474647 GNG11P61952 73 aa13.06□□□□□ -0.32
CCDC78-209ENST00000474647 CSHL1Q14406 222 aa13.06□□□□□ -0.32
CCDC78-209ENST00000474647 RBM20Q5T481 1227 aaKnown RBP13.06□□□□□ -0.32
CCDC78-209ENST00000474647 ARHGAP11AQ6P4F7 1023 aa13.06□□□□□ -0.32
CCDC78-209ENST00000474647 MDGA2Q7Z553 956 aa13.06□□□□□ -0.32
CCDC78-209ENST00000474647 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms