RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 GOLGA8MH3BSY2 632 aa12.99□□□□□ -0.33
SEMA3F-208ENST00000470737 CDC40O60508 579 aaKnown RBP eCLIP12.99□□□□□ -0.33
SEMA3F-208ENST00000470737 PTGER1P34995 402 aa12.99□□□□□ -0.33
SEMA3F-208ENST00000470737 HLCSP50747 726 aa12.99□□□□□ -0.33
SEMA3F-208ENST00000470737 OLR1P78380 273 aa12.99□□□□□ -0.33
SEMA3F-208ENST00000470737 HSP90AA5PQ58FG0 334 aa12.99□□□□□ -0.33
SEMA3F-208ENST00000470737 ZNF468Q5VIY5 522 aaPredicted RBP12.99□□□□□ -0.33
SEMA3F-208ENST00000470737 SPNS3Q6ZMD2 512 aa12.99□□□□□ -0.33
SEMA3F-208ENST00000470737 CEP128Q6ZU80 1094 aa12.99□□□□□ -0.33
SEMA3F-208ENST00000470737 CD163Q86VB7 1156 aa12.99□□□□□ -0.33
SEMA3F-208ENST00000470737 CREG2Q8IUH2 290 aa12.99□□□□□ -0.33
SEMA3F-208ENST00000470737 SPNS2Q8IVW8 549 aa12.99□□□□□ -0.33
SEMA3F-208ENST00000470737 AFAP1L2Q8N4X5 818 aa12.99□□□□□ -0.33
SEMA3F-208ENST00000470737 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.99□□□□□ -0.33
SEMA3F-208ENST00000470737 MCUQ8NE86 351 aa12.99□□□□□ -0.33
SEMA3F-208ENST00000470737 FAM57AQ8TBR7 257 aa12.99□□□□□ -0.33
SEMA3F-208ENST00000470737 RUNDC3BQ96NL0 473 aa12.99□□□□□ -0.33
SEMA3F-208ENST00000470737 SERPINB12Q96P63 405 aa12.99□□□□□ -0.33
SEMA3F-208ENST00000470737 SGPP1Q9BX95 441 aa12.99□□□□□ -0.33
SEMA3F-208ENST00000470737 TRIM54Q9BYV2 358 aa12.99□□□□□ -0.33
SEMA3F-208ENST00000470737 IARS2Q9NSE4 1012 aaKnown RBP12.99□□□□□ -0.33
SEMA3F-208ENST00000470737 ARL15Q9NXU5 204 aa12.99□□□□□ -0.33
SEMA3F-208ENST00000470737 ASB1Q9Y576 335 aa12.99□□□□□ -0.33
SEMA3F-208ENST00000470737 A0A1B0GTH9 108 aa12.98□□□□□ -0.33
SEMA3F-208ENST00000470737 TRBC2A0A5B9 178 aa12.98□□□□□ -0.33
SEMA3F-208ENST00000470737 ADAM10O14672 748 aa12.98□□□□□ -0.33
SEMA3F-208ENST00000470737 ZNF888P0CJ79 500 aaPredicted RBP12.98□□□□□ -0.33
SEMA3F-208ENST00000470737 RNH1P13489 461 aaKnown RBP12.98□□□□□ -0.33
SEMA3F-208ENST00000470737 NPPBP16860 134 aa12.98□□□□□ -0.33
SEMA3F-208ENST00000470737 TRHRP34981 398 aaPredicted RBP12.98□□□□□ -0.33
SEMA3F-208ENST00000470737 ETF1P62495 437 aaKnown RBP12.98□□□□□ -0.33
SEMA3F-208ENST00000470737 DHX9Q08211 1270 aaKnown RBP12.98□□□□□ -0.33
SEMA3F-208ENST00000470737 CSHL1Q14406 222 aa12.98□□□□□ -0.33
SEMA3F-208ENST00000470737 TESK1Q15569 626 aa12.98□□□□□ -0.33
SEMA3F-208ENST00000470737 KCTD19Q17RG1 926 aaPredicted RBP12.98□□□□□ -0.33
SEMA3F-208ENST00000470737 RNFT1Q5M7Z0 435 aa12.98□□□□□ -0.33
SEMA3F-208ENST00000470737 DUPD1Q68J44 220 aa12.98□□□□□ -0.33
SEMA3F-208ENST00000470737 TMEM156Q8N614 296 aa12.98□□□□□ -0.33
SEMA3F-208ENST00000470737 ABHD11Q8NFV4 315 aa12.98□□□□□ -0.33
SEMA3F-208ENST00000470737 ATL1Q8WXF7 558 aa12.98□□□□□ -0.33
SEMA3F-208ENST00000470737 LINGO1Q96FE5 620 aa12.98□□□□□ -0.33
SEMA3F-208ENST00000470737 SNF8Q96H20 258 aa12.98□□□□□ -0.33
SEMA3F-208ENST00000470737 NDNQ99608 321 aa12.98□□□□□ -0.33
SEMA3F-208ENST00000470737 SARGQ9BW04 601 aa12.98□□□□□ -0.33
SEMA3F-208ENST00000470737 TP63Q9H3D4 680 aaPredicted RBP12.98□□□□□ -0.33
SEMA3F-208ENST00000470737 TRIM45Q9H8W5 580 aaPredicted RBP12.98□□□□□ -0.33
SEMA3F-208ENST00000470737 CLK4Q9HAZ1 481 aaKnown RBP12.98□□□□□ -0.33
SEMA3F-208ENST00000470737 PRDM9Q9NQV7 894 aa12.98□□□□□ -0.33
SEMA3F-208ENST00000470737 ZFHX3Q15911 3703 aa12.98□□□□□ -0.33
SEMA3F-208ENST00000470737 SETD2Q9BYW2 2564 aaPredicted RBP12.97□□□□□ -0.33
SEMA3F-208ENST00000470737 A8MUA0 341 aa12.97□□□□□ -0.33
SEMA3F-208ENST00000470737 CCDC188H7C350 402 aa12.97□□□□□ -0.33
SEMA3F-208ENST00000470737 PEX1O43933 1283 aa12.97□□□□□ -0.33
SEMA3F-208ENST00000470737 HS6ST1O60243 411 aa12.97□□□□□ -0.33
SEMA3F-208ENST00000470737 KRT38O76015 456 aa12.97□□□□□ -0.33
SEMA3F-208ENST00000470737 CD1EP15812 388 aa12.97□□□□□ -0.33
SEMA3F-208ENST00000470737 CHRNB4P30926 498 aa12.97□□□□□ -0.33
SEMA3F-208ENST00000470737 CLCN2P51788 898 aa12.97□□□□□ -0.33
SEMA3F-208ENST00000470737 AP1S2P56377 157 aa12.97□□□□□ -0.33
SEMA3F-208ENST00000470737 PAOXQ6QHF9 649 aa12.97□□□□□ -0.33
SEMA3F-208ENST00000470737 PAQR3Q6TCH7 311 aa12.97□□□□□ -0.33
SEMA3F-208ENST00000470737 SYDE1Q6ZW31 735 aaPredicted RBP12.97□□□□□ -0.33
SEMA3F-208ENST00000470737 STRA8Q7Z7C7 330 aa12.97□□□□□ -0.33
SEMA3F-208ENST00000470737 SULF2Q8IWU5 870 aa12.97□□□□□ -0.33
SEMA3F-208ENST00000470737 CHERPQ8IWX8 916 aaKnown RBP12.97□□□□□ -0.33
SEMA3F-208ENST00000470737 CYP4Z2PQ8N1L4 340 aa12.97□□□□□ -0.33
SEMA3F-208ENST00000470737 OR4K1Q8NGD4 311 aa12.97□□□□□ -0.33
SEMA3F-208ENST00000470737 NT5CQ8TCD5 201 aa12.97□□□□□ -0.33
SEMA3F-208ENST00000470737 PYCR2Q96C36 320 aa12.97□□□□□ -0.33
SEMA3F-208ENST00000470737 RHBGQ9H310 441 aa12.97□□□□□ -0.33
SEMA3F-208ENST00000470737 ZFP69BQ9UJL9 534 aa12.97□□□□□ -0.33
SEMA3F-208ENST00000470737 FBXW2Q9UKT8 454 aa12.97□□□□□ -0.33
SEMA3F-208ENST00000470737 DYRK1BQ9Y463 629 aa12.97□□□□□ -0.33
SEMA3F-208ENST00000470737 HCFC1P51610 2035 aa12.96□□□□□ -0.33
SEMA3F-208ENST00000470737 TRBV11-1A0A0K0K1C0 115 aa12.96□□□□□ -0.33
SEMA3F-208ENST00000470737 TCRBV16S1A1N1A0A5B0 115 aa12.96□□□□□ -0.33
SEMA3F-208ENST00000470737 FAM90A27PA6NNH2 459 aa12.96□□□□□ -0.33
SEMA3F-208ENST00000470737 B3GALT4O96024 378 aa12.96□□□□□ -0.33
SEMA3F-208ENST00000470737 TFEBP19484 476 aa12.96□□□□□ -0.33
SEMA3F-208ENST00000470737 MAOAP21397 527 aa12.96□□□□□ -0.33
SEMA3F-208ENST00000470737 AHRP35869 848 aa12.96□□□□□ -0.33
SEMA3F-208ENST00000470737 RFC3P40938 356 aa12.96□□□□□ -0.33
SEMA3F-208ENST00000470737 HNF4AP41235 474 aa12.96□□□□□ -0.33
SEMA3F-208ENST00000470737 PAFAH1B1P43034 410 aa12.96□□□□□ -0.33
SEMA3F-208ENST00000470737 SCTRP47872 440 aa12.96□□□□□ -0.33
SEMA3F-208ENST00000470737 IL2P60568 153 aa12.96□□□□□ -0.33
SEMA3F-208ENST00000470737 BTG2P78543 158 aa12.96□□□□□ -0.33
SEMA3F-208ENST00000470737 PDAP1Q13442 181 aaKnown RBP12.96□□□□□ -0.33
SEMA3F-208ENST00000470737 PHKG1Q16816 387 aa12.96□□□□□ -0.33
SEMA3F-208ENST00000470737 ARHGAP11AQ6P4F7 1023 aa12.96□□□□□ -0.33
SEMA3F-208ENST00000470737 FGD2Q7Z6J4 655 aa12.96□□□□□ -0.33
SEMA3F-208ENST00000470737 ZNF227Q86WZ6 799 aa12.96□□□□□ -0.33
SEMA3F-208ENST00000470737 GPATCH11Q8N954 259 aa12.96□□□□□ -0.33
SEMA3F-208ENST00000470737 ACBD4Q8NC06 268 aa12.96□□□□□ -0.33
SEMA3F-208ENST00000470737 C2CD4AQ8NCU7 369 aaPredicted RBP12.96□□□□□ -0.33
SEMA3F-208ENST00000470737 TRPV3Q8NET8 790 aa12.96□□□□□ -0.33
SEMA3F-208ENST00000470737 OR56A3Q8NH54 315 aa12.96□□□□□ -0.33
SEMA3F-208ENST00000470737 SLC5A11Q8WWX8 675 aa12.96□□□□□ -0.33
SEMA3F-208ENST00000470737 RND1Q92730 232 aa12.96□□□□□ -0.33
SEMA3F-208ENST00000470737 TREX2Q9BQ50 279 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms