RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 AMER3Q8N944 861 aa13.71□□□□□ -0.21
DNMT3A-208ENST00000466601 FKBP10Q96AY3 582 aa13.71□□□□□ -0.21
DNMT3A-208ENST00000466601 SLC45A3Q96JT2 553 aa13.71□□□□□ -0.21
DNMT3A-208ENST00000466601 FRG2BQ96QU4 278 aa13.71□□□□□ -0.21
DNMT3A-208ENST00000466601 TRMOQ9BU70 441 aa13.71□□□□□ -0.21
DNMT3A-208ENST00000466601 YIPF2Q9BWQ6 316 aa13.71□□□□□ -0.21
DNMT3A-208ENST00000466601 SLC29A3Q9BZD2 475 aa13.71□□□□□ -0.21
DNMT3A-208ENST00000466601 ACBD3Q9H3P7 528 aa13.71□□□□□ -0.21
DNMT3A-208ENST00000466601 ELOVL6Q9H5J4 265 aa13.71□□□□□ -0.21
DNMT3A-208ENST00000466601 DMRT3Q9NQL9 472 aa13.71□□□□□ -0.21
DNMT3A-208ENST00000466601 PSD3Q9NYI0 1048 aa13.71□□□□□ -0.21
DNMT3A-208ENST00000466601 MRPS18BQ9Y676 258 aaKnown RBP13.71□□□□□ -0.21
DNMT3A-208ENST00000466601 FREM2Q5SZK8 3169 aa13.71□□□□□ -0.21
DNMT3A-208ENST00000466601 ACACAQ13085 2346 aa13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 FER1L5A0AVI2 2057 aa13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 ASPMQ8IZT6 3477 aa13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 C4orf51C9J302 202 aa13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 FOXE1O00358 373 aaPredicted RBP13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 NPHS1O60500 1241 aa13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 SH3BGRLO75368 114 aa13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 RDH16O75452 317 aa13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 ENO1P06733 434 aaKnown RBP13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 PTX3P26022 381 aaPredicted RBP13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 HMOX2P30519 316 aa13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 PLA2G16P53816 162 aa13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 UCNP55089 124 aa13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 RPS18P62269 152 aaKnown RBP13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 SKP1P63208 163 aa13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 BTN3A2P78410 334 aa13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 MAT1AQ00266 395 aaKnown RBP13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 TGM3Q08188 693 aa13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 SYT16Q17RD7 645 aa13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 TMEM35AQ53FP2 167 aa13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 SGO1Q5FBB7 561 aa13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 C10orf62Q5T681 223 aaPredicted RBP13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 DEPDC1Q5TB30 811 aa13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 HHATQ5VTY9 493 aa13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 KHDRBS2Q5VWX1 349 aaKnown RBP13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 FAM219BQ5XKK7 198 aa13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 TRIM40Q6P9F5 258 aa13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 ZCCHC23Q6ZST2 131 aa13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 SRFBP1Q8NEF9 429 aaKnown RBP13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 OR2L5Q8NG80 312 aa13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 PPP1R14CQ8TAE6 165 aa13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 METTL6Q8TCB7 284 aa13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 SELENOMQ8WWX9 145 aa13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 STARD8Q92502 1023 aa13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 FAR2Q96K12 515 aa13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 PAIP2Q9BPZ3 127 aaKnown RBP13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 SHCBP1LQ9BZQ2 653 aa13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 SLC26A1Q9H2B4 701 aa13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 OR51B5Q9H339 312 aa13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 ACTL8Q9H568 366 aa13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 MLXIPLQ9NP71 852 aa13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 FARSBQ9NSD9 589 aaKnown RBP13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 NKIRAS1Q9NYS0 192 aa13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 TRPC4Q9UBN4 977 aa13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 CTSFQ9UBX1 484 aa13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 ZNF282Q9UDV7 671 aaPredicted RBP13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 TCFL5Q9UL49 500 aa13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 PADI2Q9Y2J8 665 aa13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 MAP4K5Q9Y4K4 846 aa13.7□□□□□ -0.22
DNMT3A-208ENST00000466601 IGLV3-12A0A075B6K2 115 aa13.69□□□□□ -0.22
DNMT3A-208ENST00000466601 A0A088AWK7 358 aa13.69□□□□□ -0.22
DNMT3A-208ENST00000466601 A0A0G2JN53 185 aa13.69□□□□□ -0.22
DNMT3A-208ENST00000466601 ZNF860A6NHJ4 632 aa13.69□□□□□ -0.22
DNMT3A-208ENST00000466601 HMGB1P1B2RPK0 211 aaPredicted RBP13.69□□□□□ -0.22
DNMT3A-208ENST00000466601 MANBAO00462 879 aa13.69□□□□□ -0.22
DNMT3A-208ENST00000466601 CNOT3O75175 753 aaKnown RBP13.69□□□□□ -0.22
DNMT3A-208ENST00000466601 CREG1O75629 220 aa13.69□□□□□ -0.22
DNMT3A-208ENST00000466601 PDYNP01213 254 aa13.69□□□□□ -0.22
DNMT3A-208ENST00000466601 KRT6AP02538 564 aa13.69□□□□□ -0.22
DNMT3A-208ENST00000466601 KRT6BP04259 564 aa13.69□□□□□ -0.22
DNMT3A-208ENST00000466601 NEFHP12036 1026 aa13.69□□□□□ -0.22
DNMT3A-208ENST00000466601 ZNF10P21506 573 aaPredicted RBP13.69□□□□□ -0.22
DNMT3A-208ENST00000466601 SERPINB5P36952 375 aa13.69□□□□□ -0.22
DNMT3A-208ENST00000466601 KRT6CP48668 564 aa13.69□□□□□ -0.22
DNMT3A-208ENST00000466601 WDR4P57081 412 aaKnown RBP13.69□□□□□ -0.22
DNMT3A-208ENST00000466601 TMPRSS3P57727 454 aa13.69□□□□□ -0.22
DNMT3A-208ENST00000466601 OCA2Q04671 838 aa13.69□□□□□ -0.22
DNMT3A-208ENST00000466601 RCN2Q14257 317 aa13.69□□□□□ -0.22
DNMT3A-208ENST00000466601 NKG7Q16617 165 aa13.69□□□□□ -0.22
DNMT3A-208ENST00000466601 ABHD17CQ6PCB6 329 aa13.69□□□□□ -0.22
DNMT3A-208ENST00000466601 UBE3DQ7Z6J8 389 aa13.69□□□□□ -0.22
DNMT3A-208ENST00000466601 ZSCAN1Q8NBB4 408 aa13.69□□□□□ -0.22
DNMT3A-208ENST00000466601 OR6Y1Q8NGX8 325 aa13.69□□□□□ -0.22
DNMT3A-208ENST00000466601 STT3BQ8TCJ2 826 aa13.69□□□□□ -0.22
DNMT3A-208ENST00000466601 MGARPQ8TDB4 240 aa13.69□□□□□ -0.22
DNMT3A-208ENST00000466601 QRFPRQ96P65 431 aa13.69□□□□□ -0.22
DNMT3A-208ENST00000466601 KCNA7Q96RP8 456 aa13.69□□□□□ -0.22
DNMT3A-208ENST00000466601 SERPINI1Q99574 410 aa13.69□□□□□ -0.22
DNMT3A-208ENST00000466601 CENPKQ9BS16 269 aa13.69□□□□□ -0.22
DNMT3A-208ENST00000466601 CLK4Q9HAZ1 481 aaKnown RBP13.69□□□□□ -0.22
DNMT3A-208ENST00000466601 MKKSQ9NPJ1 570 aaPredicted RBP13.69□□□□□ -0.22
DNMT3A-208ENST00000466601 HCN3Q9P1Z3 774 aa13.69□□□□□ -0.22
DNMT3A-208ENST00000466601 NXT1Q9UKK6 140 aaKnown RBP13.69□□□□□ -0.22
DNMT3A-208ENST00000466601 PPT2Q9UMR5 302 aa13.69□□□□□ -0.22
DNMT3A-208ENST00000466601 PTRH2Q9Y3E5 179 aaKnown RBP13.69□□□□□ -0.22
DNMT3A-208ENST00000466601 TIMM22Q9Y584 194 aa13.69□□□□□ -0.22
DNMT3A-208ENST00000466601 SCN3AQ9NY46 2000 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms