RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 TCTN2Q96GX1 697 aa10.46□□□□□ -0.74
SCN9A-205ENST00000454569 SLC41A2Q96JW4 573 aa10.46□□□□□ -0.74
SCN9A-205ENST00000454569 CCDC74BQ96LY2 380 aa10.46□□□□□ -0.74
SCN9A-205ENST00000454569 TEFMQ96QE5 360 aaKnown RBP10.46□□□□□ -0.74
SCN9A-205ENST00000454569 PITHD1Q9GZP4 211 aaPredicted RBP10.46□□□□□ -0.74
SCN9A-205ENST00000454569 SOHLH2Q9NX45 425 aa10.46□□□□□ -0.74
SCN9A-205ENST00000454569 GPR45Q9Y5Y3 372 aa10.46□□□□□ -0.74
SCN9A-205ENST00000454569 ARHGAP10A1A4S6 786 aa10.45□□□□□ -0.74
SCN9A-205ENST00000454569 CCT8L1PA6NM43 557 aa10.45□□□□□ -0.74
SCN9A-205ENST00000454569 D6RAR5 112 aa10.45□□□□□ -0.74
SCN9A-205ENST00000454569 ANKRD28O15084 1053 aa10.45□□□□□ -0.74
SCN9A-205ENST00000454569 SMIM10L1P0DMW3 83 aa10.45□□□□□ -0.74
SCN9A-205ENST00000454569 BCKDHAP12694 445 aa10.45□□□□□ -0.74
SCN9A-205ENST00000454569 HSD3B1P14060 373 aa10.45□□□□□ -0.74
SCN9A-205ENST00000454569 NELFEP18615 380 aaKnown RBP10.45□□□□□ -0.74
SCN9A-205ENST00000454569 GPX3P22352 226 aa10.45□□□□□ -0.74
SCN9A-205ENST00000454569 PTX3P26022 381 aaPredicted RBP10.45□□□□□ -0.74
SCN9A-205ENST00000454569 HSD3B2P26439 372 aa10.45□□□□□ -0.74
SCN9A-205ENST00000454569 TPP2P29144 1249 aaPredicted RBP10.45□□□□□ -0.74
SCN9A-205ENST00000454569 IL12AP29459 219 aa10.45□□□□□ -0.74
SCN9A-205ENST00000454569 PLA2G16P53816 162 aa10.45□□□□□ -0.74
SCN9A-205ENST00000454569 HNRNPH2P55795 449 aaKnown RBP10.45□□□□□ -0.74
SCN9A-205ENST00000454569 UFM1P61960 85 aa10.45□□□□□ -0.74
SCN9A-205ENST00000454569 ERVK-8P63133 956 aa10.45□□□□□ -0.74
SCN9A-205ENST00000454569 RELAQ04206 551 aa10.45□□□□□ -0.74
SCN9A-205ENST00000454569 EMX2Q04743 252 aa10.45□□□□□ -0.74
SCN9A-205ENST00000454569 CUL3Q13618 768 aa10.45□□□□□ -0.74
SCN9A-205ENST00000454569 PTGR1Q14914 329 aa10.45□□□□□ -0.74
SCN9A-205ENST00000454569 C16orf72Q14CZ0 275 aa10.45□□□□□ -0.74
SCN9A-205ENST00000454569 INAVAQ3KP66 663 aa10.45□□□□□ -0.74
SCN9A-205ENST00000454569 WASHC2DQ5SRD0 308 aa10.45□□□□□ -0.74
SCN9A-205ENST00000454569 OGFOD2Q6N063 350 aa10.45□□□□□ -0.74
SCN9A-205ENST00000454569 NOXRED1Q6NXP6 359 aa10.45□□□□□ -0.74
SCN9A-205ENST00000454569 PAOXQ6QHF9 649 aa10.45□□□□□ -0.74
SCN9A-205ENST00000454569 CCDC121Q6ZUS5 278 aa10.45□□□□□ -0.74
SCN9A-205ENST00000454569 COMMD6Q7Z4G1 85 aa10.45□□□□□ -0.74
SCN9A-205ENST00000454569 FUNDC1Q8IVP5 155 aa10.45□□□□□ -0.74
SCN9A-205ENST00000454569 MMP21Q8N119 569 aa10.45□□□□□ -0.74
SCN9A-205ENST00000454569 METTL4Q8N3J2 472 aa10.45□□□□□ -0.74
SCN9A-205ENST00000454569 D2HGDHQ8N465 521 aa10.45□□□□□ -0.74
SCN9A-205ENST00000454569 OR4D9Q8NGE8 314 aa10.45□□□□□ -0.74
SCN9A-205ENST00000454569 ZCCHC10Q8TBK6 192 aa10.45□□□□□ -0.74
SCN9A-205ENST00000454569 NT5CQ8TCD5 201 aa10.45□□□□□ -0.74
SCN9A-205ENST00000454569 UTP15Q8TED0 518 aaKnown RBP10.45□□□□□ -0.74
SCN9A-205ENST00000454569 STON2Q8WXE9 905 aa10.45□□□□□ -0.74
SCN9A-205ENST00000454569 SMIM10Q96HG1 83 aa10.45□□□□□ -0.74
SCN9A-205ENST00000454569 FCRL1Q96LA6 429 aa10.45□□□□□ -0.74
SCN9A-205ENST00000454569 PPP3R2Q96LZ3 170 aa10.45□□□□□ -0.74
SCN9A-205ENST00000454569 GFM1Q96RP9 751 aaKnown RBP10.45□□□□□ -0.74
SCN9A-205ENST00000454569 CD180Q99467 661 aa10.45□□□□□ -0.74
SCN9A-205ENST00000454569 CCDC106Q9BWC9 280 aa10.45□□□□□ -0.74
SCN9A-205ENST00000454569 ZNF768Q9H5H4 540 aaKnown RBP10.45□□□□□ -0.74
SCN9A-205ENST00000454569 PDE7BQ9NP56 450 aa10.45□□□□□ -0.74
SCN9A-205ENST00000454569 PRDM7Q9NQW5 492 aa10.45□□□□□ -0.74
SCN9A-205ENST00000454569 RIC8BQ9NVN3 520 aa10.45□□□□□ -0.74
SCN9A-205ENST00000454569 AIG1Q9NVV5 245 aa10.45□□□□□ -0.74
SCN9A-205ENST00000454569 OCIAD1Q9NX40 245 aa10.45□□□□□ -0.74
SCN9A-205ENST00000454569 EXO1Q9UQ84 846 aaKnown RBP10.45□□□□□ -0.74
SCN9A-205ENST00000454569 RUVBL1Q9Y265 456 aaKnown RBP10.45□□□□□ -0.74
SCN9A-205ENST00000454569 DCHS1Q96JQ0 3298 aa10.44□□□□□ -0.74
SCN9A-205ENST00000454569 PMS2P1A4D2B8 440 aa10.44□□□□□ -0.74
SCN9A-205ENST00000454569 KLK1P06870 262 aa10.44□□□□□ -0.74
SCN9A-205ENST00000454569 GP1BAP07359 652 aa10.44□□□□□ -0.74
SCN9A-205ENST00000454569 SERPINA6P08185 405 aa10.44□□□□□ -0.74
SCN9A-205ENST00000454569 ZNF888P0CJ79 500 aaPredicted RBP10.44□□□□□ -0.74
SCN9A-205ENST00000454569 SDC1P18827 310 aa10.44□□□□□ -0.74
SCN9A-205ENST00000454569 HSD11B2P80365 405 aa10.44□□□□□ -0.74
SCN9A-205ENST00000454569 INSM1Q01101 510 aaPredicted RBP10.44□□□□□ -0.74
SCN9A-205ENST00000454569 ZNF33BQ06732 778 aa10.44□□□□□ -0.74
SCN9A-205ENST00000454569 ZFP36L1Q07352 338 aaKnown RBP10.44□□□□□ -0.74
SCN9A-205ENST00000454569 PRSS53Q2L4Q9 553 aa10.44□□□□□ -0.74
SCN9A-205ENST00000454569 PRTGQ2VWP7 1150 aa10.44□□□□□ -0.74
SCN9A-205ENST00000454569 ABHD17CQ6PCB6 329 aa10.44□□□□□ -0.74
SCN9A-205ENST00000454569 YTHDF3Q7Z739 585 aaKnown RBP10.44□□□□□ -0.74
SCN9A-205ENST00000454569 CLNKQ7Z7G1 428 aa10.44□□□□□ -0.74
SCN9A-205ENST00000454569 PDSS2Q86YH6 399 aa10.44□□□□□ -0.74
SCN9A-205ENST00000454569 KIAA2013Q8IYS2 634 aa10.44□□□□□ -0.74
SCN9A-205ENST00000454569 LIX1Q8N485 282 aa10.44□□□□□ -0.74
SCN9A-205ENST00000454569 CPSF7Q8N684 471 aaKnown RBP10.44□□□□□ -0.74
SCN9A-205ENST00000454569 KRTCAP2Q8N6L1 136 aa10.44□□□□□ -0.74
SCN9A-205ENST00000454569 TRPV3Q8NET8 790 aa10.44□□□□□ -0.74
SCN9A-205ENST00000454569 OR8K5Q8NH50 307 aa10.44□□□□□ -0.74
SCN9A-205ENST00000454569 OR1L3Q8NH93 324 aa10.44□□□□□ -0.74
SCN9A-205ENST00000454569 ERP27Q96DN0 273 aa10.44□□□□□ -0.74
SCN9A-205ENST00000454569 ZNF285Q96NJ3 590 aa10.44□□□□□ -0.74
SCN9A-205ENST00000454569 LRRC37BQ96QE4 947 aa10.44□□□□□ -0.74
SCN9A-205ENST00000454569 SERPINI1Q99574 410 aa10.44□□□□□ -0.74
SCN9A-205ENST00000454569 CCT7Q99832 543 aa10.44□□□□□ -0.74
SCN9A-205ENST00000454569 C17orf62Q9BQA9 187 aa10.44□□□□□ -0.74
SCN9A-205ENST00000454569 REXO4Q9GZR2 422 aaKnown RBP10.44□□□□□ -0.74
SCN9A-205ENST00000454569 ARL8BQ9NVJ2 186 aa10.44□□□□□ -0.74
SCN9A-205ENST00000454569 PPT2Q9UMR5 302 aa10.44□□□□□ -0.74
SCN9A-205ENST00000454569 SPAARA0A1B0GVQ0 90 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 WASHC1A8K0Z3 465 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 CAPN14A8MX76 684 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 TM4SF5O14894 197 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 ERI3O43414 337 aaKnown RBP10.43□□□□□ -0.74
SCN9A-205ENST00000454569 TMPRSS11DO60235 418 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 VPS4BO75351 444 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 T-ENOLP0DO92 83 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms