RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 ABHD13Q7L211 337 aa15.19■□□□□ 0.02
SCAMP4-205ENST00000452128 KRT78Q8N1N4 520 aa15.19■□□□□ 0.02
SCAMP4-205ENST00000452128 SNX31Q8N9S9 440 aa15.19■□□□□ 0.02
SCAMP4-205ENST00000452128 ZNF473Q8WTR7 871 aaKnown RBP15.19■□□□□ 0.02
SCAMP4-205ENST00000452128 EXT2Q93063 718 aa15.19■□□□□ 0.02
SCAMP4-205ENST00000452128 YIPF2Q9BWQ6 316 aa15.19■□□□□ 0.02
SCAMP4-205ENST00000452128 PRDM7Q9NQW5 492 aa15.19■□□□□ 0.02
SCAMP4-205ENST00000452128 EXOC1LA0A1B0GW35 172 aa15.18■□□□□ 0.02
SCAMP4-205ENST00000452128 SIX3O95343 332 aaPredicted RBP15.18■□□□□ 0.02
SCAMP4-205ENST00000452128 SERPIND1P05546 499 aa15.18■□□□□ 0.02
SCAMP4-205ENST00000452128 RBP1P09455 135 aa15.18■□□□□ 0.02
SCAMP4-205ENST00000452128 SOX11P35716 441 aa15.18■□□□□ 0.02
SCAMP4-205ENST00000452128 HNF4AP41235 474 aa15.18■□□□□ 0.02
SCAMP4-205ENST00000452128 IRF8Q02556 426 aa15.18■□□□□ 0.02
SCAMP4-205ENST00000452128 LAPTM5Q13571 262 aa15.18■□□□□ 0.02
SCAMP4-205ENST00000452128 TOR1AIP1Q5JTV8 583 aa15.18■□□□□ 0.02
SCAMP4-205ENST00000452128 ABHD17CQ6PCB6 329 aa15.18■□□□□ 0.02
SCAMP4-205ENST00000452128 LANCL3Q6ZV70 420 aa15.18■□□□□ 0.02
SCAMP4-205ENST00000452128 ANKRD37Q7Z713 158 aa15.18■□□□□ 0.02
SCAMP4-205ENST00000452128 PARP9Q8IXQ6 854 aa15.18■□□□□ 0.02
SCAMP4-205ENST00000452128 L3MBTL4Q8NA19 623 aa15.18■□□□□ 0.02
SCAMP4-205ENST00000452128 OR7G3Q8NG95 312 aa15.18■□□□□ 0.02
SCAMP4-205ENST00000452128 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.18■□□□□ 0.023e-6■■■■■ 50.8
SCAMP4-205ENST00000452128 GAL3ST3Q96A11 431 aa15.18■□□□□ 0.02
SCAMP4-205ENST00000452128 TBC1D20Q96BZ9 403 aa15.18■□□□□ 0.02
SCAMP4-205ENST00000452128 PEX11GQ96HA9 241 aa15.18■□□□□ 0.02
SCAMP4-205ENST00000452128 LHPPQ9H008 270 aa15.18■□□□□ 0.02
SCAMP4-205ENST00000452128 ZNF160Q9HCG1 818 aa15.18■□□□□ 0.02
SCAMP4-205ENST00000452128 KCMF1Q9P0J7 381 aa15.18■□□□□ 0.02
SCAMP4-205ENST00000452128 OPTCQ9UBM4 332 aa15.18■□□□□ 0.02
SCAMP4-205ENST00000452128 HEMK1Q9Y5R4 338 aaPredicted RBP15.18■□□□□ 0.02
SCAMP4-205ENST00000452128 FLNCQ14315 2725 aa15.17■□□□□ 0.02
SCAMP4-205ENST00000452128 IGKV3D-11A0A0A0MRZ8 115 aa15.17■□□□□ 0.02
SCAMP4-205ENST00000452128 URADA6NGE7 173 aa15.17■□□□□ 0.02
SCAMP4-205ENST00000452128 MAGEB17A8MXT2 336 aa15.17■□□□□ 0.02
SCAMP4-205ENST00000452128 S100BP04271 92 aaPredicted RBP15.17■□□□□ 0.02
SCAMP4-205ENST00000452128 SHBGP04278 402 aa15.17■□□□□ 0.02
SCAMP4-205ENST00000452128 SERPINA7P05543 415 aa15.17■□□□□ 0.02
SCAMP4-205ENST00000452128 FHP07954 510 aa15.17■□□□□ 0.02
SCAMP4-205ENST00000452128 PRR35P0CG20 571 aa15.17■□□□□ 0.02
SCAMP4-205ENST00000452128 C8orf89P0DMQ9 161 aa15.17■□□□□ 0.02
SCAMP4-205ENST00000452128 STXBP1P61764 594 aaKnown RBP15.17■□□□□ 0.02
SCAMP4-205ENST00000452128 OLR1P78380 273 aa15.17■□□□□ 0.02
SCAMP4-205ENST00000452128 TLE1Q04724 770 aa15.17■□□□□ 0.02
SCAMP4-205ENST00000452128 TEX35Q5T0J7 233 aa15.17■□□□□ 0.02
SCAMP4-205ENST00000452128 FAAH2Q6GMR7 532 aa15.17■□□□□ 0.02
SCAMP4-205ENST00000452128 JMJD6Q6NYC1 403 aaPredicted RBP15.17■□□□□ 0.02
SCAMP4-205ENST00000452128 PRICKLE2Q7Z3G6 844 aa15.17■□□□□ 0.02
SCAMP4-205ENST00000452128 CPEB2Q7Z5Q1 589 aaKnown RBP15.17■□□□□ 0.02
SCAMP4-205ENST00000452128 CA13Q8N1Q1 262 aa15.17■□□□□ 0.02
SCAMP4-205ENST00000452128 TEX9Q8N6V9 391 aa15.17■□□□□ 0.02
SCAMP4-205ENST00000452128 TEX19Q8NA77 164 aa15.17■□□□□ 0.02
SCAMP4-205ENST00000452128 OR2L5Q8NG80 312 aa15.17■□□□□ 0.02
SCAMP4-205ENST00000452128 MTBPQ96DY7 904 aa15.17■□□□□ 0.02
SCAMP4-205ENST00000452128 VPS50Q96JG6 964 aa15.17■□□□□ 0.02
SCAMP4-205ENST00000452128 MRPL57Q9BQC6 102 aaKnown RBP15.17■□□□□ 0.02
SCAMP4-205ENST00000452128 C1QTNF3Q9BXJ4 246 aa15.17■□□□□ 0.02
SCAMP4-205ENST00000452128 MS4A8Q9BY19 250 aa15.17■□□□□ 0.02
SCAMP4-205ENST00000452128 ZBTB26Q9HCK0 441 aa15.17■□□□□ 0.02
SCAMP4-205ENST00000452128 IKBKGQ9Y6K9 419 aa15.17■□□□□ 0.02
SCAMP4-205ENST00000452128 NUP210LQ5VU65 1888 aa15.16■□□□□ 0.02
SCAMP4-205ENST00000452128 FAM227AF5H4B4 570 aa15.16■□□□□ 0.02
SCAMP4-205ENST00000452128 STX16-NPEPL1H3BU86 382 aa15.16■□□□□ 0.02
SCAMP4-205ENST00000452128 CYR61O00622 381 aa15.16■□□□□ 0.02
SCAMP4-205ENST00000452128 OR7A17O14581 309 aa15.16■□□□□ 0.02
SCAMP4-205ENST00000452128 STX16O14662 325 aa15.16■□□□□ 0.02
SCAMP4-205ENST00000452128 UGDHO60701 494 aa15.16■□□□□ 0.02
SCAMP4-205ENST00000452128 CELA2AP08217 269 aa15.16■□□□□ 0.02
SCAMP4-205ENST00000452128 EPB42P16452 691 aa15.16■□□□□ 0.02
SCAMP4-205ENST00000452128 BTN3A2P78410 334 aa15.16■□□□□ 0.02
SCAMP4-205ENST00000452128 FOXK1P85037 733 aa15.16■□□□□ 0.02
SCAMP4-205ENST00000452128 EEF1A2Q05639 463 aaKnown RBP15.16■□□□□ 0.02
SCAMP4-205ENST00000452128 RASA2Q15283 850 aa15.16■□□□□ 0.02
SCAMP4-205ENST00000452128 TSNAXIP1Q2TAA8 658 aa15.16■□□□□ 0.02
SCAMP4-205ENST00000452128 PLEKHN1Q494U1 663 aaPredicted RBP15.16■□□□□ 0.02
SCAMP4-205ENST00000452128 PAGE2BQ5JRK9 111 aa15.16■□□□□ 0.02
SCAMP4-205ENST00000452128 LIPJQ5W064 366 aa15.16■□□□□ 0.02
SCAMP4-205ENST00000452128 SLC6A19Q695T7 634 aa15.16■□□□□ 0.02
SCAMP4-205ENST00000452128 GRHL2Q6ISB3 625 aa15.16■□□□□ 0.02
SCAMP4-205ENST00000452128 H3F3CQ6NXT2 135 aa15.16■□□□□ 0.02
SCAMP4-205ENST00000452128 KLC3Q6P597 504 aa15.16■□□□□ 0.02
SCAMP4-205ENST00000452128 RIPOR1Q6ZS17 1223 aa15.16■□□□□ 0.02
SCAMP4-205ENST00000452128 Q6ZS92 163 aa15.16■□□□□ 0.02
SCAMP4-205ENST00000452128 TAOK1Q7L7X3 1001 aa15.16■□□□□ 0.02
SCAMP4-205ENST00000452128 GOLGA7Q7Z5G4 137 aa15.16■□□□□ 0.02
SCAMP4-205ENST00000452128 TDRPQ86YL5 185 aa15.16■□□□□ 0.02
SCAMP4-205ENST00000452128 TSLPQ969D9 159 aa15.16■□□□□ 0.02
SCAMP4-205ENST00000452128 F2RL3Q96RI0 385 aa15.16■□□□□ 0.02
SCAMP4-205ENST00000452128 LMF1Q96S06 567 aa15.16■□□□□ 0.02
SCAMP4-205ENST00000452128 NPLQ9BXD5 320 aaPredicted RBP15.16■□□□□ 0.02
SCAMP4-205ENST00000452128 XPR1Q9UBH6 696 aa15.16■□□□□ 0.02
SCAMP4-205ENST00000452128 TNPO3Q9Y5L0 923 aaKnown RBP15.16■□□□□ 0.02
SCAMP4-205ENST00000452128 RP1L1Q8IWN7 2480 aaPredicted RBP15.16■□□□□ 0.02
SCAMP4-205ENST00000452128 NSG1A0A0A6YYJ2 146 aa15.15■□□□□ 0.02
SCAMP4-205ENST00000452128 IGHV3-20A0A0C4DH32 117 aa15.15■□□□□ 0.02
SCAMP4-205ENST00000452128 A0A1B0GTL3 188 aa15.15■□□□□ 0.02
SCAMP4-205ENST00000452128 ANKDD1BA6NHY2 528 aa15.15■□□□□ 0.02
SCAMP4-205ENST00000452128 H0YIV9 168 aa15.15■□□□□ 0.02
SCAMP4-205ENST00000452128 PYCARD-AS1I3L0S3 204 aa15.15■□□□□ 0.02
SCAMP4-205ENST00000452128 ERI3O43414 337 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms