RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 NPDC1Q9NQX5 325 aaPredicted RBP22.79■■□□□ 1.24
PMS1-214ENST00000446877 TNFRSF10DQ9UBN6 386 aa22.79■■□□□ 1.24
PMS1-214ENST00000446877 FBXO5Q9UKT4 447 aa22.79■■□□□ 1.24
PMS1-214ENST00000446877 SCN3AQ9NY46 2000 aa22.79■■□□□ 1.24
PMS1-214ENST00000446877 A8MUA0 341 aa22.78■■□□□ 1.24
PMS1-214ENST00000446877 SLC16A5O15375 505 aa22.78■■□□□ 1.24
PMS1-214ENST00000446877 HAUS5O94927 633 aa22.78■■□□□ 1.24
PMS1-214ENST00000446877 ZNF888P0CJ79 500 aaPredicted RBP22.78■■□□□ 1.24
PMS1-214ENST00000446877 MLNP12872 115 aa22.78■■□□□ 1.24
PMS1-214ENST00000446877 MAGEA6P43360 314 aa22.78■■□□□ 1.24
PMS1-214ENST00000446877 PAOXQ6QHF9 649 aa22.78■■□□□ 1.24
PMS1-214ENST00000446877 CYP4Z2PQ8N1L4 340 aa22.78■■□□□ 1.24
PMS1-214ENST00000446877 SNF8Q96H20 258 aa22.78■■□□□ 1.24
PMS1-214ENST00000446877 CLK4Q9HAZ1 481 aaKnown RBP22.78■■□□□ 1.24
PMS1-214ENST00000446877 SLC24A3Q9HC58 644 aa22.78■■□□□ 1.24
PMS1-214ENST00000446877 XAB2Q9HCS7 855 aaKnown RBP22.78■■□□□ 1.24
PMS1-214ENST00000446877 PRDM9Q9NQV7 894 aa22.78■■□□□ 1.24
PMS1-214ENST00000446877 HRH3Q9Y5N1 445 aa22.78■■□□□ 1.24
PMS1-214ENST00000446877 NIPBLQ6KC79 2804 aaeCLIP22.77■■□□□ 1.24
PMS1-214ENST00000446877 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP22.77■■□□□ 1.24
PMS1-214ENST00000446877 ZCWPW2A0A1B0GU75 182 aa22.77■■□□□ 1.24
PMS1-214ENST00000446877 TRBC2A0A5B9 178 aa22.77■■□□□ 1.24
PMS1-214ENST00000446877 PDE9AO76083 593 aa22.77■■□□□ 1.24
PMS1-214ENST00000446877 TOXO94900 526 aa22.77■■□□□ 1.24
PMS1-214ENST00000446877 B3GALT4O96024 378 aa22.77■■□□□ 1.24
PMS1-214ENST00000446877 MAOAP21397 527 aa22.77■■□□□ 1.24
PMS1-214ENST00000446877 CLCN2P51788 898 aa22.77■■□□□ 1.24
PMS1-214ENST00000446877 ACAD11Q709F0 780 aa22.77■■□□□ 1.24
PMS1-214ENST00000446877 DMRTC2Q8IXT2 367 aaPredicted RBP22.77■■□□□ 1.24
PMS1-214ENST00000446877 ARMC10Q8N2F6 343 aa22.77■■□□□ 1.24
PMS1-214ENST00000446877 NFAM1Q8NET5 270 aaPredicted RBP22.77■■□□□ 1.24
PMS1-214ENST00000446877 OR4K1Q8NGD4 311 aa22.77■■□□□ 1.24
PMS1-214ENST00000446877 POM121Q96HA1 1249 aa22.77■■□□□ 1.24
PMS1-214ENST00000446877 SARGQ9BW04 601 aa22.77■■□□□ 1.24
PMS1-214ENST00000446877 RHBGQ9H310 441 aa22.77■■□□□ 1.24
PMS1-214ENST00000446877 KCNN3Q9UGI6 736 aa22.77■■□□□ 1.24
PMS1-214ENST00000446877 FBXW2Q9UKT8 454 aa22.77■■□□□ 1.24
PMS1-214ENST00000446877 MAD1L1Q9Y6D9 718 aa22.77■■□□□ 1.24
PMS1-214ENST00000446877 TRBV11-1A0A0K0K1C0 115 aa22.76■■□□□ 1.23
PMS1-214ENST00000446877 TCRBV16S1A1N1A0A5B0 115 aa22.76■■□□□ 1.23
PMS1-214ENST00000446877 URADA6NGE7 173 aa22.76■■□□□ 1.23
PMS1-214ENST00000446877 RNH1P13489 461 aaKnown RBP22.76■■□□□ 1.23
PMS1-214ENST00000446877 MSX1P28360 303 aa22.76■■□□□ 1.23
PMS1-214ENST00000446877 PMPCAQ10713 525 aa22.76■■□□□ 1.23
PMS1-214ENST00000446877 MYBPHQ13203 477 aa22.76■■□□□ 1.23
PMS1-214ENST00000446877 ANKRD22Q5VYY1 191 aa22.76■■□□□ 1.23
PMS1-214ENST00000446877 STRA8Q7Z7C7 330 aa22.76■■□□□ 1.23
PMS1-214ENST00000446877 CCDC71Q8IV32 467 aaPredicted RBP22.76■■□□□ 1.23
PMS1-214ENST00000446877 ZFP62Q8NB50 900 aaPredicted RBP22.76■■□□□ 1.23
PMS1-214ENST00000446877 NT5CQ8TCD5 201 aa22.76■■□□□ 1.23
PMS1-214ENST00000446877 TIMMDC1Q9NPL8 285 aa22.76■■□□□ 1.23
PMS1-214ENST00000446877 ARL15Q9NXU5 204 aa22.76■■□□□ 1.23
PMS1-214ENST00000446877 TAS2R13Q9NYV9 303 aa22.76■■□□□ 1.23
PMS1-214ENST00000446877 ZFP69BQ9UJL9 534 aa22.76■■□□□ 1.23
PMS1-214ENST00000446877 GOLGA8MH3BSY2 632 aa22.75■■□□□ 1.23
PMS1-214ENST00000446877 HOXD4P09016 255 aaPredicted RBP22.75■■□□□ 1.23
PMS1-214ENST00000446877 CD99P14209 185 aa22.75■■□□□ 1.23
PMS1-214ENST00000446877 HNF4AP41235 474 aa22.75■■□□□ 1.23
PMS1-214ENST00000446877 GPR85P60893 370 aa22.75■■□□□ 1.23
PMS1-214ENST00000446877 TFF3Q07654 80 aa22.75■■□□□ 1.23
PMS1-214ENST00000446877 DHX9Q08211 1270 aaKnown RBP22.75■■□□□ 1.23
PMS1-214ENST00000446877 CSHL1Q14406 222 aa22.75■■□□□ 1.23
PMS1-214ENST00000446877 HSP90AA5PQ58FG0 334 aa22.75■■□□□ 1.23
PMS1-214ENST00000446877 DUPD1Q68J44 220 aa22.75■■□□□ 1.23
PMS1-214ENST00000446877 B3GNT7Q8NFL0 401 aa22.75■■□□□ 1.23
PMS1-214ENST00000446877 UTP15Q8TED0 518 aaKnown RBP22.75■■□□□ 1.23
PMS1-214ENST00000446877 PYCR2Q96C36 320 aa22.75■■□□□ 1.23
PMS1-214ENST00000446877 NDNQ99608 321 aa22.75■■□□□ 1.23
PMS1-214ENST00000446877 FAM167BQ9BTA0 163 aa22.75■■□□□ 1.23
PMS1-214ENST00000446877 TRIM54Q9BYV2 358 aa22.75■■□□□ 1.23
PMS1-214ENST00000446877 DEFB127Q9H1M4 99 aa22.75■■□□□ 1.23
PMS1-214ENST00000446877 MAP1AP78559 2803 aaPredicted RBP22.74■■□□□ 1.23
PMS1-214ENST00000446877 ITGA10O75578 1167 aa22.74■■□□□ 1.23
PMS1-214ENST00000446877 ZWINTO95229 277 aa22.74■■□□□ 1.23
PMS1-214ENST00000446877 RAB8AP61006 207 aa22.74■■□□□ 1.23
PMS1-214ENST00000446877 HYAL2Q12891 473 aa22.74■■□□□ 1.23
PMS1-214ENST00000446877 PHKG1Q16816 387 aa22.74■■□□□ 1.23
PMS1-214ENST00000446877 MDGA2Q7Z553 956 aa22.74■■□□□ 1.23
PMS1-214ENST00000446877 CLYBLQ8N0X4 340 aa22.74■■□□□ 1.23
PMS1-214ENST00000446877 MCUQ8NE86 351 aa22.74■■□□□ 1.23
PMS1-214ENST00000446877 OR52N2Q8NGI0 321 aa22.74■■□□□ 1.23
PMS1-214ENST00000446877 OR5M3Q8NGP4 307 aa22.74■■□□□ 1.23
PMS1-214ENST00000446877 LINGO1Q96FE5 620 aa22.74■■□□□ 1.23
PMS1-214ENST00000446877 NECTIN3Q9NQS3 549 aa22.74■■□□□ 1.23
PMS1-214ENST00000446877 PLSCR2Q9NRY7 297 aa22.74■■□□□ 1.23
PMS1-214ENST00000446877 IARS2Q9NSE4 1012 aaKnown RBP22.74■■□□□ 1.23
PMS1-214ENST00000446877 ZFATQ9P243 1243 aa22.74■■□□□ 1.23
PMS1-214ENST00000446877 ERVK-11Q9UQG0 969 aa22.74■■□□□ 1.23
PMS1-214ENST00000446877 IGKV3D-11A0A0A0MRZ8 115 aa22.73■■□□□ 1.23
PMS1-214ENST00000446877 MYO1DO94832 1006 aa22.73■■□□□ 1.23
PMS1-214ENST00000446877 KRT14P02533 472 aa22.73■■□□□ 1.23
PMS1-214ENST00000446877 TUBB4AP04350 444 aa22.73■■□□□ 1.23
PMS1-214ENST00000446877 DNAJA1P31689 397 aaKnown RBP22.73■■□□□ 1.23
PMS1-214ENST00000446877 AHRP35869 848 aa22.73■■□□□ 1.23
PMS1-214ENST00000446877 SCTRP47872 440 aa22.73■■□□□ 1.23
PMS1-214ENST00000446877 SSR4P51571 173 aa22.73■■□□□ 1.23
PMS1-214ENST00000446877 CATSPEREQ5SY80 951 aa22.73■■□□□ 1.23
PMS1-214ENST00000446877 PAQR3Q6TCH7 311 aa22.73■■□□□ 1.23
PMS1-214ENST00000446877 OR56A3Q8NH54 315 aa22.73■■□□□ 1.23
PMS1-214ENST00000446877 ATL1Q8WXF7 558 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms