RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 ZNF347Q96SE7 839 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 CDX2Q99626 313 aaPredicted RBP8.04□□□□□ -1.12
USP54-203ENST00000418501 TBC1D17Q9HA65 648 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 EXD2Q9NVH0 621 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 KLHL28Q9NXS3 571 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 TAAR2Q9P1P5 351 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 CPNE7Q9UBL6 633 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 EGFL7Q9UHF1 273 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 CCL27Q9Y4X3 112 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 DOCK6Q96HP0 2047 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 DUXAA6NLW8 204 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 ERI3O43414 337 aaKnown RBP8.03□□□□□ -1.12
USP54-203ENST00000418501 ZNF682O95780 498 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 IL1RNP18510 177 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 BIKQ13323 160 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 PAGE3Q5JUK9 113 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 CPZQ66K79 652 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 TMEM92Q6UXU6 159 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 SZRD1Q7Z422 152 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 NRROSQ86YC3 692 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 OR2L3Q8NG85 312 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 HHIPQ96QV1 700 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 ABCG4Q9H172 646 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 ZNF556Q9HAH1 456 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 ACTR10Q9NZ32 417 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 SIT1Q9Y3P8 196 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 SNX8Q9Y5X2 465 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 ABCB1P08183 1280 aaPredicted RBP8.03□□□□□ -1.12
USP54-203ENST00000418501 MTPNP58546 118 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 CCSMST1Q4G0I0 132 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 LRRC23Q53EV4 343 aaPredicted RBP8.03□□□□□ -1.12
USP54-203ENST00000418501 PRPF38BQ5VTL8 546 aaKnown RBP8.03□□□□□ -1.12
USP54-203ENST00000418501 TTC23Q5W5X9 447 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 IYDQ6PHW0 289 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 RETREG3Q86VR2 466 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 KRTCAP2Q8N6L1 136 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 ANKFN1Q8N957 763 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 GPBAR1Q8TDU6 330 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 COQ8BQ96D53 544 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 OR4K3Q96R72 315 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 SERINC2Q96SA4 455 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 CD180Q99467 661 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 TEX12Q9BXU0 123 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 CHRDQ9H2X0 955 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 HRASLS2Q9NWW9 162 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 EBF1Q9UH73 591 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 MYLKQ15746 1914 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 SPTY2D1-AS1A0A0U1RR47 76 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 NOL3O60936 208 aaKnown RBP8.03□□□□□ -1.12
USP54-203ENST00000418501 ESRRGP62508 458 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 CSNK1G2P78368 415 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 ALG11Q2TAA5 492 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 INAVAQ3KP66 663 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 FIGLAQ6QHK4 219 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 TMEM26Q6ZUK4 368 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 FAM129CQ86XR2 697 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 ZCCHC7Q8N3Z6 543 aaKnown RBP8.03□□□□□ -1.12
USP54-203ENST00000418501 OR4K1Q8NGD4 311 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 OR52N2Q8NGI0 321 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 LMX1AQ8TE12 382 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 PROX1Q92786 737 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 VOPP1Q96AW1 172 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 SEPHS2Q99611 448 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 ZFYVE21Q9BQ24 234 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 SLC35A5Q9BS91 424 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 NKX1-2Q9UD57 310 aaPredicted RBP8.03□□□□□ -1.12
USP54-203ENST00000418501 CDC14AQ9UNH5 594 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 C9JVG2 144 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 ACOT8O14734 319 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 VILLO15195 856 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 SH3BGRLO75368 114 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 EPORP19235 508 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 HHEXQ03014 270 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 FGL2Q14314 439 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 KIAA0040Q15053 153 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 ZNF658BQ4V348 819 aaPredicted RBP8.03□□□□□ -1.12
USP54-203ENST00000418501 RABL3Q5HYI8 236 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 OGFRL1Q5TC84 451 aaPredicted RBP8.03□□□□□ -1.12
USP54-203ENST00000418501 TICAM1Q8IUC6 712 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 CARFQ8N187 725 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 SETD9Q8NE22 299 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 SFXN5Q8TD22 340 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 PCDHAC1Q9H158 963 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 XKR8Q9H6D3 395 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 C6orf106Q9H6K1 298 aaPredicted RBP8.03□□□□□ -1.12
USP54-203ENST00000418501 REEP1Q9H902 201 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 ANKHQ9HCJ1 492 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 CD320Q9NPF0 282 aa8.03□□□□□ -1.12
USP54-203ENST00000418501 KRCC1Q9NPI7 259 aaPredicted RBP8.03□□□□□ -1.12
USP54-203ENST00000418501 OR6C74A6NCV1 312 aa8.02□□□□□ -1.13
USP54-203ENST00000418501 POM121BA6NF01 834 aa8.02□□□□□ -1.13
USP54-203ENST00000418501 CLOCKO15516 846 aa8.02□□□□□ -1.13
USP54-203ENST00000418501 CREG1O75629 220 aa8.02□□□□□ -1.13
USP54-203ENST00000418501 FAM58BPP0C7Q3 252 aa8.02□□□□□ -1.13
USP54-203ENST00000418501 BMP2P12643 396 aa8.02□□□□□ -1.13
USP54-203ENST00000418501 CPN2P22792 545 aa8.02□□□□□ -1.13
USP54-203ENST00000418501 AVPR1BP47901 424 aa8.02□□□□□ -1.13
USP54-203ENST00000418501 ATP6AP1Q15904 470 aa8.02□□□□□ -1.13
USP54-203ENST00000418501 VMACQ2NL98 169 aa8.02□□□□□ -1.13
USP54-203ENST00000418501 TCTE1Q5JU00 501 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms