RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 F5H423 210 aaPredicted RBP5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 M0QYT0 321 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 FFAR3O14843 346 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 SLC22A2O15244 555 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 ITM2AO43736 263 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 NIPSNAP2O75323 286 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 PTP4A3O75365 173 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 CRLF1O75462 422 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 STC2O76061 302 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 CCNDBP1O95273 360 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 NDUFA10O95299 355 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 TBX18O95935 607 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 ATP1A1P05023 1023 aaKnown RBP5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 ADRB2P07550 413 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 VSIG10L2P0DP72 767 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 SLC2A3P11169 496 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 PDGFRAP16234 1089 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 TSHRP16473 764 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 DNASE1P24855 282 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 CTNNA2P26232 953 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 PSMA5P28066 241 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 HOXD9P28356 352 aaPredicted RBP5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 CYLC1P35663 651 aaPredicted RBP5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 HSD17B3P37058 310 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 HCAR3P49019 387 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 CASP5P51878 434 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 METAP1P53582 386 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 C21orf58P58505 322 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 CTXN1P60606 82 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 UBE2IP63279 158 aaKnown RBP5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 TNNC1P63316 161 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 RHAGQ02094 409 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 ACY1Q03154 408 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 HGFACQ04756 655 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 ELAVL3Q14576 367 aaKnown RBP5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 USP10Q14694 798 aaKnown RBP5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 SF3B4Q15427 424 aaKnown RBP eCLIP5.28□□□□□ -1.561e-9■■■■■ 43.2
ECHDC1-206ENST00000417628 ZNF284Q2VY69 593 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 FLYWCH1Q4VC44 716 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 FAM76BQ5HYJ3 339 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 CERCAMQ5T4B2 595 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 CACHD1Q5VU97 1274 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 AADACL4Q5VUY2 407 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 FAM205BPQ63HN1 556 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 CFAP161Q6P656 301 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 KDELC1Q6UW63 502 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 IZUMO2Q6UXV1 221 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 CEACAM20Q6UY09 585 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 C16orf47Q6ZP98 133 aaPredicted RBP5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 UTS2BQ765I0 119 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 ARPINQ7Z6K5 226 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 SATL1Q86VE3 508 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 SLC47A2Q86VL8 602 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 HORMAD1Q86X24 394 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 PPP1R3BQ86XI6 285 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 ZNF354CQ86Y25 554 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 PDSS2Q86YH6 399 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 SLC44A2Q8IWA5 706 aaPredicted RBP5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 TCAIMQ8N3R3 496 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 FSTL5Q8N475 847 aaPredicted RBP5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 ASCC1Q8N9N2 400 aaKnown RBP5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 RBM15BQ8NDT2 890 aaKnown RBP5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 CATSPER1Q8NEC5 780 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 FDCSPQ8NFU4 85 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 OR52K1Q8NGK4 314 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 OR8K3Q8NH51 312 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 CASKIN2Q8WXE0 1202 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 RAD51AP1Q96B01 352 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 TMEM80Q96HE8 168 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 PCED1BQ96HM7 432 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 DNAJC1Q96KC8 554 aaKnown RBP5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 TREX2Q9BQ50 279 aaPredicted RBP5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 SELENOSQ9BQE4 189 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 NUDT22Q9BRQ3 303 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 TMEM121Q9BTD3 319 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 CINPQ9BW66 212 aaPredicted RBP5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 NUDT9Q9BW91 350 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 CCDC106Q9BWC9 280 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 TBC1D10AQ9BXI6 508 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 C1QTNF7Q9BXJ2 289 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 PLA2G12AQ9BZM1 189 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 ELOVL4Q9GZR5 314 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 TCEAL2Q9H3H9 227 aaPredicted RBP5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 S100A14Q9HCY8 104 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 FGFR1OP2Q9NVK5 253 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 NDE1Q9NXR1 346 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 SENP1Q9P0U3 644 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 NTMQ9P121 344 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 CNOT8Q9UFF9 292 aaKnown RBP5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 CPSF3Q9UKF6 684 aaKnown RBP5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 CLEC4AQ9UMR7 237 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 GPR34Q9UPC5 381 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 EIF3LQ9Y262 564 aaKnown RBP5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 DTNAQ9Y4J8 743 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 ACTL7AQ9Y615 435 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 CYP46A1Q9Y6A2 500 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 EPN1Q9Y6I3 576 aaPredicted RBP5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 MXRA5Q9NR99 2828 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 POM121BA6NF01 834 aa5.27□□□□□ -1.57
ECHDC1-206ENST00000417628 TLCD2A6NGC4 264 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms