RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 GYG1P46976 350 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 RAP1GAPP47736 663 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 RFX5P48382 616 aaPredicted RBP2.42□□□□□ -2.02
MCF2-204ENST00000414978 ALDH7A1P49419 539 aaKnown RBP2.42□□□□□ -2.02
MCF2-204ENST00000414978 BTG1P62324 171 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 SHBQ15464 509 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 ATF7IP2Q5U623 682 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 MIS18BP1Q6P0N0 1132 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 KCNIP4Q6PIL6 250 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 PAQR9Q6ZVX9 377 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 CBLL1Q75N03 491 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 DDIASQ8IXT1 998 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 LRRC43Q8N309 656 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 FAM216AQ8WUB2 273 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 DDB2Q92466 427 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 EEF2KMTQ96G04 330 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 CDKN2AIPNLQ96HQ2 116 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 OR6C1Q96RD1 312 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 URM1Q9BTM9 101 aaKnown RBP2.42□□□□□ -2.02
MCF2-204ENST00000414978 MRPL1Q9BYD6 325 aaKnown RBP2.42□□□□□ -2.02
MCF2-204ENST00000414978 GPR61Q9BZJ8 451 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 SLA2Q9H6Q3 261 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 ESRP2Q9H6T0 727 aaKnown RBP2.42□□□□□ -2.02
MCF2-204ENST00000414978 ZFP64Q9NPA5 681 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 FAM53CQ9NYF3 392 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 RDH8Q9NYR8 311 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 OR6C3Q9NZP0 311 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 NPAP1Q9NZP6 1156 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 PADI3Q9ULW8 664 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 SH3GLB1Q9Y371 365 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 NEUROG3Q9Y4Z2 214 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 PRKRAO75569 313 aaKnown RBP2.42□□□□□ -2.02
MCF2-204ENST00000414978 OR6B1O95007 311 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 EPN2O95208 641 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 GAS8O95995 478 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 PCCBP05166 539 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 PLA2G4BP0C869 781 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 TDGF1P13385 188 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 CYP11B1P15538 503 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 GLRA2P23416 452 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 NR2F2P24468 414 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 FOLR3P41439 243 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 ETV1P50549 477 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 NLRP11P59045 1033 aaKnown RBP2.42□□□□□ -2.02
MCF2-204ENST00000414978 LCP2Q13094 533 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 CDH18Q13634 790 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 DUSP6Q16828 381 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 ZSWIM7Q19AV6 140 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 PCGF3Q3KNV8 242 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 RIPPLY2Q5TAB7 128 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 FNDC7Q5VTL7 733 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 ZNF770Q6IQ21 691 aaPredicted RBP2.42□□□□□ -2.02
MCF2-204ENST00000414978 AFTPHQ6ULP2 937 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 Q6ZSN1 163 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 MSANTD1Q6ZTZ1 278 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 MIER3Q7Z3K6 550 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 GPR180Q86V85 440 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 EXOC3L1Q86VI1 746 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 ZC3HC1Q86WB0 502 aaKnown RBP2.42□□□□□ -2.02
MCF2-204ENST00000414978 NKAIN4Q8IVV8 208 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 SLC5A8Q8N695 610 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 EMC1Q8N766 993 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 OR52K1Q8NGK4 314 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 OR9A1PQ8NGU1 263 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 VANGL1Q8TAA9 524 aaPredicted RBP2.42□□□□□ -2.02
MCF2-204ENST00000414978 RHBDF1Q96CC6 855 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 ZNF689Q96CS4 500 aaPredicted RBP2.42□□□□□ -2.02
MCF2-204ENST00000414978 C3orf30Q96M34 536 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 SEPHS2Q99611 448 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 SEPT5Q99719 369 aaPredicted RBP2.42□□□□□ -2.02
MCF2-204ENST00000414978 MTG1Q9BT17 334 aaPredicted RBP2.42□□□□□ -2.02
MCF2-204ENST00000414978 FOXP1Q9H334 677 aaPredicted RBP2.42□□□□□ -2.02
MCF2-204ENST00000414978 BOLA2Q9H3K6 86 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 RIMS4Q9H426 269 aaPredicted RBP2.42□□□□□ -2.02
MCF2-204ENST00000414978 EVA1AQ9H8M9 152 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 DNAJC4Q9NNZ3 241 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 PANK4Q9NVE7 773 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 GAR1Q9NY12 217 aaKnown RBP2.42□□□□□ -2.02
MCF2-204ENST00000414978 UTP6Q9NYH9 597 aaKnown RBP2.42□□□□□ -2.02
MCF2-204ENST00000414978 TXNDC16Q9P2K2 825 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 DAPK2Q9UIK4 370 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 SNX7Q9UNH6 387 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 PPIL1Q9Y3C6 166 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 MYO16Q9Y6X6 1858 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 COL5A1P20908 1838 aaPredicted RBP2.42□□□□□ -2.02
MCF2-204ENST00000414978 A0A1W2PPQ1 181 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 MACROD2A1Z1Q3 448 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 CTAGE9A4FU28 777 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 GPR89AB7ZAQ6 455 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 PGLSO95336 258 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 GPR89BP0CG08 455 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 DARSP14868 501 aaKnown RBP2.42□□□□□ -2.02
MCF2-204ENST00000414978 PSMA5P28066 241 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 TMOD1P28289 359 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 DCTDP32321 178 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 NPBWR1P48145 328 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 CDH11P55287 796 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 STX1BP61266 288 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 GPR18Q14330 331 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 RAB6CQ53S08 254 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms