RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 UPK3BL1B0FP48 263 aa19.05■□□□□ 0.64
CCDC47-202ENST00000403162 UPK3BL2E5RIL1 263 aa19.05■□□□□ 0.64
CCDC47-202ENST00000403162 ASNA1O43681 348 aa19.05■□□□□ 0.64
CCDC47-202ENST00000403162 GCM2O75603 506 aaPredicted RBP19.05■□□□□ 0.64
CCDC47-202ENST00000403162 SPNP16150 400 aa19.05■□□□□ 0.64
CCDC47-202ENST00000403162 ETV6P41212 452 aa19.05■□□□□ 0.64
CCDC47-202ENST00000403162 ASMTP46597 345 aa19.05■□□□□ 0.64
CCDC47-202ENST00000403162 OLR1P78380 273 aa19.05■□□□□ 0.64
CCDC47-202ENST00000403162 CYP4F8P98187 520 aa19.05■□□□□ 0.64
CCDC47-202ENST00000403162 IRF3Q14653 427 aa19.05■□□□□ 0.64
CCDC47-202ENST00000403162 TOR1AIP1Q5JTV8 583 aa19.05■□□□□ 0.64
CCDC47-202ENST00000403162 SLC5A8Q8N695 610 aa19.05■□□□□ 0.64
CCDC47-202ENST00000403162 MRPS31Q92665 395 aaKnown RBP19.05■□□□□ 0.64
CCDC47-202ENST00000403162 ASIC4Q96FT7 647 aa19.05■□□□□ 0.64
CCDC47-202ENST00000403162 SCRN2Q96FV2 425 aa19.05■□□□□ 0.64
CCDC47-202ENST00000403162 CRELD1Q96HD1 420 aa19.05■□□□□ 0.64
CCDC47-202ENST00000403162 HOXD1Q9GZZ0 328 aa19.05■□□□□ 0.64
CCDC47-202ENST00000403162 AMBNQ9NP70 447 aa19.05■□□□□ 0.64
CCDC47-202ENST00000403162 ZNF226Q9NYT6 803 aa19.05■□□□□ 0.64
CCDC47-202ENST00000403162 RAPGEFL1Q9UHV5 662 aa19.05■□□□□ 0.64
CCDC47-202ENST00000403162 IFT52Q9Y366 437 aa19.05■□□□□ 0.64
CCDC47-202ENST00000403162 KLK4Q9Y5K2 254 aa19.05■□□□□ 0.64
CCDC47-202ENST00000403162 TRANK1O15050 2925 aa19.05■□□□□ 0.64
CCDC47-202ENST00000403162 A8MVJ9 347 aa19.05■□□□□ 0.64
CCDC47-202ENST00000403162 SNX4O95219 450 aa19.05■□□□□ 0.64
CCDC47-202ENST00000403162 MED26O95402 600 aa19.05■□□□□ 0.64
CCDC47-202ENST00000403162 GJA1P17302 382 aa19.05■□□□□ 0.64
CCDC47-202ENST00000403162 PTPN2P17706 415 aa19.05■□□□□ 0.64
CCDC47-202ENST00000403162 RGS6P49758 472 aa19.05■□□□□ 0.64
CCDC47-202ENST00000403162 KCNC3Q14003 757 aa19.05■□□□□ 0.64
CCDC47-202ENST00000403162 CPTPQ5TA50 214 aa19.05■□□□□ 0.64
CCDC47-202ENST00000403162 ANXA8L1Q5VT79 327 aa19.05■□□□□ 0.64
CCDC47-202ENST00000403162 TXNDC8Q6A555 127 aa19.05■□□□□ 0.64
CCDC47-202ENST00000403162 Q6ZNB5 142 aa19.05■□□□□ 0.64
CCDC47-202ENST00000403162 ZNF605Q86T29 641 aa19.05■□□□□ 0.64
CCDC47-202ENST00000403162 METTL3Q86U44 580 aaKnown RBP19.05■□□□□ 0.64
CCDC47-202ENST00000403162 NPAS3Q8IXF0 933 aa19.05■□□□□ 0.64
CCDC47-202ENST00000403162 VPS37AQ8NEZ2 397 aa19.05■□□□□ 0.64
CCDC47-202ENST00000403162 CDC26Q8NHZ8 85 aa19.05■□□□□ 0.64
CCDC47-202ENST00000403162 ADAMTS19Q8TE59 1207 aa19.05■□□□□ 0.64
CCDC47-202ENST00000403162 CHTF18Q8WVB6 975 aa19.05■□□□□ 0.64
CCDC47-202ENST00000403162 MAL2Q969L2 176 aa19.05■□□□□ 0.64
CCDC47-202ENST00000403162 ATG10Q9H0Y0 220 aa19.05■□□□□ 0.64
CCDC47-202ENST00000403162 OR51E2Q9H255 320 aa19.05■□□□□ 0.64
CCDC47-202ENST00000403162 MOV10Q9HCE1 1003 aaKnown RBP19.05■□□□□ 0.64
CCDC47-202ENST00000403162 RAD18Q9NS91 495 aa19.05■□□□□ 0.64
CCDC47-202ENST00000403162 GPR83Q9NYM4 423 aa19.05■□□□□ 0.64
CCDC47-202ENST00000403162 PPIL1Q9Y3C6 166 aa19.05■□□□□ 0.64
CCDC47-202ENST00000403162 MYO9BQ13459 2157 aa19.04■□□□□ 0.64
CCDC47-202ENST00000403162 LOC100506127A0A0U1RQW1 187 aa19.04■□□□□ 0.64
CCDC47-202ENST00000403162 A0A1W2PRU2 124 aa19.04■□□□□ 0.64
CCDC47-202ENST00000403162 GABRR3A8MPY1 467 aa19.04■□□□□ 0.64
CCDC47-202ENST00000403162 DYRK3O43781 588 aa19.04■□□□□ 0.64
CCDC47-202ENST00000403162 STSP08842 583 aa19.04■□□□□ 0.64
CCDC47-202ENST00000403162 HSD3B1P14060 373 aa19.04■□□□□ 0.64
CCDC47-202ENST00000403162 HSD3B2P26439 372 aa19.04■□□□□ 0.64
CCDC47-202ENST00000403162 AQP1P29972 269 aa19.04■□□□□ 0.64
CCDC47-202ENST00000403162 UGT2B15P54855 530 aa19.04■□□□□ 0.64
CCDC47-202ENST00000403162 ZXDBP98169 803 aa19.04■□□□□ 0.64
CCDC47-202ENST00000403162 GAB1Q13480 694 aa19.04■□□□□ 0.64
CCDC47-202ENST00000403162 ARMCX4Q5H9R4 360 aa19.04■□□□□ 0.64
CCDC47-202ENST00000403162 C10orf62Q5T681 223 aaPredicted RBP19.04■□□□□ 0.64
CCDC47-202ENST00000403162 DESI1Q6ICB0 168 aa19.04■□□□□ 0.64
CCDC47-202ENST00000403162 RASGRP3Q8IV61 690 aa19.04■□□□□ 0.64
CCDC47-202ENST00000403162 METTL4Q8N3J2 472 aa19.04■□□□□ 0.64
CCDC47-202ENST00000403162 STX19Q8N4C7 294 aa19.04■□□□□ 0.64
CCDC47-202ENST00000403162 C12orf76Q8N812 135 aaPredicted RBP19.04■□□□□ 0.64
CCDC47-202ENST00000403162 SPPL2AQ8TCT8 520 aa19.04■□□□□ 0.64
CCDC47-202ENST00000403162 BHMTQ93088 406 aa19.04■□□□□ 0.64
CCDC47-202ENST00000403162 VOPP1Q96AW1 172 aa19.04■□□□□ 0.64
CCDC47-202ENST00000403162 CDCA3Q99618 268 aaPredicted RBP19.04■□□□□ 0.64
CCDC47-202ENST00000403162 SLX1AQ9BQ83 275 aa19.04■□□□□ 0.64
CCDC47-202ENST00000403162 PRDM8Q9NQV8 689 aa19.04■□□□□ 0.64
CCDC47-202ENST00000403162 MBD1Q9UIS9 605 aaPredicted RBP19.04■□□□□ 0.64
CCDC47-202ENST00000403162 MKLN1Q9UL63 735 aa19.04■□□□□ 0.64
CCDC47-202ENST00000403162 VPS4AQ9UN37 437 aa19.04■□□□□ 0.64
CCDC47-202ENST00000403162 PLK4O00444 970 aa19.03■□□□□ 0.64
CCDC47-202ENST00000403162 PTHP01270 115 aa19.03■□□□□ 0.64
CCDC47-202ENST00000403162 GTF2E2P29084 291 aaKnown RBP19.03■□□□□ 0.64
CCDC47-202ENST00000403162 CASP3P42574 277 aa19.03■□□□□ 0.64
CCDC47-202ENST00000403162 SEMG2Q02383 582 aa19.03■□□□□ 0.64
CCDC47-202ENST00000403162 PTSQ03393 145 aa19.03■□□□□ 0.64
CCDC47-202ENST00000403162 USP45Q70EL2 814 aa19.03■□□□□ 0.64
CCDC47-202ENST00000403162 FAM217AQ8IXS0 508 aa19.03■□□□□ 0.64
CCDC47-202ENST00000403162 VN1R2Q8NFZ6 395 aa19.03■□□□□ 0.64
CCDC47-202ENST00000403162 OR2AP1Q8NGE2 309 aa19.03■□□□□ 0.64
CCDC47-202ENST00000403162 MTERF1Q99551 399 aaKnown RBP19.03■□□□□ 0.64
CCDC47-202ENST00000403162 BRF2Q9HAW0 419 aa19.03■□□□□ 0.64
CCDC47-202ENST00000403162 QPCTLQ9NXS2 382 aa19.03■□□□□ 0.64
CCDC47-202ENST00000403162 COLQQ9Y215 455 aaPredicted RBP19.03■□□□□ 0.64
CCDC47-202ENST00000403162 RBMX2Q9Y388 322 aaKnown RBP19.03■□□□□ 0.64
CCDC47-202ENST00000403162 PNMA8CA0A1B0GUJ8 204 aa19.03■□□□□ 0.64
CCDC47-202ENST00000403162 KRT87PA6NCN2 255 aa19.03■□□□□ 0.64
CCDC47-202ENST00000403162 RHOP08100 348 aa19.03■□□□□ 0.64
CCDC47-202ENST00000403162 S100A1P23297 94 aa19.03■□□□□ 0.64
CCDC47-202ENST00000403162 IDH2P48735 452 aaKnown RBP19.03■□□□□ 0.64
CCDC47-202ENST00000403162 NUDT6P53370 316 aa19.03■□□□□ 0.64
CCDC47-202ENST00000403162 RAE1P78406 368 aaKnown RBP19.03■□□□□ 0.64
CCDC47-202ENST00000403162 ELOAQ14241 798 aaKnown RBP19.03■□□□□ 0.64
CCDC47-202ENST00000403162 MICAQ29983 383 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms