RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 EIF3LQ9Y262 564 aaKnown RBP16.13■□□□□ 0.17
TSPAN4-205ENST00000397406 RUVBL1Q9Y265 456 aaKnown RBP16.13■□□□□ 0.17
TSPAN4-205ENST00000397406 DLGAP4Q9Y2H0 992 aa16.13■□□□□ 0.17
TSPAN4-205ENST00000397406 ITPR1Q14643 2758 aa16.13■□□□□ 0.17
TSPAN4-205ENST00000397406 NTN3O00634 580 aaPredicted RBP16.12■□□□□ 0.17
TSPAN4-205ENST00000397406 SLC22A2O15244 555 aa16.12■□□□□ 0.17
TSPAN4-205ENST00000397406 G6PDP11413 515 aa16.12■□□□□ 0.17
TSPAN4-205ENST00000397406 BCKDHAP12694 445 aa16.12■□□□□ 0.17
TSPAN4-205ENST00000397406 GPX3P22352 226 aa16.12■□□□□ 0.17
TSPAN4-205ENST00000397406 ADSLP30566 484 aaPredicted RBP16.12■□□□□ 0.17
TSPAN4-205ENST00000397406 MLLT3P42568 568 aaPredicted RBP16.12■□□□□ 0.17
TSPAN4-205ENST00000397406 ILKQ13418 452 aa16.12■□□□□ 0.17
TSPAN4-205ENST00000397406 ZSCAN26Q16670 478 aa16.12■□□□□ 0.17
TSPAN4-205ENST00000397406 CLPPQ16740 277 aaPredicted RBP16.12■□□□□ 0.17
TSPAN4-205ENST00000397406 DEFB110Q30KQ9 67 aa16.12■□□□□ 0.17
TSPAN4-205ENST00000397406 PDCD4Q53EL6 469 aaKnown RBP16.12■□□□□ 0.17
TSPAN4-205ENST00000397406 TMEM35AQ53FP2 167 aa16.12■□□□□ 0.17
TSPAN4-205ENST00000397406 ZC3H12BQ5HYM0 836 aaKnown RBP16.12■□□□□ 0.17
TSPAN4-205ENST00000397406 TOR1AIP1Q5JTV8 583 aa16.12■□□□□ 0.17
TSPAN4-205ENST00000397406 GALNT18Q6P9A2 607 aa16.12■□□□□ 0.17
TSPAN4-205ENST00000397406 C19orf48Q6RUI8 117 aa16.12■□□□□ 0.17
TSPAN4-205ENST00000397406 COMMD6Q7Z4G1 85 aa16.12■□□□□ 0.17
TSPAN4-205ENST00000397406 UBE3DQ7Z6J8 389 aa16.12■□□□□ 0.17
TSPAN4-205ENST00000397406 KMT5CQ86Y97 462 aa16.12■□□□□ 0.17
TSPAN4-205ENST00000397406 PARP9Q8IXQ6 854 aa16.12■□□□□ 0.17
TSPAN4-205ENST00000397406 LIX1Q8N485 282 aa16.12■□□□□ 0.17
TSPAN4-205ENST00000397406 OR4D9Q8NGE8 314 aa16.12■□□□□ 0.17
TSPAN4-205ENST00000397406 WDR48Q8TAF3 677 aa16.12■□□□□ 0.17
TSPAN4-205ENST00000397406 KLHL6Q8WZ60 621 aa16.12■□□□□ 0.17
TSPAN4-205ENST00000397406 RERGQ96A58 199 aaPredicted RBP16.12■□□□□ 0.17
TSPAN4-205ENST00000397406 MS4A6EQ96DS6 147 aa16.12■□□□□ 0.17
TSPAN4-205ENST00000397406 SLC41A2Q96JW4 573 aa16.12■□□□□ 0.17
TSPAN4-205ENST00000397406 DPYSL5Q9BPU6 564 aa16.12■□□□□ 0.17
TSPAN4-205ENST00000397406 REXO4Q9GZR2 422 aaKnown RBP16.12■□□□□ 0.17
TSPAN4-205ENST00000397406 PDE7BQ9NP56 450 aa16.12■□□□□ 0.17
TSPAN4-205ENST00000397406 LHX9Q9NQ69 397 aa16.12■□□□□ 0.17
TSPAN4-205ENST00000397406 MRGBPQ9NV56 204 aa16.12■□□□□ 0.17
TSPAN4-205ENST00000397406 SOHLH2Q9NX45 425 aa16.12■□□□□ 0.17
TSPAN4-205ENST00000397406 CAPN7Q9Y6W3 813 aa16.12■□□□□ 0.17
TSPAN4-205ENST00000397406 C4orf51C9J302 202 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 ANKRD28O15084 1053 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 TOX3O15405 576 aaPredicted RBP16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 UBOX5O94941 541 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 SLC35G6P0C7Q6 338 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 PRPS2P11908 318 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 CD1EP15812 388 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 SDC1P18827 310 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 TACR1P25103 407 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 PIK3R1P27986 724 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 MAPK1P28482 360 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 TIA1P31483 386 aaKnown RBP eCLIP16.11■□□□□ 0.171e-7■□□□□ 8.4
TSPAN4-205ENST00000397406 STX1BP61266 288 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 HSD11B2P80365 405 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 RGS1Q08116 209 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 SNAP47Q5SQN1 464 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 CDCP2Q5VXM1 449 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 CYP20A1Q6UW02 462 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 MCATQ8IVS2 390 aaKnown RBP16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 MIER2Q8N344 545 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 KCT2Q8NC54 265 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 CAMKVQ8NCB2 501 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 RGMAQ96B86 450 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 EBPLQ9BY08 206 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 ACTL8Q9H568 366 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 ZNF768Q9H5H4 540 aaKnown RBP16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 ANKRD11Q6UB99 2663 aaPredicted RBP16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 NBEAQ8NFP9 2946 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 SCN3AQ9NY46 2000 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 PSMD12O00232 456 aaPredicted RBP16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 TLX3O43711 291 aaPredicted RBP16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 PCDH7O60245 1069 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 KLHL18O94889 574 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 CTSBP07858 339 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 ANKRD34CP0C6C1 535 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 THRAP10827 490 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 BSGP35613 385 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 SEPHS1P49903 392 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 RAP1GDS1P52306 607 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 ARFIP1P53367 373 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 VSX2P58304 361 aaPredicted RBP16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 STXBP1P61764 594 aaKnown RBP16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 SNRPNP63162 240 aaKnown RBP16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 KRT72Q14CN4 511 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 HKDC1Q2TB90 917 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 MANEAQ5SRI9 462 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 ARHGAP22Q7Z5H3 698 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 D2HGDHQ8N465 521 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 OR2L5Q8NG80 312 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 OR9I1Q8NGQ6 314 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 GAL3ST3Q96A11 431 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 CRELD1Q96HD1 420 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 SLC45A3Q96JT2 553 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 ZNF285Q96NJ3 590 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 GFM1Q96RP9 751 aaKnown RBP16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 CENPKQ9BS16 269 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 SORBS1Q9BX66 1292 aaKnown RBP16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 SYNDIG1Q9H7V2 258 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 ARL8BQ9NVJ2 186 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 AHSPQ9NZD4 102 aa16.11■□□□□ 0.17
TSPAN4-205ENST00000397406 ZIM2Q9NZV7 527 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms