RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 BRI3BPQ8WY22 251 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 TESCQ96BS2 214 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 TAMM41Q96BW9 452 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 LIPT1Q9Y234 373 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 PLEKHA6Q9Y2H5 1048 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 PADI2Q9Y2J8 665 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 ALG5Q9Y673 324 aa5.28□□□□□ -1.56
VPS13C-204ENST00000395898 CPED1A4D0V7 1026 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 TTLL8A6PVC2 850 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 BLOC1S5-TXNDC5H3BN57 136 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 APBB3O95704 486 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 GALTP07902 379 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 HTR1AP08908 422 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 C7P10643 843 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 ACTC1P68032 377 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 ACTA1P68133 377 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 ADAM17P78536 824 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 SLC3A1Q07837 685 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 MAD2L1BPQ15013 274 aaPredicted RBP5.27□□□□□ -1.57
VPS13C-204ENST00000395898 NPY5RQ15761 445 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 PLEKHN1Q494U1 663 aaPredicted RBP5.27□□□□□ -1.57
VPS13C-204ENST00000395898 SLC25A25Q6KCM7 469 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 OR2L8Q8NGY9 312 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 THAP6Q8TBB0 222 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 RFT1Q96AA3 541 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 CREB3L1Q96BA8 519 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 PELOQ9BRX2 385 aaKnown RBP5.27□□□□□ -1.57
VPS13C-204ENST00000395898 STRADBQ9C0K7 418 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 TRPV4Q9HBA0 871 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 AOC2O75106 756 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 TRAPPC6AO75865 159 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 CREB1P16220 341 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 FPR1P21462 350 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 FOXN2P32314 431 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 DHPSP49366 369 aaPredicted RBP5.27□□□□□ -1.57
VPS13C-204ENST00000395898 WDR4P57081 412 aaKnown RBP5.27□□□□□ -1.57
VPS13C-204ENST00000395898 UFM1P61960 85 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 ZNF45Q02386 682 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 PRSS58Q8IYP2 241 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 OR52B2Q96RD2 323 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 IL4I1Q96RQ9 567 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 CTPS2Q9NRF8 586 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 ZNF358Q9NW07 568 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 ASB6Q9NWX5 421 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 GNG8Q9UK08 70 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 PPM1HQ9ULR3 514 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 ADAMTS3O15072 1205 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 HCKP08631 526 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 OXTRP30559 389 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 ACTA2P62736 377 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 ACTG2P63267 376 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 GRIK2Q13002 908 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 KCTD19Q17RG1 926 aaPredicted RBP5.27□□□□□ -1.57
VPS13C-204ENST00000395898 FLYWCH1Q4VC44 716 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 ZNF517Q6ZMY9 492 aaPredicted RBP5.27□□□□□ -1.57
VPS13C-204ENST00000395898 ZSCAN1Q8NBB4 408 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 AKAP1Q92667 903 aaKnown RBP eCLIP5.27□□□□□ -1.57
VPS13C-204ENST00000395898 KCNN1Q92952 543 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 DHRS1Q96LJ7 313 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 SLC30A2Q9BRI3 323 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 RPF2Q9H7B2 306 aaKnown RBP5.27□□□□□ -1.57
VPS13C-204ENST00000395898 PCDHGA3Q9Y5H0 932 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 C5P01031 1676 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 EME2A4GXA9 379 aaPredicted RBP5.27□□□□□ -1.57
VPS13C-204ENST00000395898 C9IYK1 514 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 M0QX08 132 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 MUSKO15146 869 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 ANXA3P12429 323 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 ACVRL1P37023 503 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 CLRN1P58418 232 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 MLIPQ5VWP3 458 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 TMEM225Q6GV28 225 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 PAQR7Q86WK9 346 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 PDSS2Q86YH6 399 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 JAGN1Q8N5M9 183 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 ZNF565Q8N9K5 539 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 SETD7Q8WTS6 366 aaKnown RBP5.27□□□□□ -1.57
VPS13C-204ENST00000395898 DAZLQ92904 295 aaKnown RBP5.27□□□□□ -1.57
VPS13C-204ENST00000395898 KLHDC7BQ96G42 594 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 ZNF317Q96PQ6 595 aaPredicted RBP5.27□□□□□ -1.57
VPS13C-204ENST00000395898 CHIAQ9BZP6 476 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 ZNF69Q9UC07 566 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 A0A0D9SEW6 157 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 SH3PXD2BA1X283 911 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 HTR3EA5X5Y0 456 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 PDLIM1O00151 329 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 LEFTY2O00292 366 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 DLX3O60479 287 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 KCNJ13O60928 360 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 ABCB7O75027 752 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 FARS2O95363 451 aaKnown RBP5.27□□□□□ -1.57
VPS13C-204ENST00000395898 HNRNPA1P09651 372 aaKnown RBP eCLIP5.27□□□□□ -1.57
VPS13C-204ENST00000395898 AZGP1P25311 298 aaKnown RBP5.27□□□□□ -1.57
VPS13C-204ENST00000395898 DUSP3P51452 185 aaPredicted RBP5.27□□□□□ -1.57
VPS13C-204ENST00000395898 CDH11P55287 796 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 CLCA4Q14CN2 919 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 TEAD2Q15562 447 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 TRAM1L1Q8N609 369 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 ZSCAN4Q8NAM6 433 aaPredicted RBP5.27□□□□□ -1.57
VPS13C-204ENST00000395898 GLYATL1Q969I3 302 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms