RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 RIF1Q5UIP0 2472 aaKnown RBP23.1■■□□□ 1.29
LRFN4-202ENST00000393952 KLHL18O94889 574 aa23.1■■□□□ 1.29
LRFN4-202ENST00000393952 FOLR1P15328 257 aa23.1■■□□□ 1.29
LRFN4-202ENST00000393952 TPP2P29144 1249 aaPredicted RBP23.1■■□□□ 1.29
LRFN4-202ENST00000393952 SSR2P43308 183 aa23.1■■□□□ 1.29
LRFN4-202ENST00000393952 IRX1P78414 480 aaPredicted RBP23.1■■□□□ 1.29
LRFN4-202ENST00000393952 GPR19Q15760 415 aa23.1■■□□□ 1.29
LRFN4-202ENST00000393952 ZSCAN26Q16670 478 aa23.1■■□□□ 1.29
LRFN4-202ENST00000393952 PRTGQ2VWP7 1150 aa23.1■■□□□ 1.29
LRFN4-202ENST00000393952 AGKQ53H12 422 aa23.1■■□□□ 1.29
LRFN4-202ENST00000393952 TMTC4Q5T4D3 741 aa23.1■■□□□ 1.29
LRFN4-202ENST00000393952 OR4C11Q6IEV9 310 aa23.1■■□□□ 1.29
LRFN4-202ENST00000393952 TRIM40Q6P9F5 258 aa23.1■■□□□ 1.29
LRFN4-202ENST00000393952 AMER3Q8N944 861 aa23.1■■□□□ 1.29
LRFN4-202ENST00000393952 UTP15Q8TED0 518 aaKnown RBP23.1■■□□□ 1.29
LRFN4-202ENST00000393952 N4BP2L2Q92802 583 aaPredicted RBP23.1■■□□□ 1.29
LRFN4-202ENST00000393952 EGLN2Q96KS0 407 aa23.1■■□□□ 1.29
LRFN4-202ENST00000393952 TEX37Q96LM6 180 aa23.1■■□□□ 1.29
LRFN4-202ENST00000393952 NLNQ9BYT8 704 aa23.1■■□□□ 1.29
LRFN4-202ENST00000393952 PRDM7Q9NQW5 492 aa23.1■■□□□ 1.29
LRFN4-202ENST00000393952 MCM8Q9UJA3 840 aa23.1■■□□□ 1.29
LRFN4-202ENST00000393952 SCN3AQ9NY46 2000 aa23.09■■□□□ 1.29
LRFN4-202ENST00000393952 ZNF292O60281 2723 aa23.09■■□□□ 1.29
LRFN4-202ENST00000393952 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.09■■□□□ 1.29
LRFN4-202ENST00000393952 GNG14A0A1W2PPG7 69 aa23.09■■□□□ 1.29
LRFN4-202ENST00000393952 C9JVG2 144 aa23.09■■□□□ 1.29
LRFN4-202ENST00000393952 ANKRD28O15084 1053 aa23.09■■□□□ 1.29
LRFN4-202ENST00000393952 SLC22A2O15244 555 aa23.09■■□□□ 1.29
LRFN4-202ENST00000393952 ADSLP30566 484 aaPredicted RBP23.09■■□□□ 1.29
LRFN4-202ENST00000393952 NHLH1Q02575 133 aa23.09■■□□□ 1.29
LRFN4-202ENST00000393952 MANEAQ5SRI9 462 aa23.09■■□□□ 1.29
LRFN4-202ENST00000393952 PHF19Q5T6S3 580 aa23.09■■□□□ 1.29
LRFN4-202ENST00000393952 ZNF793Q6ZN11 406 aa23.09■■□□□ 1.29
LRFN4-202ENST00000393952 PAGE2Q7Z2X7 111 aa23.09■■□□□ 1.29
LRFN4-202ENST00000393952 B3GNT8Q7Z7M8 397 aa23.09■■□□□ 1.29
LRFN4-202ENST00000393952 NUDT13Q86X67 352 aa23.09■■□□□ 1.29
LRFN4-202ENST00000393952 SRFBP1Q8NEF9 429 aaKnown RBP23.09■■□□□ 1.29
LRFN4-202ENST00000393952 KCNC2Q96PR1 638 aa23.09■■□□□ 1.29
LRFN4-202ENST00000393952 MRGBPQ9NV56 204 aa23.09■■□□□ 1.29
LRFN4-202ENST00000393952 ZIM2Q9NZV7 527 aa23.09■■□□□ 1.29
LRFN4-202ENST00000393952 COL27A1Q8IZC6 1860 aaPredicted RBP23.09■■□□□ 1.29
LRFN4-202ENST00000393952 TMEM150CB9EJG8 249 aa23.08■■□□□ 1.29
LRFN4-202ENST00000393952 AGRPO00253 132 aa23.08■■□□□ 1.29
LRFN4-202ENST00000393952 ZSCAN9O15535 394 aaPredicted RBP23.08■■□□□ 1.29
LRFN4-202ENST00000393952 SMIM10L1P0DMW3 83 aa23.08■■□□□ 1.29
LRFN4-202ENST00000393952 TGM3Q08188 693 aa23.08■■□□□ 1.29
LRFN4-202ENST00000393952 TMEM214Q6NUQ4 689 aaKnown RBP23.08■■□□□ 1.29
LRFN4-202ENST00000393952 GK5Q6ZS86 529 aa23.08■■□□□ 1.29
LRFN4-202ENST00000393952 OR8K5Q8NH50 307 aa23.08■■□□□ 1.29
LRFN4-202ENST00000393952 CDC26Q8NHZ8 85 aa23.08■■□□□ 1.29
LRFN4-202ENST00000393952 PROKR1Q8TCW9 393 aa23.08■■□□□ 1.29
LRFN4-202ENST00000393952 NUDT8Q8WV74 236 aa23.08■■□□□ 1.29
LRFN4-202ENST00000393952 SMIM10Q96HG1 83 aa23.08■■□□□ 1.29
LRFN4-202ENST00000393952 TBCDQ9BTW9 1192 aa23.08■■□□□ 1.29
LRFN4-202ENST00000393952 SPRTNQ9H040 489 aaPredicted RBP23.08■■□□□ 1.29
LRFN4-202ENST00000393952 DDX31Q9H8H2 851 aaKnown RBP23.08■■□□□ 1.29
LRFN4-202ENST00000393952 IRAK4Q9NWZ3 460 aa23.08■■□□□ 1.29
LRFN4-202ENST00000393952 CCDC167Q9P0B6 97 aa23.08■■□□□ 1.29
LRFN4-202ENST00000393952 ADAM29Q9UKF5 820 aa23.08■■□□□ 1.29
LRFN4-202ENST00000393952 URADA6NGE7 173 aa23.07■■□□□ 1.28
LRFN4-202ENST00000393952 TXNDC9O14530 226 aa23.07■■□□□ 1.28
LRFN4-202ENST00000393952 RFPL3O75679 317 aa23.07■■□□□ 1.28
LRFN4-202ENST00000393952 SLC22A3O75751 556 aa23.07■■□□□ 1.28
LRFN4-202ENST00000393952 CBX6O95503 412 aa23.07■■□□□ 1.28
LRFN4-202ENST00000393952 ATP5A1P25705 553 aaKnown RBP23.07■■□□□ 1.28
LRFN4-202ENST00000393952 IL12AP29459 219 aa23.07■■□□□ 1.28
LRFN4-202ENST00000393952 ARFIP1P53367 373 aa23.07■■□□□ 1.28
LRFN4-202ENST00000393952 BTN3A2P78410 334 aa23.07■■□□□ 1.28
LRFN4-202ENST00000393952 KRT72Q14CN4 511 aa23.07■■□□□ 1.28
LRFN4-202ENST00000393952 CCNYL2Q5T2Q4 361 aa23.07■■□□□ 1.28
LRFN4-202ENST00000393952 FUNDC1Q8IVP5 155 aa23.07■■□□□ 1.28
LRFN4-202ENST00000393952 ARHGEF39Q8N4T4 335 aa23.07■■□□□ 1.28
LRFN4-202ENST00000393952 KRTCAP2Q8N6L1 136 aa23.07■■□□□ 1.28
LRFN4-202ENST00000393952 POU5F2Q8N7G0 328 aa23.07■■□□□ 1.28
LRFN4-202ENST00000393952 QRFPRQ96P65 431 aa23.07■■□□□ 1.28
LRFN4-202ENST00000393952 DPY30Q9C005 99 aa23.07■■□□□ 1.28
LRFN4-202ENST00000393952 PCNX2A6NKB5 2137 aa23.07■■□□□ 1.28
LRFN4-202ENST00000393952 A0A0A6YYD5 115 aa23.06■■□□□ 1.28
LRFN4-202ENST00000393952 ERICH4A6NGS2 130 aa23.06■■□□□ 1.28
LRFN4-202ENST00000393952 TMPRSS11DO60235 418 aa23.06■■□□□ 1.28
LRFN4-202ENST00000393952 HIST1H1TP22492 207 aaPredicted RBP23.06■■□□□ 1.28
LRFN4-202ENST00000393952 CLDN8P56748 225 aa23.06■■□□□ 1.28
LRFN4-202ENST00000393952 ZNF763Q0D2J5 394 aa23.06■■□□□ 1.28
LRFN4-202ENST00000393952 TCTE1Q5JU00 501 aa23.06■■□□□ 1.28
LRFN4-202ENST00000393952 C16orf78Q8WTQ4 265 aa23.06■■□□□ 1.28
LRFN4-202ENST00000393952 ARHGAP10A1A4S6 786 aa23.06■■□□□ 1.28
LRFN4-202ENST00000393952 LRATO95237 230 aa23.06■■□□□ 1.28
LRFN4-202ENST00000393952 ALOX12P18054 663 aa23.06■■□□□ 1.28
LRFN4-202ENST00000393952 JAK1P23458 1154 aa23.06■■□□□ 1.28
LRFN4-202ENST00000393952 CERS1P27544 350 aa23.06■■□□□ 1.28
LRFN4-202ENST00000393952 ZFP36L2P47974 494 aaKnown RBP23.06■■□□□ 1.28
LRFN4-202ENST00000393952 PDX1P52945 283 aa23.06■■□□□ 1.28
LRFN4-202ENST00000393952 MAPK12P53778 367 aa23.06■■□□□ 1.28
LRFN4-202ENST00000393952 ZFP36L1Q07352 338 aaKnown RBP23.06■■□□□ 1.28
LRFN4-202ENST00000393952 ILKQ13418 452 aa23.06■■□□□ 1.28
LRFN4-202ENST00000393952 ABHD13Q7L211 337 aa23.06■■□□□ 1.28
LRFN4-202ENST00000393952 SNX32Q86XE0 403 aa23.06■■□□□ 1.28
LRFN4-202ENST00000393952 FAM9CQ8IZT9 166 aa23.06■■□□□ 1.28
LRFN4-202ENST00000393952 ACOT4Q8N9L9 421 aa23.06■■□□□ 1.28
LRFN4-202ENST00000393952 DEFB124Q8NES8 71 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms