RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 CCNYL1Q8N7R7 359 aa6.42□□□□□ -1.38
UBBP1-201ENST00000392399 KCT2Q8NC54 265 aa6.42□□□□□ -1.38
UBBP1-201ENST00000392399 C7orf57Q8NEG2 295 aa6.42□□□□□ -1.38
UBBP1-201ENST00000392399 OR2L5Q8NG80 312 aa6.42□□□□□ -1.38
UBBP1-201ENST00000392399 OR4F6Q8NGB9 312 aa6.42□□□□□ -1.38
UBBP1-201ENST00000392399 OR52B6Q8NGF0 335 aa6.42□□□□□ -1.38
UBBP1-201ENST00000392399 WDR20Q8TBZ3 569 aa6.42□□□□□ -1.38
UBBP1-201ENST00000392399 UTP15Q8TED0 518 aaKnown RBP6.42□□□□□ -1.38
UBBP1-201ENST00000392399 TRPC4APQ8TEL6 797 aa6.42□□□□□ -1.38
UBBP1-201ENST00000392399 CT55Q8WUE5 264 aa6.42□□□□□ -1.38
UBBP1-201ENST00000392399 COL26A1Q96A83 441 aa6.42□□□□□ -1.38
UBBP1-201ENST00000392399 MMABQ96EY8 250 aaPredicted RBP6.42□□□□□ -1.38
UBBP1-201ENST00000392399 VPS50Q96JG6 964 aa6.42□□□□□ -1.38
UBBP1-201ENST00000392399 FAR2Q96K12 515 aa6.42□□□□□ -1.38
UBBP1-201ENST00000392399 NSUN5Q96P11 429 aaKnown RBP6.42□□□□□ -1.38
UBBP1-201ENST00000392399 CATSPER2Q96P56 530 aa6.42□□□□□ -1.38
UBBP1-201ENST00000392399 IP6K3Q96PC2 410 aa6.42□□□□□ -1.38
UBBP1-201ENST00000392399 FRG2BQ96QU4 278 aa6.42□□□□□ -1.38
UBBP1-201ENST00000392399 NPLQ9BXD5 320 aaPredicted RBP6.42□□□□□ -1.38
UBBP1-201ENST00000392399 SLC29A3Q9BZD2 475 aa6.42□□□□□ -1.38
UBBP1-201ENST00000392399 TGIF2Q9GZN2 237 aa6.42□□□□□ -1.38
UBBP1-201ENST00000392399 REXO4Q9GZR2 422 aaKnown RBP6.42□□□□□ -1.38
UBBP1-201ENST00000392399 SYNPO2LQ9H987 977 aa6.42□□□□□ -1.38
UBBP1-201ENST00000392399 KCNK9Q9NPC2 374 aa6.42□□□□□ -1.38
UBBP1-201ENST00000392399 MKKSQ9NPJ1 570 aaPredicted RBP6.42□□□□□ -1.38
UBBP1-201ENST00000392399 SEMA4BQ9NPR2 832 aaPredicted RBP6.42□□□□□ -1.38
UBBP1-201ENST00000392399 C14orf105Q9NVL8 296 aa6.42□□□□□ -1.38
UBBP1-201ENST00000392399 NMRK1Q9NWW6 199 aa6.42□□□□□ -1.38
UBBP1-201ENST00000392399 SLC17A7Q9P2U7 560 aa6.42□□□□□ -1.38
UBBP1-201ENST00000392399 ZNF282Q9UDV7 671 aaPredicted RBP6.42□□□□□ -1.38
UBBP1-201ENST00000392399 TRPS1Q9UHF7 1281 aa6.42□□□□□ -1.38
UBBP1-201ENST00000392399 TCFL5Q9UL49 500 aa6.42□□□□□ -1.38
UBBP1-201ENST00000392399 SNX6Q9UNH7 406 aa6.42□□□□□ -1.38
UBBP1-201ENST00000392399 RNF11Q9Y3C5 154 aa6.42□□□□□ -1.38
UBBP1-201ENST00000392399 MAP4K5Q9Y4K4 846 aa6.42□□□□□ -1.38
UBBP1-201ENST00000392399 PTPRQQ9UMZ3 2332 aa6.42□□□□□ -1.38
UBBP1-201ENST00000392399 ITPR1Q14643 2758 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 MGAQ8IWI9 3026 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 A0A0A6YYC8 382 aaPredicted RBP6.41□□□□□ -1.38
UBBP1-201ENST00000392399 SERTM1A2A2V5 107 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 SYNDIG1LA6NDD5 238 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 VSTM2BA6NLU5 285 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 HMGB1P1B2RPK0 211 aaPredicted RBP6.41□□□□□ -1.38
UBBP1-201ENST00000392399 I3L1I5 382 aaPredicted RBP6.41□□□□□ -1.38
UBBP1-201ENST00000392399 NPHS1O60500 1241 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 ULK1O75385 1050 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 CREG1O75629 220 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 KLF7O75840 302 aaPredicted RBP6.41□□□□□ -1.38
UBBP1-201ENST00000392399 MED26O95402 600 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 TGFB1P01137 390 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 KRT6AP02538 564 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 KRT6BP04259 564 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 BPGMP07738 259 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 FGF4P08620 206 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 ZGLP1P0C6A0 271 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 PCNAP12004 261 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 HSD3B1P14060 373 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 FBLP22087 321 aaKnown RBP6.41□□□□□ -1.38
UBBP1-201ENST00000392399 F8A1P23610 371 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 HSD3B2P26439 372 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 ITPKBP27987 946 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 ALDH3A1P30838 453 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 OR1D4P47884 311 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 KRT6CP48668 564 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 MAGOHP61326 146 aaKnown RBP6.41□□□□□ -1.38
UBBP1-201ENST00000392399 CYP4F2P78329 520 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 RCN2Q14257 317 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 SLC9A5Q14940 896 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 NKG7Q16617 165 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 TOR1AIP1Q5JTV8 583 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 SWT1Q5T5J6 900 aaKnown RBP6.41□□□□□ -1.38
UBBP1-201ENST00000392399 KHDRBS2Q5VWX1 349 aaKnown RBP6.41□□□□□ -1.38
UBBP1-201ENST00000392399 TTC19Q6DKK2 380 aaPredicted RBP6.41□□□□□ -1.38
UBBP1-201ENST00000392399 LCN10Q6JVE6 187 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 TRIM40Q6P9F5 258 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 ABHD17CQ6PCB6 329 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 FAM198BQ6UWH4 519 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 GPRIN3Q6ZVF9 776 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 COX15Q7KZN9 410 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 VN1R5Q7Z5H4 357 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 VASH2Q86V25 355 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 NUDCD3Q8IVD9 361 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 KIRREL3Q8IZU9 778 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 ENDOVQ8N8Q3 282 aaKnown RBP6.41□□□□□ -1.38
UBBP1-201ENST00000392399 GBP7Q8N8V2 638 aaPredicted RBP6.41□□□□□ -1.38
UBBP1-201ENST00000392399 OR9A4Q8NGU2 314 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 OR2Y1Q8NGV0 311 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 HUS1BQ8NHY5 278 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 METTL6Q8TCB7 284 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 STT3BQ8TCJ2 826 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 ADAMTS18Q8TE60 1221 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 THAP4Q8WY91 577 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 STARD8Q92502 1023 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 CCT6BQ92526 530 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 RGMAQ96B86 450 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 MIEF2Q96C03 454 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 TLCD1Q96CP7 247 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 MS4A6EQ96DS6 147 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 MOCOSQ96EN8 888 aa6.41□□□□□ -1.38
UBBP1-201ENST00000392399 KCNC2Q96PR1 638 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms