RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 NPEPPSL1A6NEC2 478 aa15.8■□□□□ 0.12
SMN2-201ENST00000380741 CDC7O00311 574 aa15.8■□□□□ 0.12
SMN2-201ENST00000380741 MLYCDO95822 493 aa15.8■□□□□ 0.12
SMN2-201ENST00000380741 SP1P08047 785 aa15.8■□□□□ 0.12
SMN2-201ENST00000380741 ESRRAP11474 423 aaPredicted RBP15.8■□□□□ 0.12
SMN2-201ENST00000380741 MAOAP21397 527 aa15.8■□□□□ 0.12
SMN2-201ENST00000380741 SAT1P21673 171 aa15.8■□□□□ 0.12
SMN2-201ENST00000380741 TPP2P29144 1249 aaPredicted RBP15.8■□□□□ 0.12
SMN2-201ENST00000380741 ZNF630Q2M218 657 aaPredicted RBP15.8■□□□□ 0.12
SMN2-201ENST00000380741 KRTCAP3Q53RY4 240 aa15.8■□□□□ 0.12
SMN2-201ENST00000380741 SLC25A25Q6KCM7 469 aa15.8■□□□□ 0.12
SMN2-201ENST00000380741 NXPE4Q6UWF7 544 aa15.8■□□□□ 0.12
SMN2-201ENST00000380741 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.8■□□□□ 0.12
SMN2-201ENST00000380741 SPPL2CQ8IUH8 684 aa15.8■□□□□ 0.12
SMN2-201ENST00000380741 SIAH3Q8IW03 269 aa15.8■□□□□ 0.12
SMN2-201ENST00000380741 AIF1LQ9BQI0 150 aa15.8■□□□□ 0.12
SMN2-201ENST00000380741 KLHL31Q9H511 634 aa15.8■□□□□ 0.12
SMN2-201ENST00000380741 SLC22A14Q9Y267 594 aa15.8■□□□□ 0.12
SMN2-201ENST00000380741 PSAT1Q9Y617 370 aa15.8■□□□□ 0.12
SMN2-201ENST00000380741 TEP1Q99973 2627 aaKnown RBP15.8■□□□□ 0.12
SMN2-201ENST00000380741 IGKV3D-11A0A0A0MRZ8 115 aa15.79■□□□□ 0.12
SMN2-201ENST00000380741 TCRBV16S1A1N1A0A5B0 115 aa15.79■□□□□ 0.12
SMN2-201ENST00000380741 URADA6NGE7 173 aa15.79■□□□□ 0.12
SMN2-201ENST00000380741 SAGE2PA6NJ88 616 aa15.79■□□□□ 0.12
SMN2-201ENST00000380741 C4orf51C9J302 202 aa15.79■□□□□ 0.12
SMN2-201ENST00000380741 ZSCAN12O43309 604 aa15.79■□□□□ 0.12
SMN2-201ENST00000380741 SLC25A12O75746 678 aa15.79■□□□□ 0.12
SMN2-201ENST00000380741 SMIM10L1P0DMW3 83 aa15.79■□□□□ 0.12
SMN2-201ENST00000380741 ZNF460Q14592 562 aa15.79■□□□□ 0.12
SMN2-201ENST00000380741 RBBP5Q15291 538 aaKnown RBP15.79■□□□□ 0.12
SMN2-201ENST00000380741 MAPKAPK3Q16644 382 aa15.79■□□□□ 0.12
SMN2-201ENST00000380741 XKRXQ6PP77 449 aa15.79■□□□□ 0.12
SMN2-201ENST00000380741 Q6ZPB1 254 aaPredicted RBP15.79■□□□□ 0.12
SMN2-201ENST00000380741 ZNF227Q86WZ6 799 aa15.79■□□□□ 0.12
SMN2-201ENST00000380741 ANKMY2Q8IV38 441 aa15.79■□□□□ 0.12
SMN2-201ENST00000380741 FAM98AQ8NCA5 519 aaKnown RBP15.79■□□□□ 0.12
SMN2-201ENST00000380741 TRPV3Q8NET8 790 aa15.79■□□□□ 0.12
SMN2-201ENST00000380741 LRRC39Q96DD0 335 aa15.79■□□□□ 0.12
SMN2-201ENST00000380741 SMIM10Q96HG1 83 aa15.79■□□□□ 0.12
SMN2-201ENST00000380741 AICDAQ9GZX7 198 aa15.79■□□□□ 0.12
SMN2-201ENST00000380741 RHBGQ9H310 441 aa15.79■□□□□ 0.12
SMN2-201ENST00000380741 CLK4Q9HAZ1 481 aaKnown RBP15.79■□□□□ 0.12
SMN2-201ENST00000380741 CHST11Q9NPF2 352 aa15.79■□□□□ 0.12
SMN2-201ENST00000380741 ZFATQ9P243 1243 aa15.79■□□□□ 0.12
SMN2-201ENST00000380741 PSMD12O00232 456 aaPredicted RBP15.78■□□□□ 0.12
SMN2-201ENST00000380741 CDK2AP1O14519 115 aa15.78■□□□□ 0.12
SMN2-201ENST00000380741 ZNHIT1O43257 154 aa15.78■□□□□ 0.12
SMN2-201ENST00000380741 NME2P1O60361 137 aa15.78■□□□□ 0.12
SMN2-201ENST00000380741 SERPINA6P08185 405 aa15.78■□□□□ 0.12
SMN2-201ENST00000380741 SNRPB2P08579 225 aaKnown RBP15.78■□□□□ 0.12
SMN2-201ENST00000380741 RNH1P13489 461 aaKnown RBP15.78■□□□□ 0.12
SMN2-201ENST00000380741 TCP1P17987 556 aaKnown RBP15.78■□□□□ 0.12
SMN2-201ENST00000380741 NME2P22392 152 aa15.78■□□□□ 0.12
SMN2-201ENST00000380741 CYB561P49447 251 aa15.78■□□□□ 0.12
SMN2-201ENST00000380741 ITGA8P53708 1063 aa15.78■□□□□ 0.12
SMN2-201ENST00000380741 MLF1P58340 268 aa15.78■□□□□ 0.12
SMN2-201ENST00000380741 FRG1Q14331 258 aaKnown RBP15.78■□□□□ 0.12
SMN2-201ENST00000380741 TOR1AIP1Q5JTV8 583 aa15.78■□□□□ 0.12
SMN2-201ENST00000380741 RNFT1Q5M7Z0 435 aa15.78■□□□□ 0.12
SMN2-201ENST00000380741 ZC3HC1Q86WB0 502 aaKnown RBP15.78■□□□□ 0.12
SMN2-201ENST00000380741 KLHL7Q8IXQ5 586 aa15.78■□□□□ 0.12
SMN2-201ENST00000380741 CA13Q8N1Q1 262 aa15.78■□□□□ 0.12
SMN2-201ENST00000380741 CPSF7Q8N684 471 aaKnown RBP15.78■□□□□ 0.12
SMN2-201ENST00000380741 NFAM1Q8NET5 270 aaPredicted RBP15.78■□□□□ 0.12
SMN2-201ENST00000380741 ADAMTS18Q8TE60 1221 aa15.78■□□□□ 0.12
SMN2-201ENST00000380741 CREB3L4Q8TEY5 395 aa15.78■□□□□ 0.12
SMN2-201ENST00000380741 EGFL8Q99944 293 aa15.78■□□□□ 0.12
SMN2-201ENST00000380741 TRIM51Q9BSJ1 452 aa15.78■□□□□ 0.12
SMN2-201ENST00000380741 NECTIN3Q9NQS3 549 aa15.78■□□□□ 0.12
SMN2-201ENST00000380741 PRDM9Q9NQV7 894 aa15.78■□□□□ 0.12
SMN2-201ENST00000380741 TRMT1Q9NXH9 659 aaKnown RBP15.78■□□□□ 0.12
SMN2-201ENST00000380741 KCNE2Q9Y6J6 123 aa15.78■□□□□ 0.12
SMN2-201ENST00000380741 FAM95CA0A1B0GW59 222 aa15.77■□□□□ 0.12
SMN2-201ENST00000380741 A8MUA0 341 aa15.77■□□□□ 0.12
SMN2-201ENST00000380741 ASNA1O43681 348 aa15.77■□□□□ 0.12
SMN2-201ENST00000380741 ZNF24P17028 368 aa15.77■□□□□ 0.12
SMN2-201ENST00000380741 AGAP20933 346 aa15.77■□□□□ 0.12
SMN2-201ENST00000380741 PTGER4P35408 488 aa15.77■□□□□ 0.12
SMN2-201ENST00000380741 SMSP52788 366 aa15.77■□□□□ 0.12
SMN2-201ENST00000380741 ARL4CP56559 192 aa15.77■□□□□ 0.12
SMN2-201ENST00000380741 TAS2R39P59534 338 aa15.77■□□□□ 0.12
SMN2-201ENST00000380741 CDKL1Q00532 357 aa15.77■□□□□ 0.12
SMN2-201ENST00000380741 HSF1Q00613 529 aa15.77■□□□□ 0.12
SMN2-201ENST00000380741 DR1Q01658 176 aa15.77■□□□□ 0.12
SMN2-201ENST00000380741 FASTKD3Q14CZ7 662 aaKnown RBP15.77■□□□□ 0.12
SMN2-201ENST00000380741 CDSNQ15517 529 aa15.77■□□□□ 0.12
SMN2-201ENST00000380741 SYDE1Q6ZW31 735 aaPredicted RBP15.77■□□□□ 0.12
SMN2-201ENST00000380741 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.77■□□□□ 0.12
SMN2-201ENST00000380741 NKAPQ8N5F7 415 aaKnown RBP15.77■□□□□ 0.12
SMN2-201ENST00000380741 ANKRD49Q8WVL7 239 aa15.77■□□□□ 0.12
SMN2-201ENST00000380741 ANKRD7Q92527 254 aa15.77■□□□□ 0.12
SMN2-201ENST00000380741 CAPZA3Q96KX2 299 aa15.77■□□□□ 0.12
SMN2-201ENST00000380741 TRIM45Q9H8W5 580 aaPredicted RBP15.77■□□□□ 0.12
SMN2-201ENST00000380741 MEMO1Q9Y316 297 aa15.77■□□□□ 0.12
SMN2-201ENST00000380741 OARD1Q9Y530 152 aa15.77■□□□□ 0.12
SMN2-201ENST00000380741 AKAP9Q99996 3911 aa15.77■□□□□ 0.11
SMN2-201ENST00000380741 TP73O15350 636 aa15.76■□□□□ 0.11
SMN2-201ENST00000380741 SEC31AO94979 1220 aaKnown RBP15.76■□□□□ 0.11
SMN2-201ENST00000380741 COX6B1P14854 86 aa15.76■□□□□ 0.11
SMN2-201ENST00000380741 ABOP16442 354 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms