RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 CEACAM7Q14002 265 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 FAHD2BQ6P2I3 314 aaPredicted RBP4.77□□□□□ -1.65
PCDH9-201ENST00000377861 RASSF6Q6ZTQ3 369 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 SLC25A41Q8N5S1 370 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 FAHD2AQ96GK7 314 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 POLDIP3Q9BY77 421 aaKnown RBP4.77□□□□□ -1.65
PCDH9-201ENST00000377861 POLR3BQ9NW08 1133 aaPredicted RBP4.77□□□□□ -1.65
PCDH9-201ENST00000377861 TMEM129A0AVI4 362 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 SLC35F4A4IF30 521 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 PCGF2P35227 344 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 GPR176Q14439 515 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 S100A7AQ86SG5 101 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 CEP97Q8IW35 865 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 RAET1EQ8TD07 263 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 SYT3Q9BQG1 590 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 GHRLQ9UBU3 117 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 PREX1Q8TCU6 1659 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 GLTPD2A6NH11 291 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 SRP54P61011 504 aaKnown RBP4.77□□□□□ -1.65
PCDH9-201ENST00000377861 ARHGAP1Q07960 439 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 OR9A1PQ8NGU1 263 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 OR10A6Q8NH74 314 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 NSMAFQ92636 917 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 RSPH9Q9H1X1 276 aaPredicted RBP4.77□□□□□ -1.65
PCDH9-201ENST00000377861 PCYT1BQ9Y5K3 369 aaPredicted RBP4.77□□□□□ -1.65
PCDH9-201ENST00000377861 VTNP04004 478 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 MTNR1AP48039 350 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 SLC5A3P53794 718 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 CEP76Q8TAP6 659 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 SCPEP1Q9HB40 452 aa4.77□□□□□ -1.65
PCDH9-201ENST00000377861 ABI2Q9NYB9 513 aaPredicted RBP4.77□□□□□ -1.65
PCDH9-201ENST00000377861 TMEM102Q8N9M5 508 aaPredicted RBP4.76□□□□□ -1.65
PCDH9-201ENST00000377861 WACQ9BTA9 647 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 SMOXQ9NWM0 555 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 QPCTLQ9NXS2 382 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 MRPS17Q9Y2R5 130 aaKnown RBP4.76□□□□□ -1.65
PCDH9-201ENST00000377861 CMAHPQ9Y471 501 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 IQCMA0A1B0GVH7 501 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 GFYI3L273 518 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 STBD1O95210 358 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 FCER2P06734 321 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 DBIP07108 87 aaKnown RBP4.76□□□□□ -1.65
PCDH9-201ENST00000377861 VGLL4Q14135 290 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 ZNF454Q8N9F8 522 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 KCNS3Q9BQ31 491 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 MARCH7Q9H992 704 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 VAPAQ9P0L0 249 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 DEC1Q9P2X7 70 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 PRELID3BQ9Y3B1 194 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 IST1P53990 364 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 SLAIN1Q8ND83 568 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 SFXN5Q8TD22 340 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 GTF2H4Q92759 462 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 TAAR5O14804 337 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 BCAS1O75363 584 aaPredicted RBP4.76□□□□□ -1.65
PCDH9-201ENST00000377861 IDH2P48735 452 aaKnown RBP4.76□□□□□ -1.65
PCDH9-201ENST00000377861 DLX5P56178 289 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 LLGL1Q15334 1064 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 PIGVQ9NUD9 493 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 NUBP2Q9Y5Y2 271 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 ETV7Q9Y603 341 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 RBBP9O75884 186 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 POU2F2P09086 479 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 WEE1P30291 646 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 KDM4DQ6B0I6 523 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 AMIGO2Q86SJ2 522 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 TOMM5Q8N4H5 51 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 FIBCD1Q8N539 461 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 GABARAPL1Q9H0R8 117 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 SLC6A5Q9Y345 797 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 RNGTTO60942 597 aaKnown RBP4.76□□□□□ -1.65
PCDH9-201ENST00000377861 TIPRLO75663 272 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 CPSF6Q16630 551 aaKnown RBP eCLIP4.76□□□□□ -1.65
PCDH9-201ENST00000377861 C15orf59Q2T9L4 293 aaPredicted RBP4.76□□□□□ -1.65
PCDH9-201ENST00000377861 EMC4Q5J8M3 183 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 C16orf59Q7L2K0 433 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 SLC51AQ86UW1 340 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 SERPINA9Q86WD7 417 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 PELI3Q8N2H9 469 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 DUSP18Q8NEJ0 188 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 ABHD11Q8NFV4 315 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 IL1RL2Q9HB29 575 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 C1orf226A1L170 272 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 GLULP15104 373 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 PRICKLE2Q7Z3G6 844 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 CDH26Q8IXH8 852 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 CENPSQ8N2Z9 138 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 ZNF559Q9BR84 538 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 XKRYO14609 159 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 PGLSO95336 258 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 WDR5P61964 334 aaKnown RBP4.76□□□□□ -1.65
PCDH9-201ENST00000377861 SH3BP2P78314 561 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 RTP2Q5QGT7 225 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 ALPK1Q96QP1 1244 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 TTYH2Q9BSA4 534 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 ALX4Q9H161 411 aaPredicted RBP4.76□□□□□ -1.65
PCDH9-201ENST00000377861 TOR3AQ9H497 397 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 IL17CQ9P0M4 197 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 OR6A2O95222 327 aa4.76□□□□□ -1.65
PCDH9-201ENST00000377861 ZNF3P17036 446 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms