RNA–Protein interactions for RNA: ENST00000375446.4

NINJ1-201, Transcript of ninjurin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NINJ1, Length 1,281 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-201ENST00000375446 SMAD5Q99717 465 aaKnown RBP20.55■□□□□ 0.88
NINJ1-201ENST00000375446 MRPL57Q9BQC6 102 aaKnown RBP20.55■□□□□ 0.88
NINJ1-201ENST00000375446 RBCK1Q9BYM8 510 aa20.55■□□□□ 0.88
NINJ1-201ENST00000375446 ZNF160Q9HCG1 818 aa20.55■□□□□ 0.88
NINJ1-201ENST00000375446 TMCO1Q9UM00 188 aa20.55■□□□□ 0.88
NINJ1-201ENST00000375446 LOC102723996A0A087X1L8 192 aa20.54■□□□□ 0.88
NINJ1-201ENST00000375446 SIX3O95343 332 aaPredicted RBP20.54■□□□□ 0.88
NINJ1-201ENST00000375446 C8orf89P0DMQ9 161 aa20.54■□□□□ 0.88
NINJ1-201ENST00000375446 BTN3A2P78410 334 aa20.54■□□□□ 0.88
NINJ1-201ENST00000375446 METTL2BQ6P1Q9 378 aaKnown RBP20.54■□□□□ 0.88
NINJ1-201ENST00000375446 CNPY4Q8N129 248 aa20.54■□□□□ 0.88
NINJ1-201ENST00000375446 UBE2E3Q969T4 207 aa20.54■□□□□ 0.88
NINJ1-201ENST00000375446 TBC1D20Q96BZ9 403 aa20.54■□□□□ 0.88
NINJ1-201ENST00000375446 MS4A6EQ96DS6 147 aa20.54■□□□□ 0.88
NINJ1-201ENST00000375446 MRPL46Q9H2W6 279 aaKnown RBP20.54■□□□□ 0.88
NINJ1-201ENST00000375446 ZNF552Q9H707 407 aaPredicted RBP20.54■□□□□ 0.88
NINJ1-201ENST00000375446 LANCL2Q9NS86 450 aa20.54■□□□□ 0.88
NINJ1-201ENST00000375446 IGHV1-45A0A0A0MS14 117 aa20.53■□□□□ 0.88
NINJ1-201ENST00000375446 NSG1A0A0A6YYJ2 146 aa20.53■□□□□ 0.88
NINJ1-201ENST00000375446 OR2W5A6NFC9 320 aa20.53■□□□□ 0.88
NINJ1-201ENST00000375446 ERI3O43414 337 aaKnown RBP20.53■□□□□ 0.88
NINJ1-201ENST00000375446 SMIM24O75264 130 aa20.53■□□□□ 0.88
NINJ1-201ENST00000375446 SLU7O95391 586 aaKnown RBP20.53■□□□□ 0.88
NINJ1-201ENST00000375446 TBX6O95947 436 aaPredicted RBP20.53■□□□□ 0.88
NINJ1-201ENST00000375446 ALPPP05187 535 aa20.53■□□□□ 0.88
NINJ1-201ENST00000375446 FHP07954 510 aa20.53■□□□□ 0.88
NINJ1-201ENST00000375446 HPDP32754 393 aaPredicted RBP20.53■□□□□ 0.88
NINJ1-201ENST00000375446 CASRP41180 1078 aa20.53■□□□□ 0.88
NINJ1-201ENST00000375446 PIK3CGP48736 1102 aa20.53■□□□□ 0.88
NINJ1-201ENST00000375446 ADPRMQ3LIE5 342 aa20.53■□□□□ 0.88
NINJ1-201ENST00000375446 COLEC12Q5KU26 742 aa20.53■□□□□ 0.88
NINJ1-201ENST00000375446 IRAK1BP1Q5VVH5 260 aa20.53■□□□□ 0.88
NINJ1-201ENST00000375446 GRHL2Q6ISB3 625 aa20.53■□□□□ 0.88
NINJ1-201ENST00000375446 MED27Q6P2C8 311 aa20.53■□□□□ 0.88
NINJ1-201ENST00000375446 GOLGA7Q7Z5G4 137 aa20.53■□□□□ 0.88
NINJ1-201ENST00000375446 HPS6Q86YV9 775 aa20.53■□□□□ 0.88
NINJ1-201ENST00000375446 LAS2Q8IYD9 372 aa20.53■□□□□ 0.88
NINJ1-201ENST00000375446 PHF21BQ96EK2 531 aa20.53■□□□□ 0.88
NINJ1-201ENST00000375446 FAR2Q96K12 515 aa20.53■□□□□ 0.88
NINJ1-201ENST00000375446 ZNF700Q9H0M5 742 aa20.53■□□□□ 0.88
NINJ1-201ENST00000375446 C5AR2Q9P296 337 aa20.53■□□□□ 0.88
NINJ1-201ENST00000375446 A0A0G2JN53 185 aa20.52■□□□□ 0.88
NINJ1-201ENST00000375446 STX16-NPEPL1H3BU86 382 aa20.52■□□□□ 0.88
NINJ1-201ENST00000375446 E2F3O00716 465 aa20.52■□□□□ 0.88
NINJ1-201ENST00000375446 STX16O14662 325 aa20.52■□□□□ 0.88
NINJ1-201ENST00000375446 SHBGP04278 402 aa20.52■□□□□ 0.88
NINJ1-201ENST00000375446 EEF1DP29692 281 aaKnown RBP20.52■□□□□ 0.88
NINJ1-201ENST00000375446 Q0VFX4 171 aa20.52■□□□□ 0.88
NINJ1-201ENST00000375446 GTF2H2Q13888 395 aa20.52■□□□□ 0.88
NINJ1-201ENST00000375446 GTF2H2CQ6P1K8 395 aa20.52■□□□□ 0.88
NINJ1-201ENST00000375446 MYLK4Q86YV6 388 aaPredicted RBP20.52■□□□□ 0.88
NINJ1-201ENST00000375446 OR2L5Q8NG80 312 aa20.52■□□□□ 0.88
NINJ1-201ENST00000375446 OR7G3Q8NG95 312 aa20.52■□□□□ 0.88
NINJ1-201ENST00000375446 REXO4Q9GZR2 422 aaKnown RBP20.52■□□□□ 0.88
NINJ1-201ENST00000375446 LHPPQ9H008 270 aa20.52■□□□□ 0.88
NINJ1-201ENST00000375446 ACTR8Q9H981 624 aa20.52■□□□□ 0.88
NINJ1-201ENST00000375446 PRM3Q9NNZ6 103 aa20.52■□□□□ 0.88
NINJ1-201ENST00000375446 RIC8BQ9NVN3 520 aa20.52■□□□□ 0.88
NINJ1-201ENST00000375446 C19orf25Q9UFG5 118 aaPredicted RBP20.52■□□□□ 0.88
NINJ1-201ENST00000375446 TBK1Q9UHD2 729 aa20.52■□□□□ 0.88
NINJ1-201ENST00000375446 SCN3AQ9NY46 2000 aa20.52■□□□□ 0.88
NINJ1-201ENST00000375446 DPM1O60762 260 aa20.51■□□□□ 0.87
NINJ1-201ENST00000375446 CDC123O75794 336 aaPredicted RBP20.51■□□□□ 0.87
NINJ1-201ENST00000375446 PCNAP12004 261 aa20.51■□□□□ 0.87
NINJ1-201ENST00000375446 RNH1P13489 461 aaKnown RBP20.51■□□□□ 0.87
NINJ1-201ENST00000375446 JAK1P23458 1154 aa20.51■□□□□ 0.87
NINJ1-201ENST00000375446 PLA2G16P53816 162 aa20.51■□□□□ 0.87
NINJ1-201ENST00000375446 VSNL1P62760 191 aa20.51■□□□□ 0.87
NINJ1-201ENST00000375446 RHAGQ02094 409 aa20.51■□□□□ 0.87
NINJ1-201ENST00000375446 PCOLCEQ15113 449 aa20.51■□□□□ 0.87
NINJ1-201ENST00000375446 LIPJQ5W064 366 aa20.51■□□□□ 0.87
NINJ1-201ENST00000375446 LANCL3Q6ZV70 420 aa20.51■□□□□ 0.87
NINJ1-201ENST00000375446 LCA5Q86VQ0 697 aa20.51■□□□□ 0.87
NINJ1-201ENST00000375446 KBTBD2Q8IY47 623 aa20.51■□□□□ 0.87
NINJ1-201ENST00000375446 TMEM151AQ8N4L1 468 aa20.51■□□□□ 0.87
NINJ1-201ENST00000375446 PLPP5Q8NEB5 264 aa20.51■□□□□ 0.87
NINJ1-201ENST00000375446 ACMSDQ8TDX5 336 aa20.51■□□□□ 0.87
NINJ1-201ENST00000375446 ZNF473Q8WTR7 871 aaKnown RBP20.51■□□□□ 0.87
NINJ1-201ENST00000375446 MZB1Q8WU39 189 aa20.51■□□□□ 0.87
NINJ1-201ENST00000375446 THOC3Q96J01 351 aaKnown RBP20.51■□□□□ 0.87
NINJ1-201ENST00000375446 QRFPRQ96P65 431 aa20.51■□□□□ 0.87
NINJ1-201ENST00000375446 F2RL3Q96RI0 385 aa20.51■□□□□ 0.87
NINJ1-201ENST00000375446 IPPKQ9H8X2 491 aa20.51■□□□□ 0.87
NINJ1-201ENST00000375446 A0A088AWK7 358 aa20.5■□□□□ 0.87
NINJ1-201ENST00000375446 PSMD12O00232 456 aaPredicted RBP20.5■□□□□ 0.87
NINJ1-201ENST00000375446 B4GALT2O60909 372 aa20.5■□□□□ 0.87
NINJ1-201ENST00000375446 SBK3P0C264 359 aa20.5■□□□□ 0.87
NINJ1-201ENST00000375446 ZNF10P21506 573 aaPredicted RBP20.5■□□□□ 0.87
NINJ1-201ENST00000375446 SERPINB1P30740 379 aa20.5■□□□□ 0.87
NINJ1-201ENST00000375446 TGM3Q08188 693 aa20.5■□□□□ 0.87
NINJ1-201ENST00000375446 ABRAXAS2Q15018 415 aa20.5■□□□□ 0.87
NINJ1-201ENST00000375446 NADK2Q4G0N4 442 aa20.5■□□□□ 0.87
NINJ1-201ENST00000375446 TRIM40Q6P9F5 258 aa20.5■□□□□ 0.87
NINJ1-201ENST00000375446 ABHD17CQ6PCB6 329 aa20.5■□□□□ 0.87
NINJ1-201ENST00000375446 CPEB2Q7Z5Q1 589 aaKnown RBP20.5■□□□□ 0.87
NINJ1-201ENST00000375446 ANKRD37Q7Z713 158 aa20.5■□□□□ 0.87
NINJ1-201ENST00000375446 CA13Q8N1Q1 262 aa20.5■□□□□ 0.87
NINJ1-201ENST00000375446 NPLQ9BXD5 320 aaPredicted RBP20.5■□□□□ 0.87
NINJ1-201ENST00000375446 MS4A8Q9BY19 250 aa20.5■□□□□ 0.87
NINJ1-201ENST00000375446 EPN3Q9H201 632 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms