RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 MRPS30Q9NP92 439 aaKnown RBP17.2■□□□□ 0.34
HLA-DQB1-201ENST00000374943 TRNAU1APQ9NX07 287 aaKnown RBP17.2■□□□□ 0.34
HLA-DQB1-201ENST00000374943 OR6C2Q9NZP2 312 aa17.2■□□□□ 0.34
HLA-DQB1-201ENST00000374943 SAMD4AQ9UPU9 718 aaKnown RBP17.2■□□□□ 0.34
HLA-DQB1-201ENST00000374943 A6NCN8 305 aa17.2■□□□□ 0.34
HLA-DQB1-201ENST00000374943 PDLIM1O00151 329 aa17.2■□□□□ 0.34
HLA-DQB1-201ENST00000374943 SERPINA1P01009 418 aa17.2■□□□□ 0.34
HLA-DQB1-201ENST00000374943 C1QCP02747 245 aa17.2■□□□□ 0.34
HLA-DQB1-201ENST00000374943 MT-ND1P03886 318 aa17.2■□□□□ 0.34
HLA-DQB1-201ENST00000374943 DDX5P17844 614 aaKnown RBP17.2■□□□□ 0.34
HLA-DQB1-201ENST00000374943 ADRM1Q16186 407 aa17.2■□□□□ 0.34
HLA-DQB1-201ENST00000374943 MPEG1Q2M385 716 aa17.2■□□□□ 0.34
HLA-DQB1-201ENST00000374943 TMEM31Q5JXX7 168 aa17.2■□□□□ 0.34
HLA-DQB1-201ENST00000374943 ABI3BPQ7Z7G0 1075 aa17.2■□□□□ 0.34
HLA-DQB1-201ENST00000374943 NUDT13Q86X67 352 aa17.2■□□□□ 0.34
HLA-DQB1-201ENST00000374943 OR2L3Q8NG85 312 aa17.2■□□□□ 0.34
HLA-DQB1-201ENST00000374943 CNBD2Q96M20 576 aa17.2■□□□□ 0.34
HLA-DQB1-201ENST00000374943 GAS2L1Q99501 681 aaPredicted RBP17.2■□□□□ 0.34
HLA-DQB1-201ENST00000374943 SORBS1Q9BX66 1292 aaKnown RBP17.2■□□□□ 0.34
HLA-DQB1-201ENST00000374943 ANKRD60Q9BZ19 345 aa17.2■□□□□ 0.34
HLA-DQB1-201ENST00000374943 TWSG1Q9GZX9 223 aa17.2■□□□□ 0.34
HLA-DQB1-201ENST00000374943 LHX9Q9NQ69 397 aa17.2■□□□□ 0.34
HLA-DQB1-201ENST00000374943 DNAJB9Q9UBS3 223 aa17.2■□□□□ 0.34
HLA-DQB1-201ENST00000374943 RNF103-CHMP3A0A140T963 221 aa17.19■□□□□ 0.34
HLA-DQB1-201ENST00000374943 DPPA5A6NC42 116 aa17.19■□□□□ 0.34
HLA-DQB1-201ENST00000374943 CHURC1-FNTBB4DL54 471 aa17.19■□□□□ 0.34
HLA-DQB1-201ENST00000374943 PRAMEF26H0Y7S4 382 aa17.19■□□□□ 0.34
HLA-DQB1-201ENST00000374943 SCAMP1O15126 338 aa17.19■□□□□ 0.34
HLA-DQB1-201ENST00000374943 LCMT2O60294 686 aaKnown RBP17.19■□□□□ 0.34
HLA-DQB1-201ENST00000374943 EML2O95834 649 aa17.19■□□□□ 0.34
HLA-DQB1-201ENST00000374943 IGHV4-34P06331 123 aa17.19■□□□□ 0.34
HLA-DQB1-201ENST00000374943 DDCP20711 480 aa17.19■□□□□ 0.34
HLA-DQB1-201ENST00000374943 EFNA1P20827 205 aaPredicted RBP17.19■□□□□ 0.34
HLA-DQB1-201ENST00000374943 CD72P21854 359 aa17.19■□□□□ 0.34
HLA-DQB1-201ENST00000374943 AK4P27144 223 aaPredicted RBP17.19■□□□□ 0.34
HLA-DQB1-201ENST00000374943 GRK3P35626 688 aa17.19■□□□□ 0.34
HLA-DQB1-201ENST00000374943 AHRP35869 848 aa17.19■□□□□ 0.34
HLA-DQB1-201ENST00000374943 RABIFP47224 123 aa17.19■□□□□ 0.34
HLA-DQB1-201ENST00000374943 ARFIP1P53367 373 aa17.19■□□□□ 0.34
HLA-DQB1-201ENST00000374943 MAPK12P53778 367 aa17.19■□□□□ 0.34
HLA-DQB1-201ENST00000374943 SRP54P61011 504 aaKnown RBP17.19■□□□□ 0.34
HLA-DQB1-201ENST00000374943 TRA2BP62995 288 aaKnown RBP17.19■□□□□ 0.34
HLA-DQB1-201ENST00000374943 HBA1P69905 142 aa17.19■□□□□ 0.34
HLA-DQB1-201ENST00000374943 TFF2Q03403 129 aa17.19■□□□□ 0.34
HLA-DQB1-201ENST00000374943 TDGQ13569 410 aa17.19■□□□□ 0.34
HLA-DQB1-201ENST00000374943 ZIC1Q15915 447 aa17.19■□□□□ 0.34
HLA-DQB1-201ENST00000374943 ALG11Q2TAA5 492 aa17.19■□□□□ 0.34
HLA-DQB1-201ENST00000374943 TMEM35AQ53FP2 167 aa17.19■□□□□ 0.34
HLA-DQB1-201ENST00000374943 ADGRF3Q8IZF5 1079 aa17.19■□□□□ 0.34
HLA-DQB1-201ENST00000374943 TRIML2Q8N7C3 387 aa17.19■□□□□ 0.34
HLA-DQB1-201ENST00000374943 FAM47BQ8NA70 645 aa17.19■□□□□ 0.34
HLA-DQB1-201ENST00000374943 TFAP2CQ92754 450 aa17.19■□□□□ 0.34
HLA-DQB1-201ENST00000374943 TSACCQ96A04 125 aaPredicted RBP17.19■□□□□ 0.34
HLA-DQB1-201ENST00000374943 PYURFQ96I23 114 aa17.19■□□□□ 0.34
HLA-DQB1-201ENST00000374943 VPS50Q96JG6 964 aa17.19■□□□□ 0.34
HLA-DQB1-201ENST00000374943 DDX31Q9H8H2 851 aaKnown RBP17.19■□□□□ 0.34
HLA-DQB1-201ENST00000374943 SPASTQ9UBP0 616 aa17.19■□□□□ 0.34
HLA-DQB1-201ENST00000374943 PNMA8BQ9ULN7 279 aaPredicted RBP17.19■□□□□ 0.34
HLA-DQB1-201ENST00000374943 NDRG2Q9UN36 371 aaKnown RBP17.19■□□□□ 0.34
HLA-DQB1-201ENST00000374943 PCDHGB4Q9UN71 923 aa17.19■□□□□ 0.34
HLA-DQB1-201ENST00000374943 DGKBQ9Y6T7 804 aa17.19■□□□□ 0.34
HLA-DQB1-201ENST00000374943 PRAMEF33A0A0G2JMD5 474 aa17.18■□□□□ 0.34
HLA-DQB1-201ENST00000374943 EI24O14681 340 aa17.18■□□□□ 0.34
HLA-DQB1-201ENST00000374943 C6orf47O95873 294 aa17.18■□□□□ 0.34
HLA-DQB1-201ENST00000374943 CHRNB1P11230 501 aa17.18■□□□□ 0.34
HLA-DQB1-201ENST00000374943 CMPK1P30085 196 aa17.18■□□□□ 0.34
HLA-DQB1-201ENST00000374943 MAGEA2P43356 314 aa17.18■□□□□ 0.34
HLA-DQB1-201ENST00000374943 RGNQ15493 299 aa17.18■□□□□ 0.34
HLA-DQB1-201ENST00000374943 KIAA0895LQ68EN5 471 aa17.18■□□□□ 0.34
HLA-DQB1-201ENST00000374943 Q6ZS52 159 aa17.18■□□□□ 0.34
HLA-DQB1-201ENST00000374943 SYT13Q7L8C5 426 aa17.18■□□□□ 0.34
HLA-DQB1-201ENST00000374943 ADCK2Q7Z695 626 aa17.18■□□□□ 0.34
HLA-DQB1-201ENST00000374943 UBE3DQ7Z6J8 389 aa17.18■□□□□ 0.34
HLA-DQB1-201ENST00000374943 ST13P4Q8IZP2 240 aaPredicted RBP17.18■□□□□ 0.34
HLA-DQB1-201ENST00000374943 ZNF687Q8N1G0 1237 aa17.18■□□□□ 0.34
HLA-DQB1-201ENST00000374943 TBC1D19Q8N5T2 526 aa17.18■□□□□ 0.34
HLA-DQB1-201ENST00000374943 CIDECQ96AQ7 238 aaPredicted RBP17.18■□□□□ 0.34
HLA-DQB1-201ENST00000374943 TM4SF18Q96CE8 201 aa17.18■□□□□ 0.34
HLA-DQB1-201ENST00000374943 TMEM168Q9H0V1 697 aa17.18■□□□□ 0.34
HLA-DQB1-201ENST00000374943 ZNF696Q9H7X3 374 aa17.18■□□□□ 0.34
HLA-DQB1-201ENST00000374943 MIEF1Q9NQG6 463 aa17.18■□□□□ 0.34
HLA-DQB1-201ENST00000374943 TAAR2Q9P1P5 351 aa17.18■□□□□ 0.34
HLA-DQB1-201ENST00000374943 ZNF624Q9P2J8 865 aaPredicted RBP17.18■□□□□ 0.34
HLA-DQB1-201ENST00000374943 KLF15Q9UIH9 416 aa17.18■□□□□ 0.34
HLA-DQB1-201ENST00000374943 DMTF1Q9Y222 760 aa17.18■□□□□ 0.34
HLA-DQB1-201ENST00000374943 TNFAIP8O95379 198 aa17.17■□□□□ 0.34
HLA-DQB1-201ENST00000374943 CHRM5P08912 532 aaPredicted RBP17.17■□□□□ 0.34
HLA-DQB1-201ENST00000374943 FAM58BPP0C7Q3 252 aa17.17■□□□□ 0.34
HLA-DQB1-201ENST00000374943 F3P13726 295 aa17.17■□□□□ 0.34
HLA-DQB1-201ENST00000374943 ZNF23P17027 643 aa17.17■□□□□ 0.34
HLA-DQB1-201ENST00000374943 PCGF2P35227 344 aa17.17■□□□□ 0.34
HLA-DQB1-201ENST00000374943 NUDT1P36639 197 aa17.17■□□□□ 0.34
HLA-DQB1-201ENST00000374943 BCL6P41182 706 aa17.17■□□□□ 0.34
HLA-DQB1-201ENST00000374943 ACTR1BP42025 376 aa17.17■□□□□ 0.34
HLA-DQB1-201ENST00000374943 MVDP53602 400 aa17.17■□□□□ 0.34
HLA-DQB1-201ENST00000374943 ACTR1AP61163 376 aa17.17■□□□□ 0.34
HLA-DQB1-201ENST00000374943 HEPACAMQ14CZ8 416 aa17.17■□□□□ 0.34
HLA-DQB1-201ENST00000374943 SMAD2Q15796 467 aaKnown RBP17.17■□□□□ 0.34
HLA-DQB1-201ENST00000374943 PRSS53Q2L4Q9 553 aa17.17■□□□□ 0.34
HLA-DQB1-201ENST00000374943 ADPRMQ3LIE5 342 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms