RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 MOB2Q70IA6 237 aa15.16■□□□□ 0.02
RTN3-205ENST00000356000 FAM217AQ8IXS0 508 aa15.16■□□□□ 0.02
RTN3-205ENST00000356000 ARL6IP6Q8N6S5 226 aa15.16■□□□□ 0.02
RTN3-205ENST00000356000 KIF12Q96FN5 646 aa15.16■□□□□ 0.02
RTN3-205ENST00000356000 MRIQ9BWK5 157 aa15.16■□□□□ 0.02
RTN3-205ENST00000356000 ANKRA2Q9H9E1 313 aa15.16■□□□□ 0.02
RTN3-205ENST00000356000 DNAJC11Q9NVH1 559 aa15.16■□□□□ 0.02
RTN3-205ENST00000356000 A0A1B0GVI7 797 aa15.15■□□□□ 0.02
RTN3-205ENST00000356000 HYKKA2RU49 373 aa15.15■□□□□ 0.02
RTN3-205ENST00000356000 ISM1B1AKI9 464 aa15.15■□□□□ 0.02
RTN3-205ENST00000356000 CDRT1O95170 752 aa15.15■□□□□ 0.02
RTN3-205ENST00000356000 HTR3BO95264 441 aa15.15■□□□□ 0.02
RTN3-205ENST00000356000 PAMP19021 973 aa15.15■□□□□ 0.02
RTN3-205ENST00000356000 PSMA1P25786 263 aaKnown RBP15.15■□□□□ 0.02
RTN3-205ENST00000356000 HNMTP50135 292 aa15.15■□□□□ 0.02
RTN3-205ENST00000356000 CYP4F8P98187 520 aa15.15■□□□□ 0.02
RTN3-205ENST00000356000 HNRNPA0Q13151 305 aaKnown RBP15.15■□□□□ 0.02
RTN3-205ENST00000356000 PAFAH1B3Q15102 231 aaKnown RBP15.15■□□□□ 0.02
RTN3-205ENST00000356000 RAB11FIP2Q7L804 512 aa15.15■□□□□ 0.02
RTN3-205ENST00000356000 OR1M1Q8NGA1 313 aa15.15■□□□□ 0.02
RTN3-205ENST00000356000 OR2T11Q8NH01 316 aa15.15■□□□□ 0.02
RTN3-205ENST00000356000 ERMAPQ96PL5 475 aaPredicted RBP15.15■□□□□ 0.02
RTN3-205ENST00000356000 H2AFJQ9BTM1 129 aa15.15■□□□□ 0.02
RTN3-205ENST00000356000 NUSAP1Q9BXS6 441 aaKnown RBP15.15■□□□□ 0.02
RTN3-205ENST00000356000 EQTNQ9NQ60 294 aa15.15■□□□□ 0.02
RTN3-205ENST00000356000 TCEAL9Q9UHQ7 104 aa15.15■□□□□ 0.02
RTN3-205ENST00000356000 FBXL2Q9UKC9 423 aa15.15■□□□□ 0.02
RTN3-205ENST00000356000 TMEM82A0PJX8 343 aa15.15■□□□□ 0.02
RTN3-205ENST00000356000 LZTS3O60299 673 aaPredicted RBP15.15■□□□□ 0.02
RTN3-205ENST00000356000 EIF3GO75821 320 aaKnown RBP eCLIP15.15■□□□□ 0.021e-11■■■□□ 15.7
RTN3-205ENST00000356000 HAPLN1P10915 354 aaPredicted RBP15.15■□□□□ 0.02
RTN3-205ENST00000356000 CXCL3P19876 107 aa15.15■□□□□ 0.02
RTN3-205ENST00000356000 SLC6A1P30531 599 aa15.15■□□□□ 0.02
RTN3-205ENST00000356000 FGL2Q14314 439 aa15.15■□□□□ 0.02
RTN3-205ENST00000356000 ZNF667Q5HYK9 610 aa15.15■□□□□ 0.02
RTN3-205ENST00000356000 C6orf136Q5SQH8 315 aa15.15■□□□□ 0.02
RTN3-205ENST00000356000 METAP1DQ6UB28 335 aaPredicted RBP15.15■□□□□ 0.02
RTN3-205ENST00000356000 TMEM207Q6UWW9 146 aa15.15■□□□□ 0.02
RTN3-205ENST00000356000 C3P1Q6ZMU1 363 aa15.15■□□□□ 0.02
RTN3-205ENST00000356000 KRT74Q7RTS7 529 aa15.15■□□□□ 0.02
RTN3-205ENST00000356000 CCDC117Q8IWD4 279 aaPredicted RBP15.15■□□□□ 0.02
RTN3-205ENST00000356000 DENND6BQ8NEG7 585 aa15.15■□□□□ 0.02
RTN3-205ENST00000356000 SETD7Q8WTS6 366 aaKnown RBP15.15■□□□□ 0.02
RTN3-205ENST00000356000 TCEAL3Q969E4 200 aa15.15■□□□□ 0.02
RTN3-205ENST00000356000 PGAP3Q96FM1 320 aaPredicted RBP15.15■□□□□ 0.02
RTN3-205ENST00000356000 ZNF599Q96NL3 588 aa15.15■□□□□ 0.02
RTN3-205ENST00000356000 ARHGAP39Q9C0H5 1083 aa15.15■□□□□ 0.02
RTN3-205ENST00000356000 C8orf33Q9H7E9 229 aaPredicted RBP15.15■□□□□ 0.02
RTN3-205ENST00000356000 ZNF226Q9NYT6 803 aa15.15■□□□□ 0.02
RTN3-205ENST00000356000 SIP14410 1827 aa15.15■□□□□ 0.02
RTN3-205ENST00000356000 TRIP11Q15643 1979 aa15.15■□□□□ 0.02
RTN3-205ENST00000356000 FAM220BPB1ANY3 271 aa15.14■□□□□ 0.01
RTN3-205ENST00000356000 CRCPO75575 148 aa15.14■□□□□ 0.01
RTN3-205ENST00000356000 DHFRP00374 187 aa15.14■□□□□ 0.01
RTN3-205ENST00000356000 NFKB1P19838 968 aa15.14■□□□□ 0.01
RTN3-205ENST00000356000 MXD1Q05195 221 aa15.14■□□□□ 0.01
RTN3-205ENST00000356000 LCP2Q13094 533 aa15.14■□□□□ 0.01
RTN3-205ENST00000356000 PLD1Q13393 1074 aa15.14■□□□□ 0.01
RTN3-205ENST00000356000 SPDYE7PQ495Y7 208 aa15.14■□□□□ 0.01
RTN3-205ENST00000356000 ZNF789Q5FWF6 425 aa15.14■□□□□ 0.01
RTN3-205ENST00000356000 BCL2L15Q5TBC7 163 aa15.14■□□□□ 0.01
RTN3-205ENST00000356000 TMEM179Q6ZVK1 233 aa15.14■□□□□ 0.01
RTN3-205ENST00000356000 DPH6Q7L8W6 267 aa15.14■□□□□ 0.01
RTN3-205ENST00000356000 NLRC3Q7RTR2 1065 aa15.14■□□□□ 0.01
RTN3-205ENST00000356000 B3GNT7Q8NFL0 401 aa15.14■□□□□ 0.01
RTN3-205ENST00000356000 SFT2D1Q8WV19 159 aa15.14■□□□□ 0.01
RTN3-205ENST00000356000 CHTF18Q8WVB6 975 aa15.14■□□□□ 0.01
RTN3-205ENST00000356000 EXT2Q93063 718 aa15.14■□□□□ 0.01
RTN3-205ENST00000356000 KCNC2Q96PR1 638 aa15.14■□□□□ 0.01
RTN3-205ENST00000356000 NIFKQ9BYG3 293 aaKnown RBP15.14■□□□□ 0.01
RTN3-205ENST00000356000 SIK2Q9H0K1 926 aa15.14■□□□□ 0.01
RTN3-205ENST00000356000 CRISPLD1Q9H336 500 aa15.14■□□□□ 0.01
RTN3-205ENST00000356000 ACTL8Q9H568 366 aa15.14■□□□□ 0.01
RTN3-205ENST00000356000 PPIEQ9UNP9 301 aaKnown RBP15.14■□□□□ 0.01
RTN3-205ENST00000356000 SAMHD1Q9Y3Z3 626 aaKnown RBP15.14■□□□□ 0.01
RTN3-205ENST00000356000 CFAP20Q9Y6A4 193 aaKnown RBP15.14■□□□□ 0.01
RTN3-205ENST00000356000 CASP8AP2Q9UKL3 1982 aa15.14■□□□□ 0.01
RTN3-205ENST00000356000 GNRH1P01148 92 aa15.14■□□□□ 0.01
RTN3-205ENST00000356000 PTBP1P26599 531 aaKnown RBP eCLIP15.14■□□□□ 0.015e-7■■■■□ 22.4
RTN3-205ENST00000356000 MATKP42679 507 aa15.14■□□□□ 0.01
RTN3-205ENST00000356000 PRMT2P55345 433 aa15.14■□□□□ 0.01
RTN3-205ENST00000356000 CELF3Q5SZQ8 465 aaKnown RBP15.14■□□□□ 0.01
RTN3-205ENST00000356000 LCLAT1Q6UWP7 414 aa15.14■□□□□ 0.01
RTN3-205ENST00000356000 BEND4Q6ZU67 534 aa15.14■□□□□ 0.01
RTN3-205ENST00000356000 SPATA2LQ8IUW3 424 aaPredicted RBP15.14■□□□□ 0.01
RTN3-205ENST00000356000 ZBTB18Q99592 522 aa15.14■□□□□ 0.01
RTN3-205ENST00000356000 MED18Q9BUE0 208 aa15.14■□□□□ 0.01
RTN3-205ENST00000356000 HEBP1Q9NRV9 189 aa15.14■□□□□ 0.01
RTN3-205ENST00000356000 POMT2Q9UKY4 750 aa15.14■□□□□ 0.01
RTN3-205ENST00000356000 ITGB8P26012 769 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 PREPP48147 710 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 ALDH9A1P49189 494 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 OPCMLQ14982 345 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 P2RY14Q15391 338 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 PLA1AQ53H76 456 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 RTP2Q5QGT7 225 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 HECTD2Q5U5R9 776 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 NOTUMQ6P988 496 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 TRIM69Q86WT6 500 aa15.13■□□□□ 0.01
RTN3-205ENST00000356000 MIB1Q86YT6 1006 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms