RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 ABHD13Q7L211 337 aa14.4□□□□□ -0.1
PRKN-201ENST00000338468 NDUFAF7Q7L592 441 aa14.4□□□□□ -0.1
PRKN-201ENST00000338468 PEX11GQ96HA9 241 aa14.4□□□□□ -0.1
PRKN-201ENST00000338468 RBCK1Q9BYM8 510 aa14.4□□□□□ -0.1
PRKN-201ENST00000338468 PITHD1Q9GZP4 211 aaPredicted RBP14.4□□□□□ -0.1
PRKN-201ENST00000338468 ZNF700Q9H0M5 742 aa14.4□□□□□ -0.1
PRKN-201ENST00000338468 C5AR2Q9P296 337 aa14.4□□□□□ -0.1
PRKN-201ENST00000338468 LRIT2A6NDA9 550 aa14.39□□□□□ -0.11
PRKN-201ENST00000338468 SYCE1LA8MT33 242 aa14.39□□□□□ -0.11
PRKN-201ENST00000338468 KRT38O76015 456 aa14.39□□□□□ -0.11
PRKN-201ENST00000338468 SORBS2O94875 1100 aaKnown RBP14.39□□□□□ -0.11
PRKN-201ENST00000338468 CELA2AP08217 269 aa14.39□□□□□ -0.11
PRKN-201ENST00000338468 RHAGQ02094 409 aa14.39□□□□□ -0.11
PRKN-201ENST00000338468 CHIT1Q13231 466 aa14.39□□□□□ -0.11
PRKN-201ENST00000338468 NAA30Q147X3 362 aaPredicted RBP14.39□□□□□ -0.11
PRKN-201ENST00000338468 PFKFB4Q16877 469 aa14.39□□□□□ -0.11
PRKN-201ENST00000338468 ADPRMQ3LIE5 342 aa14.39□□□□□ -0.11
PRKN-201ENST00000338468 IGFL3Q6UXB1 125 aa14.39□□□□□ -0.11
PRKN-201ENST00000338468 KRT78Q8N1N4 520 aa14.39□□□□□ -0.11
PRKN-201ENST00000338468 Q8NA96 180 aa14.39□□□□□ -0.11
PRKN-201ENST00000338468 PSMF1Q92530 271 aa14.39□□□□□ -0.11
PRKN-201ENST00000338468 MS4A6EQ96DS6 147 aa14.39□□□□□ -0.11
PRKN-201ENST00000338468 PTCD3Q96EY7 689 aaKnown RBP14.39□□□□□ -0.11
PRKN-201ENST00000338468 IMMP1LQ96LU5 166 aa14.39□□□□□ -0.11
PRKN-201ENST00000338468 EFCAB11Q9BUY7 163 aa14.39□□□□□ -0.11
PRKN-201ENST00000338468 MFRPQ9BY79 579 aa14.39□□□□□ -0.11
PRKN-201ENST00000338468 RHBGQ9H310 441 aa14.39□□□□□ -0.11
PRKN-201ENST00000338468 G3BP2Q9UN86 482 aaKnown RBP14.39□□□□□ -0.11
PRKN-201ENST00000338468 IKBKGQ9Y6K9 419 aa14.39□□□□□ -0.11
PRKN-201ENST00000338468 PRRC2CQ9Y520 2896 aaKnown RBP14.39□□□□□ -0.11
PRKN-201ENST00000338468 NSG1A0A0A6YYJ2 146 aa14.38□□□□□ -0.11
PRKN-201ENST00000338468 IGHV3-20A0A0C4DH32 117 aa14.38□□□□□ -0.11
PRKN-201ENST00000338468 EXOC1LA0A1B0GW35 172 aa14.38□□□□□ -0.11
PRKN-201ENST00000338468 PCDH17O14917 1159 aa14.38□□□□□ -0.11
PRKN-201ENST00000338468 DPM1O60762 260 aa14.38□□□□□ -0.11
PRKN-201ENST00000338468 CLEC3AO75596 197 aa14.38□□□□□ -0.11
PRKN-201ENST00000338468 CDC123O75794 336 aaPredicted RBP14.38□□□□□ -0.11
PRKN-201ENST00000338468 CYC1P08574 325 aa14.38□□□□□ -0.11
PRKN-201ENST00000338468 C8orf89P0DMQ9 161 aa14.38□□□□□ -0.11
PRKN-201ENST00000338468 CNTFP26441 200 aa14.38□□□□□ -0.11
PRKN-201ENST00000338468 GSTM2P28161 218 aa14.38□□□□□ -0.11
PRKN-201ENST00000338468 ALDH18A1P54886 795 aaKnown RBP14.38□□□□□ -0.11
PRKN-201ENST00000338468 MLLT10P55197 1068 aa14.38□□□□□ -0.11
PRKN-201ENST00000338468 IRF8Q02556 426 aa14.38□□□□□ -0.11
PRKN-201ENST00000338468 SLC29A2Q14542 456 aa14.38□□□□□ -0.11
PRKN-201ENST00000338468 MINDY4Q4G0A6 757 aa14.38□□□□□ -0.11
PRKN-201ENST00000338468 TEX35Q5T0J7 233 aa14.38□□□□□ -0.11
PRKN-201ENST00000338468 SLC6A19Q695T7 634 aa14.38□□□□□ -0.11
PRKN-201ENST00000338468 JMJD6Q6NYC1 403 aaPredicted RBP14.38□□□□□ -0.11
PRKN-201ENST00000338468 ADGRD1Q6QNK2 874 aa14.38□□□□□ -0.11
PRKN-201ENST00000338468 IGFL2Q6UWQ7 119 aa14.38□□□□□ -0.11
PRKN-201ENST00000338468 TAOK1Q7L7X3 1001 aa14.38□□□□□ -0.11
PRKN-201ENST00000338468 HPS6Q86YV9 775 aa14.38□□□□□ -0.11
PRKN-201ENST00000338468 EIF1ADQ8N9N8 165 aaKnown RBP14.38□□□□□ -0.11
PRKN-201ENST00000338468 TTLQ8NG68 377 aa14.38□□□□□ -0.11
PRKN-201ENST00000338468 GAL3ST3Q96A11 431 aa14.38□□□□□ -0.11
PRKN-201ENST00000338468 THOC3Q96J01 351 aaKnown RBP14.38□□□□□ -0.11
PRKN-201ENST00000338468 SEC16BQ96JE7 1060 aa14.38□□□□□ -0.11
PRKN-201ENST00000338468 VPS50Q96JG6 964 aa14.38□□□□□ -0.11
PRKN-201ENST00000338468 QRFPRQ96P65 431 aa14.38□□□□□ -0.11
PRKN-201ENST00000338468 OR1F2PQ96R84 312 aa14.38□□□□□ -0.11
PRKN-201ENST00000338468 WDR77Q9BQA1 342 aaPredicted RBP14.38□□□□□ -0.11
PRKN-201ENST00000338468 LHPPQ9H008 270 aa14.38□□□□□ -0.11
PRKN-201ENST00000338468 OPTCQ9UBM4 332 aa14.38□□□□□ -0.11
PRKN-201ENST00000338468 A0A0G2JN53 185 aa14.37□□□□□ -0.11
PRKN-201ENST00000338468 URADA6NGE7 173 aa14.37□□□□□ -0.11
PRKN-201ENST00000338468 SIX3O95343 332 aaPredicted RBP14.37□□□□□ -0.11
PRKN-201ENST00000338468 ALPPP05187 535 aa14.37□□□□□ -0.11
PRKN-201ENST00000338468 FHP07954 510 aa14.37□□□□□ -0.11
PRKN-201ENST00000338468 SNRPAP09012 282 aaKnown RBP14.37□□□□□ -0.11
PRKN-201ENST00000338468 SBK3P0C264 359 aa14.37□□□□□ -0.11
PRKN-201ENST00000338468 PRR35P0CG20 571 aa14.37□□□□□ -0.11
PRKN-201ENST00000338468 GFAPP14136 432 aa14.37□□□□□ -0.11
PRKN-201ENST00000338468 IL10P22301 178 aa14.37□□□□□ -0.11
PRKN-201ENST00000338468 STXBP1P61764 594 aaKnown RBP14.37□□□□□ -0.11
PRKN-201ENST00000338468 PCBP2Q15366 365 aaKnown RBP eCLIP14.37□□□□□ -0.11
PRKN-201ENST00000338468 MFSD4BQ5TF39 518 aa14.37□□□□□ -0.11
PRKN-201ENST00000338468 NIPAL1Q6NVV3 410 aa14.37□□□□□ -0.11
PRKN-201ENST00000338468 KLC3Q6P597 504 aa14.37□□□□□ -0.11
PRKN-201ENST00000338468 TIFABQ6ZNK6 161 aa14.37□□□□□ -0.11
PRKN-201ENST00000338468 CPEB2Q7Z5Q1 589 aaKnown RBP14.37□□□□□ -0.11
PRKN-201ENST00000338468 ANKRD37Q7Z713 158 aa14.37□□□□□ -0.11
PRKN-201ENST00000338468 LAS2Q8IYD9 372 aa14.37□□□□□ -0.11
PRKN-201ENST00000338468 CA13Q8N1Q1 262 aa14.37□□□□□ -0.11
PRKN-201ENST00000338468 TMEM151AQ8N4L1 468 aa14.37□□□□□ -0.11
PRKN-201ENST00000338468 TEX9Q8N6V9 391 aa14.37□□□□□ -0.11
PRKN-201ENST00000338468 PLPP5Q8NEB5 264 aa14.37□□□□□ -0.11
PRKN-201ENST00000338468 TSLPQ969D9 159 aa14.37□□□□□ -0.11
PRKN-201ENST00000338468 TBC1D20Q96BZ9 403 aa14.37□□□□□ -0.11
PRKN-201ENST00000338468 CLK4Q9HAZ1 481 aaKnown RBP14.37□□□□□ -0.11
PRKN-201ENST00000338468 CPSF2Q9P2I0 782 aaKnown RBP14.37□□□□□ -0.11
PRKN-201ENST00000338468 XPR1Q9UBH6 696 aa14.37□□□□□ -0.11
PRKN-201ENST00000338468 PLEKHB1Q9UF11 243 aaPredicted RBP14.37□□□□□ -0.11
PRKN-201ENST00000338468 CSAG2Q9Y5P2 127 aa14.37□□□□□ -0.11
PRKN-201ENST00000338468 ICE1Q9Y2F5 2266 aa14.36□□□□□ -0.11
PRKN-201ENST00000338468 ANKDD1BA6NHY2 528 aa14.36□□□□□ -0.11
PRKN-201ENST00000338468 FAM227AF5H4B4 570 aa14.36□□□□□ -0.11
PRKN-201ENST00000338468 E2F3O00716 465 aa14.36□□□□□ -0.11
PRKN-201ENST00000338468 ERI3O43414 337 aaKnown RBP14.36□□□□□ -0.11
PRKN-201ENST00000338468 SEC24DO94855 1032 aaPredicted RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms