RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 FGF13Q92913 245 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 FOXJ1Q92949 421 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 BORCS5Q969J3 196 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 HEBP1Q9NRV9 189 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 B3GALT2O43825 422 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 AIREO43918 545 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 OR6A2O95222 327 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 KLF8O95600 359 aaPredicted RBP6.06□□□□□ -1.44
PRKDC-202ENST00000338368 NUDT6P53370 316 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 GRHL2Q6ISB3 625 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 RNF130Q86XS8 419 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 DPP10Q8N608 796 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 GEMIN6Q8WXD5 167 aaKnown RBP6.06□□□□□ -1.44
PRKDC-202ENST00000338368 EHD3Q9NZN3 535 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 A0A1B0GW55 424 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 A0A1W2PPW3 197 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 RASAL1O95294 804 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 DUX4L2P0CJ85 424 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 DUX4L3P0CJ86 424 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 DUX4L4P0CJ87 422 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 DUX4L5P0CJ88 424 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 DUX4L6P0CJ89 424 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 DUX4L7P0CJ90 424 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 PRG2P13727 222 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 CSNK2BP67870 215 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 RPA4Q13156 261 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 FADDQ13158 208 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 VN1R5Q7Z5H4 357 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 IPCEF1Q8WWN9 437 aaPredicted RBP6.05□□□□□ -1.44
PRKDC-202ENST00000338368 NEIL2Q969S2 332 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 DTD2Q96FN9 168 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 ZNF696Q9H7X3 374 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 TM9SF3Q9HD45 589 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 DUX4Q9UBX2 424 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 CCL26Q9Y258 94 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 NUP205Q92621 2012 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 POLR2CP19387 275 aaPredicted RBP6.05□□□□□ -1.44
PRKDC-202ENST00000338368 CYP27C1Q4G0S4 372 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 ZNF311Q5JNZ3 666 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 PPP1R14BQ96C90 147 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 TOR4AQ9NXH8 423 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 POFUT2Q9Y2G5 429 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 TAF1P21675 1872 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 ALPPP05187 535 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 LASP1Q14847 261 aaKnown RBP6.05□□□□□ -1.44
PRKDC-202ENST00000338368 CRB2Q5IJ48 1285 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 COX18Q8N8Q8 333 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 KLHL25Q9H0H3 589 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 SCN9AQ15858 1988 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 GLOD5A6NK44 160 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 DRD2P14416 443 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 ITPKBP27987 946 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 OXTRP30559 389 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 FMO3P31513 532 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 ITGA1P56199 1179 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 KLHL12Q53G59 568 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 SLC17A9Q9BYT1 436 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 LIN28AQ9H9Z2 209 aaKnown RBP6.05□□□□□ -1.44
PRKDC-202ENST00000338368 H3BNH8 94 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 GALK1P51570 392 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 KIAA1614Q5VZ46 1190 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 NETO1Q8TDF5 533 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 HDAC2Q92769 488 aaKnown RBP6.05□□□□□ -1.44
PRKDC-202ENST00000338368 DPH7Q9BTV6 452 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 TIMMDC1Q9NPL8 285 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 FOCADQ5VW36 1801 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 LSM1O15116 133 aaKnown RBP6.05□□□□□ -1.44
PRKDC-202ENST00000338368 MFN2O95140 757 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 ALOX5P09917 674 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 C5orf22Q49AR2 442 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 RAB2BQ8WUD1 216 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 ZNF480Q8WV37 535 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 ALPK1Q96QP1 1244 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 ACPTQ9BZG2 426 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 POLR2J3Q9H1A7 115 aaKnown RBP6.05□□□□□ -1.44
PRKDC-202ENST00000338368 TPK1Q9H3S4 243 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 ADAM30Q9UKF2 790 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 TRPM7Q96QT4 1865 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 C1orf226A1L170 272 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 ABATP80404 500 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 COMMD6Q7Z4G1 85 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 RNF175Q8N4F7 328 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 C1GALT1C1Q96EU7 318 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 CNPPD1Q9BV87 410 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 C11orf16Q9NQ32 467 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 NUMBLQ9Y6R0 609 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 ALAS2P22557 587 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 ADGRG5Q8IZF4 528 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 GJD3Q8N144 294 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 RASGEF1AQ8N9B8 481 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 POC5Q8NA72 575 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 PSMA8Q8TAA3 256 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 GTF2H4Q92759 462 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 KAT8Q9H7Z6 458 aaKnown RBP6.05□□□□□ -1.44
PRKDC-202ENST00000338368 PAK6Q9NQU5 681 aaPredicted RBP6.05□□□□□ -1.44
PRKDC-202ENST00000338368 FAM118AQ9NWS6 357 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 CXXC1Q9P0U4 656 aaPredicted RBP6.05□□□□□ -1.44
PRKDC-202ENST00000338368 XIRP1Q702N8 1843 aaKnown RBP6.05□□□□□ -1.44
PRKDC-202ENST00000338368 GTPBP1O00178 669 aaKnown RBP6.05□□□□□ -1.44
PRKDC-202ENST00000338368 OR7A17O14581 309 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms