RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 TLE3Q04726 772 aa15.71■□□□□ 0.11
PDLIM1-201ENST00000329399 CLN3Q13286 438 aa15.71■□□□□ 0.11
PDLIM1-201ENST00000329399 DOC2AQ14183 400 aa15.71■□□□□ 0.11
PDLIM1-201ENST00000329399 CCSMST1Q4G0I0 132 aa15.71■□□□□ 0.11
PDLIM1-201ENST00000329399 MED27Q6P2C8 311 aa15.71■□□□□ 0.11
PDLIM1-201ENST00000329399 BLOC1S3Q6QNY0 202 aa15.71■□□□□ 0.11
PDLIM1-201ENST00000329399 KRT78Q8N1N4 520 aa15.71■□□□□ 0.11
PDLIM1-201ENST00000329399 OR2T11Q8NH01 316 aa15.71■□□□□ 0.11
PDLIM1-201ENST00000329399 DNAJB8Q8NHS0 232 aa15.71■□□□□ 0.11
PDLIM1-201ENST00000329399 SLC5A11Q8WWX8 675 aa15.71■□□□□ 0.11
PDLIM1-201ENST00000329399 UTP4Q969X6 686 aaKnown RBP15.71■□□□□ 0.11
PDLIM1-201ENST00000329399 OR4K3Q96R72 315 aa15.71■□□□□ 0.11
PDLIM1-201ENST00000329399 TAAR9Q96RI9 348 aa15.71■□□□□ 0.11
PDLIM1-201ENST00000329399 ZBTB18Q99592 522 aa15.71■□□□□ 0.11
PDLIM1-201ENST00000329399 HOPXQ9BPY8 73 aaPredicted RBP15.71■□□□□ 0.11
PDLIM1-201ENST00000329399 SPRY4Q9C004 299 aa15.71■□□□□ 0.11
PDLIM1-201ENST00000329399 NT5DC2Q9H857 520 aa15.71■□□□□ 0.11
PDLIM1-201ENST00000329399 SPHK1Q9NYA1 384 aa15.71■□□□□ 0.11
PDLIM1-201ENST00000329399 CCDC167Q9P0B6 97 aa15.71■□□□□ 0.11
PDLIM1-201ENST00000329399 SEMA5BQ9P283 1151 aa15.71■□□□□ 0.11
PDLIM1-201ENST00000329399 TDRKHQ9Y2W6 561 aaKnown RBP15.71■□□□□ 0.11
PDLIM1-201ENST00000329399 ATRXP46100 2492 aa15.71■□□□□ 0.11
PDLIM1-201ENST00000329399 B4E171 279 aa15.71■□□□□ 0.1
PDLIM1-201ENST00000329399 FFAR3O14843 346 aa15.71■□□□□ 0.1
PDLIM1-201ENST00000329399 GPR42O15529 346 aa15.71■□□□□ 0.1
PDLIM1-201ENST00000329399 PDYNP01213 254 aa15.71■□□□□ 0.1
PDLIM1-201ENST00000329399 ANKRD34CP0C6C1 535 aa15.71■□□□□ 0.1
PDLIM1-201ENST00000329399 FOLR1P15328 257 aa15.71■□□□□ 0.1
PDLIM1-201ENST00000329399 JAK1P23458 1154 aa15.71■□□□□ 0.1
PDLIM1-201ENST00000329399 TSPAN7P41732 249 aa15.71■□□□□ 0.1
PDLIM1-201ENST00000329399 PIK3CBP42338 1070 aa15.71■□□□□ 0.1
PDLIM1-201ENST00000329399 HTR6P50406 440 aa15.71■□□□□ 0.1
PDLIM1-201ENST00000329399 RAB28P51157 221 aa15.71■□□□□ 0.1
PDLIM1-201ENST00000329399 KCNK10P57789 538 aa15.71■□□□□ 0.1
PDLIM1-201ENST00000329399 FOXM1Q08050 763 aa15.71■□□□□ 0.1
PDLIM1-201ENST00000329399 TRMT5Q32P41 509 aaKnown RBP15.71■□□□□ 0.1
PDLIM1-201ENST00000329399 PRAMEF13Q5VWM6 474 aa15.71■□□□□ 0.1
PDLIM1-201ENST00000329399 NXPE4Q6UWF7 544 aa15.71■□□□□ 0.1
PDLIM1-201ENST00000329399 PRSS42Q7Z5A4 293 aa15.71■□□□□ 0.1
PDLIM1-201ENST00000329399 NET1Q7Z628 596 aaPredicted RBP15.71■□□□□ 0.1
PDLIM1-201ENST00000329399 LAS2Q8IYD9 372 aa15.71■□□□□ 0.1
PDLIM1-201ENST00000329399 DSELQ8IZU8 1212 aa15.71■□□□□ 0.1
PDLIM1-201ENST00000329399 C2orf73Q8N5S3 287 aaPredicted RBP15.71■□□□□ 0.1
PDLIM1-201ENST00000329399 ZNF248Q8NDW4 579 aa15.71■□□□□ 0.1
PDLIM1-201ENST00000329399 WDR20Q8TBZ3 569 aa15.71■□□□□ 0.1
PDLIM1-201ENST00000329399 STARD8Q92502 1023 aa15.71■□□□□ 0.1
PDLIM1-201ENST00000329399 ZDHHC12Q96GR4 267 aa15.71■□□□□ 0.1
PDLIM1-201ENST00000329399 IL17FQ96PD4 163 aa15.71■□□□□ 0.1
PDLIM1-201ENST00000329399 MENTQ9BUN1 341 aa15.71■□□□□ 0.1
PDLIM1-201ENST00000329399 KLHL25Q9H0H3 589 aa15.71■□□□□ 0.1
PDLIM1-201ENST00000329399 SRMSQ9H3Y6 488 aa15.71■□□□□ 0.1
PDLIM1-201ENST00000329399 ZNF768Q9H5H4 540 aaKnown RBP15.71■□□□□ 0.1
PDLIM1-201ENST00000329399 SSUH2Q9Y2M2 353 aa15.71■□□□□ 0.1
PDLIM1-201ENST00000329399 PTGDR2Q9Y5Y4 395 aa15.71■□□□□ 0.1
PDLIM1-201ENST00000329399 BOD1L1Q8NFC6 3051 aa15.7■□□□□ 0.1
PDLIM1-201ENST00000329399 ADAMTS20P59510 1910 aa15.7■□□□□ 0.1
PDLIM1-201ENST00000329399 SEC16AO15027 2179 aa15.7■□□□□ 0.1
PDLIM1-201ENST00000329399 A0A1W2PP18 115 aa15.7■□□□□ 0.1
PDLIM1-201ENST00000329399 E7EQ34 232 aa15.7■□□□□ 0.1
PDLIM1-201ENST00000329399 AIM2O14862 343 aa15.7■□□□□ 0.1
PDLIM1-201ENST00000329399 KLK10O43240 276 aa15.7■□□□□ 0.1
PDLIM1-201ENST00000329399 PRMT3O60678 531 aa15.7■□□□□ 0.1
PDLIM1-201ENST00000329399 SEC22BO75396 215 aa15.7■□□□□ 0.1
PDLIM1-201ENST00000329399 CCNDBP1O95273 360 aa15.7■□□□□ 0.1
PDLIM1-201ENST00000329399 ITGAXP20702 1163 aa15.7■□□□□ 0.1
PDLIM1-201ENST00000329399 GSTM2P28161 218 aa15.7■□□□□ 0.1
PDLIM1-201ENST00000329399 MLLT3P42568 568 aaPredicted RBP15.7■□□□□ 0.1
PDLIM1-201ENST00000329399 NUDT2P50583 147 aa15.7■□□□□ 0.1
PDLIM1-201ENST00000329399 CLNS1AP54105 237 aaKnown RBP15.7■□□□□ 0.1
PDLIM1-201ENST00000329399 ABATP80404 500 aa15.7■□□□□ 0.1
PDLIM1-201ENST00000329399 RCAN2Q14206 197 aa15.7■□□□□ 0.1
PDLIM1-201ENST00000329399 THEMIS2Q5TEJ8 643 aa15.7■□□□□ 0.1
PDLIM1-201ENST00000329399 PGM2L1Q6PCE3 622 aa15.7■□□□□ 0.1
PDLIM1-201ENST00000329399 AMIGO1Q86WK6 493 aa15.7■□□□□ 0.1
PDLIM1-201ENST00000329399 C17orf64Q86WR6 236 aa15.7■□□□□ 0.1
PDLIM1-201ENST00000329399 FAM20CQ8IXL6 584 aa15.7■□□□□ 0.1
PDLIM1-201ENST00000329399 FAM13CQ8NE31 585 aa15.7■□□□□ 0.1
PDLIM1-201ENST00000329399 OR2L8Q8NGY9 312 aa15.7■□□□□ 0.1
PDLIM1-201ENST00000329399 FLVCR1-AS1Q8TAF5 88 aa15.7■□□□□ 0.1
PDLIM1-201ENST00000329399 KCNE4Q8WWG9 221 aa15.7■□□□□ 0.1
PDLIM1-201ENST00000329399 NEIL2Q969S2 332 aa15.7■□□□□ 0.1
PDLIM1-201ENST00000329399 SLC41A2Q96JW4 573 aa15.7■□□□□ 0.1
PDLIM1-201ENST00000329399 MARK4Q96L34 752 aa15.7■□□□□ 0.1
PDLIM1-201ENST00000329399 THTPAQ9BU02 230 aa15.7■□□□□ 0.1
PDLIM1-201ENST00000329399 SIRT5Q9NXA8 310 aa15.7■□□□□ 0.1
PDLIM1-201ENST00000329399 AKAP7Q9P0M2 348 aaPredicted RBP15.7■□□□□ 0.1
PDLIM1-201ENST00000329399 VPS29Q9UBQ0 182 aa15.7■□□□□ 0.1
PDLIM1-201ENST00000329399 SNRNP200O75643 2136 aaKnown RBP15.69■□□□□ 0.1
PDLIM1-201ENST00000329399 TEX51A0A1B0GUA7 166 aa15.69■□□□□ 0.1
PDLIM1-201ENST00000329399 ANGPT2O15123 496 aa15.69■□□□□ 0.1
PDLIM1-201ENST00000329399 MYO1DO94832 1006 aa15.69■□□□□ 0.1
PDLIM1-201ENST00000329399 PVRP15151 417 aa15.69■□□□□ 0.1
PDLIM1-201ENST00000329399 ZNF28P17035 718 aa15.69■□□□□ 0.1
PDLIM1-201ENST00000329399 NELFEP18615 380 aaKnown RBP15.69■□□□□ 0.1
PDLIM1-201ENST00000329399 WT1P19544 449 aaPredicted RBP15.69■□□□□ 0.1
PDLIM1-201ENST00000329399 PEBP1P30086 187 aaKnown RBP15.69■□□□□ 0.1
PDLIM1-201ENST00000329399 POLR2JP52435 117 aaKnown RBP15.69■□□□□ 0.1
PDLIM1-201ENST00000329399 SLC25A3Q00325 362 aa15.69■□□□□ 0.1
PDLIM1-201ENST00000329399 COL9A2Q14055 689 aaPredicted RBP15.69■□□□□ 0.1
PDLIM1-201ENST00000329399 TCHHL1Q5QJ38 904 aaPredicted RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms